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Gene: HOMER2 (homer scaffold protein 2) Chlorocebus sabaeus

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Symbol:

HOMER2

Name:

homer scaffold protein 2

RGD ID:

18633663

Description:

ENCODES a protein that exhibits glutamate receptor binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN behavioral response to cocaine (inferred); calcium-mediated signaling (inferred); G protein-coupled glutamate receptor signaling pathway (inferred); ASSOCIATED WITH amenorrhea (ortholog); autosomal dominant nonsyndromic deafness 68 (ortholog); Bloom syndrome (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

homer protein homolog 2; homer scaffolding protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	29	2,667,718 - 2,810,238 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	29	2,706,134 - 2,803,372 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	44,281,540 - 44,425,488 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HOMER2	Green Monkey	amenorrhea		ISO	HOMER2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Primary amenorrhea	ClinVar	PMID:21681106
HOMER2	Green Monkey	autosomal dominant nonsyndromic deafness 68		ISO	HOMER2 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...
HOMER2	Green Monkey	Bloom syndrome		ISO	HOMER2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Bloom syndrome	ClinVar	PMID:28492532
HOMER2	Green Monkey	colorectal cancer		ISO	HOMER2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial colorectal cancer	ClinVar	PMID:28492532
HOMER2	Green Monkey	genetic disease		ISO	HOMER2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 and PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HOMER2	Green Monkey	Cocaine-Related Disorders		ISO	HOMER2 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:15545022

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HOMER2	Green Monkey	autosomal dominant nonsyndromic deafness 68		ISO	HOMER2 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HOMER2	Green Monkey	behavioral response to cocaine	acts_upstream_of_or_within	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	calcium-mediated signaling	acts_upstream_of_or_within	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	G protein-coupled glutamate receptor signaling pathway	involved_in	IEA	InterPro:IPR044100	150520179		InterPro	GO_REF:0000002
HOMER2	Green Monkey	negative regulation of calcineurin-NFAT signaling cascade	involved_in	IEA	UniProtKB:Q9NSB8 and ensembl:ENSP00000407634	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	negative regulation of interleukin-2 production	involved_in	IEA	UniProtKB:Q9NSB8 and ensembl:ENSP00000407634	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	regulation of G protein-coupled receptor signaling pathway	acts_upstream_of_or_within	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	sensory perception of sound	involved_in	IEA	UniProtKB:Q9NSB8 more ...	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HOMER2	Green Monkey	apical part of cell	located_in	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
HOMER2	Green Monkey	cytoplasm	located_in	IEA	UniProtKB:Q9NSB8 more ...	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	cytosol	located_in	IEA	UniProtKB:Q9NSB8 and ensembl:ENSP00000407634	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	dendrite		ISO	Homer2 (Rattus norvegicus)	9068941		RGD	PMID:15944415 and REF_RGD_ID:2302220
HOMER2	Green Monkey	glutamatergic synapse	is_active_in	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	neuronal cell body		ISO	Homer2 (Rattus norvegicus)	9068941		RGD	PMID:15944415 and REF_RGD_ID:2302220
HOMER2	Green Monkey	plasma membrane	located_in	ISO	Homer2 (Rattus norvegicus)	9068941	PMID:17584991	UniProt	PMID:17584991 and REF_RGD_ID:25671399
HOMER2	Green Monkey	postsynaptic density	located_in	IEA	UniProtKB-SubCell:SL-0297	150520179		UniProt	GO_REF:0000044
HOMER2	Green Monkey	postsynaptic density	is_active_in	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	stereocilium tip	located_in	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	synapse	located_in	IEA	UniProtKB-KW:KW-0770	150520179		UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
HOMER2	Green Monkey	actin binding	enables	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107
HOMER2	Green Monkey	G protein-coupled glutamate receptor binding	enables	IEA	InterPro:IPR044100 and InterPro:IPR045027	150520179		InterPro	GO_REF:0000002
HOMER2	Green Monkey	glutamate receptor binding		ISO	Grm1 (Rattus norvegicus) and Grm5 (Rattus norvegicus)	9068941		RGD	PMID:9727012 and REF_RGD_ID:632975
HOMER2	Green Monkey	identical protein binding		ISO	Homer2 (Rattus norvegicus)	9068941	homodimerization	RGD	PMID:9727012 and REF_RGD_ID:632975
HOMER2	Green Monkey	protein binding		ISO	Ubxn1 (Rattus norvegicus)	9068941		RGD	PMID:15944415 and REF_RGD_ID:2302220
HOMER2	Green Monkey	protein binding	enables	ISO	PR:P97772	9068941	PMID:10493740 and PMID:9808458	MGI	PMID:10493740 and PMID:9808458
HOMER2	Green Monkey	protein binding	enables	ISO	UniProtKB:Q9BRK4 and UniProtKB:Q9H4P4	9068941	PMID:25416956	IntAct	PMID:25416956
HOMER2	Green Monkey	protein binding	enables	ISO	UniProtKB:Q8WX93-2 and UniProtKB:Q9P2A4	9068941	PMID:32296183	IntAct	PMID:32296183
HOMER2	Green Monkey	protein binding	enables	ISO	UniProtKB:O95644 more ...	9068941	PMID:18218901	UniProt	PMID:18218901
HOMER2	Green Monkey	protein binding	enables	ISO	UniProtKB:Q6WQJ1	9068941	PMID:17584991	UniProt	PMID:17584991 and REF_RGD_ID:25671399
HOMER2	Green Monkey	protein domain specific binding		ISO	Homer2 (Rattus norvegicus)	9068941	CC and UBX domains	RGD	PMID:15944415 and REF_RGD_ID:2302220
HOMER2	Green Monkey	protein-containing complex binding		ISO	Homer1 (Rattus norvegicus)	9068941	heterodimerization	RGD	PMID:9727012 and REF_RGD_ID:632975
HOMER2	Green Monkey	synaptic receptor adaptor activity	enables	IEA	UniProtKB:Q9QWW1 and ensembl:ENSMUSP00000146787	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

HOMER2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	29	2,667,718 - 2,810,238 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	29	2,706,134 - 2,803,372 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	44,281,540 - 44,425,488 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

HOMER2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	82,834,661 - 82,986,157 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	82,836,946 - 82,986,153 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	83,517,735 - 83,621,472 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	81,314,789 - 81,412,477 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	81,314,788 - 81,412,477	NCBI
Celera	15	60,965,171 - 61,062,906 (+)	NCBI		Celera
Cytogenetic Map	15	q25.2	NCBI
HuRef	15	59,787,302 - 59,884,988 (-)	NCBI		HuRef
CHM1_1	15	83,259,957 - 83,363,087 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	80,701,241 - 80,850,554 (-)	NCBI		T2T-CHM13v2.0

Homer2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	81,250,229 - 81,356,673 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	81,250,229 - 81,357,275 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	81,600,481 - 81,706,925 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	81,600,481 - 81,707,527 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	88,745,367 - 88,851,811 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	81,483,228 - 81,580,639 (-)	NCBI		MGSCv36	mm8
Celera	7	79,009,788 - 79,104,812 (-)	NCBI		Celera
Cytogenetic Map	7	D3	NCBI
cM Map	7	45.71	NCBI

Homer2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	144,968,207 - 145,069,022 (-)	NCBI		GRCr8
mRatBN7.2	1	135,558,977 - 135,659,780 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	135,567,414 - 135,659,772 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	143,488,882 - 143,581,178 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	150,658,320 - 150,750,396 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	143,564,822 - 143,658,186 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	143,443,300 - 143,535,579 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	143,443,300 - 143,535,583 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	144,387,025 - 144,478,034 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	137,827,128 - 137,933,089 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	137,905,533 - 138,012,215 (-)	NCBI
Celera	1	127,618,673 - 127,711,006 (-)	NCBI		Celera
Cytogenetic Map	1	q31	NCBI

Homer2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	13,741,161 - 13,818,060 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	13,671,115 - 13,828,413 (+)	NCBI	ChiLan1.0	ChiLan1.0

HOMER2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	72,906,093 - 73,051,976 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	77,066,987 - 77,212,497 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	62,617,905 - 62,762,903 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	80,731,863 - 80,876,442 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	80,737,570 - 80,784,729 (-)	Ensembl	panpan1.1		panPan2

Homer2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	128,699,719 - 128,836,080 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936483	17,507,533 - 17,539,105 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936483	17,500,962 - 17,634,804 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HOMER2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	52,001,579 - 52,096,828 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	52,001,253 - 52,104,426 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	57,489,011 - 57,584,450 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Homer2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624768	18,635,283 - 18,721,984 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624768	18,626,353 - 18,751,279 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in HOMER2
3008 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20


RefSeq Transcripts	XM_007990232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007990233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007990234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007990235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007990236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007990237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007990238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037987783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037987784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000015387 ⟹ ENSCSAP00000013328

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	29	2,706,134 - 2,803,372 (+)	Ensembl

RefSeq Acc Id:

XM_007990232 ⟹ XP_007988423

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	29	2,667,718 - 2,804,068 (+)	NCBI
Vero_WHO_p1.0	NW_023666059	44,289,228 - 44,425,488 (-)	NCBI

Sequence:

show sequence

ATCACCTGATTTCCGCTTCCGGCGGGCTAATGTTGAGGGTGCCTGTCAAGTCTCGCGATAACTAAGGCTCGTCGTGTGGCTCGCTTTGCTACAGATCGCTTCTTCAAATACTGGCGCAACGCCCAGAG
CTCGATGAGGTGTGGGCAAGTAGCTGTCTGAAGGTGGATGATGCCCTCCATGCGCTTTCAGCCTGCCTGGTGGGTGGCCAGTCGAAAACGTCGCCGTCTATTAAGCTCCTTTGACTGGGAGCCGTGGA
CGGGTAGAGACGGAAGTTCTGGGAATCACCGGAGAAGGGAGGGAAAGGCTCCTTCGGCCGCCTGCTCCCGGCGTCTTCGTGGGGAACTGAGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTC
CAGATTGACCCCAACACCAAGAAGAACTGGATGCCTGCGAGCAAGCAGGCGGTCACCGTTTCCTACTTCTATGATGTCACAAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCAAGGTGATCAT
AAACAGCACAATTACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGCAGAGCCAACACGGTGTTTGGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTG
CAGAGAAATTCCAGGAGGTGAAAGAAGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAATCGAGACCTCAAGTGATCATTCCCAAGAATCTGGGCGTGAAACCCCATCTTCTACTCAGGCATCC
AGTGTCAATGGGACGGACGATGAAAAGGCCTCTCACACCGGTCCAGCCAACACGCACCTGAAGTCTGAGAATGATAAGCTGAAGATTGCCTTGACGCAGAGCGCTGCCAACGTGAAGAAATGGGAGAT
CGAGCTGCAGACCCTGCGGGAGAGCAATGCCCGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGTTCTCCATCTGCCGCGACGAGAATGACCGGCTCCGCAACA
AGATTGATGAGCTGGAAGAACAATGCAGTGAGATCAACAGAGAGAAGGAGAAGAACACACAACTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCTCCGAGAAAAGGAGACAGAGCTGAAAGATCTC
CGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGGCAGAGAGAGACAATCAAAACCTGGAAGACAAAGTGCGTTCCTTAAAGACAGACATTGA
GGAGAGCAAATACCGACAGCGCCACCTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGATGGGAAGATTGACGACCTGCATGACTTCCGCCGAGGCCTCTCCAAGCTGGGCACCGATAACTAGG
GCTGGCCGAGGCCCAGGCCCCGCCTGTGAGTCCCAAGCGTGTGTGCGAGACCAGATAGCTCTAGGACGTTCTTCTGTGTGCATTGCTTCTGTAAATGCAGGCGCAGTTTGTCGTGTTTCCAAACCAGT
TGTGCCGTCCACTCCTTTCCAGAATAGAAATCTCCTCTCGCTTCTCTGGCCTTGTGAGGTTGTGGACAACTGGAAGATTCTGACTCAGGAATCCAGAACTAGGTCTACCTTCAACATTTACGCAGTCA
GGGCAGGGATGTTTATATCTTTCATAAGGGCTGTTGCAACCATATGAACTGAAAAAATGCATTTTCTAATCCAAATATTGATATTCTTTACACCAGGCCATCAGGCTCCTTTTATCAAATAGCATTCA
GAGTATTTGAATGTCCATCAGGCACCAGCCCCGGGGGGCACAGAGAGAACAACATTCCTCTCCATCAACATCGAGAGGCTTTATTTAAAACAACTGTTTAGTGGAAACTTATTGAGAGATGGAAAACA
AGCTTCTGGTGGGTGCATTTTCTGACCCGGGAGTCGCCTGCAGCCACAATACTGCCCCTGCCCCCCAGTTTGTATGGTTGCGACAGTGTTCCTTTTCTTGGTTTTAATTTCTGAGCAGATGATTGTGC
TGTGGGAACAGCACACAGTGAGGGTGCCTAGCACAATGCCTGGCACTAAGTAGGTGCTTAATAAATGTTTGTTTTACTAAA

hide sequence

RefSeq Acc Id:

XM_007990233 ⟹ XP_007988424

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	29	2,667,718 - 2,810,238 (+)	NCBI
Vero_WHO_p1.0	NW_023666059	44,281,540 - 44,425,488 (-)	NCBI

Sequence:

show sequence

ATCACCTGATTTCCGCTTCCGGCGGGCTAATGTTGAGGGTGCCTGTCAAGTCTCGCGATAACTAAGGCTCGTCGTGTGGCTCGCTTTGCTACAGATCGCTTCTTCAAATACTGGCGCAACGCCCAGAG
CTCGATGAGGTGTGGGCAAGTAGCTGTCTGAAGGTGGATGATGCCCTCCATGCGCTTTCAGCCTGCCTGGTGGGTGGCCAGTCGAAAACGTCGCCGTCTATTAAGCTCCTTTGACTGGGAGCCGTGGA
CGGGTAGAGACGGAAGTTCTGGGAATCACCGGAGAAGGGAGGGAAAGGCTCCTTCGGCCGCCTGCTCCCGGCGTCTTCGTGGGGAACTGAGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTC
CAGATTGACCCCAACACCAAGAAGAACTGGATGCCTGCGAGCAAGCAGGCGGTCACCGTTTCCTACTTCTATGATGTCACAAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCAAGGTGATCAT
AAACAGCACAATTACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGCAGAGCCAACACGGTGTTTGGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTG
CAGAGAAATTCCAGGAGGTGAAAGAAGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAATCGAGACCTCAAGTGATCATTCCCAAGAATCTGGGCGTGAAACCCCATCTTCTACTCAGGCATCC
AGTGTCAATGGGACGGACGATGAAAAGGCCTCTCACACCGGTCCAGCCAACACGCACCTGAAGTCTGAGAATGATAAGCTGAAGATTGCCTTGACGCAGAGCGCTGCCAACGTGAAGAAATGGGAGAT
CGAGCTGCAGACCCTGCGGGAGAGCAATGCCCGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGTTCTCCATCTGCCGCGACGAGAATGACCGGCTCCGCAACA
AGATTGATGAGCTGGAAGAACAATGCAGTGAGATCAACAGAGAGAAGGAGAAGAACACACAACTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCTCCGAGAAAAGGAGACAGAGCTGAAAGATCTC
CGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGGCAGAGAGAGACAATCAAAACCTGGAAGACAAAGTGCGTTCCTTAAAGACAGACATTGA
GGAGAGCAAATACCGACAGCGCCACCTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGATGGGAAGATTGACGACCTGCATGACTTCCGCCGAGGCCTCTCCAAGCTGGGCACCGATAACTAGG
GCTGGCCGAGGCCCAGGCCCCGCCTTTAATTCTCTGATCTGGCTGGGCGT

hide sequence

RefSeq Acc Id:

XM_007990234 ⟹ XP_007988425

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	29	2,667,718 - 2,804,068 (+)	NCBI
Vero_WHO_p1.0	NW_023666059	44,289,227 - 44,425,468 (-)	NCBI

Sequence:

show sequence

ATCACCTGATTTCCGCTTCCGGCGGGCTAATGTTGAGGGTGCCTGTCAAGTCTCGCGATAACTA
AGGCTCGTCGTGTGGCTCGCTTTGCTACAGATCGCTTCTTCAAATACTGGCGCAACGCCCAGAGCTCGATGAGGTGTGGGCAAGTAGCTGTCTGAAGGTGGATGATGCCCTCCATGCGCTTTCAGCCT
GCCTGGTGGGTGGCCAGTCGAAAACGTCGCCGTCTATTAAGCTCCTTTGACTGGGAGCCGTGGACGGGTAGAGACGGAAGTTCTGGGAATCACCGGAGAAGGGAGGGAAAGGCTCCTTCGGCCGCCTG
CTCCCGGCGTCTTCGTGGGGAACTGAGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTCCAGATTGACCCCAACACCAAGAAGAACTGGATGCCTGCGAGCAAGCAGGCGGTCACCGTTTCCT
ACTTCTATGATGTCACAAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCAAGGTGATCATAAACAGCACAATTACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCC
GACAGCAGAGCCAACACGGTGTTTGGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTCCAGGAGGTGAAAGAAGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAAT
CGAGACCTCAAGTGATCATTCCCAAGCATCCAGTGTCAATGGGACGGACGATGAAAAGGCCTCTCACACCGGTCCAGCCAACACGCACCTGAAGTCTGAGAATGATAAGCTGAAGATTGCCTTGACGC
AGAGCGCTGCCAACGTGAAGAAATGGGAGATCGAGCTGCAGACCCTGCGGGAGAGCAATGCCCGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGTTCTCCATC
TGCCGCGACGAGAATGACCGGCTCCGCAACAAGATTGATGAGCTGGAAGAACAATGCAGTGAGATCAACAGAGAGAAGGAGAAGAACACACAACTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCT
CCGAGAAAAGGAGACAGAGCTGAAAGATCTCCGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGGCAGAGAGAGACAATCAAAACCTGGAAG
ACAAAGTGCGTTCCTTAAAGACAGACATTGAGGAGAGCAAATACCGACAGCGCCACCTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGATGGGAAGATTGACGACCTGCATGACTTCCGCCGA
GGCCTCTCCAAGCTGGGCACCGATAACTAGGGCTGGCCGAGGCCCAGGCCCCGCCTGTGAGTCCCAAGCGTGTGTGCGAGACCAGATAGCTCTAGGACGTTCTTCTGTGTGCATTGCTTCTGTAAATG
CAGGCGCAGTTTGTCGTGTTTCCAAACCAGTTGTGCCGTCCACTCCTTTCCAGAATAGAAATCTCCTCTCGCTTCTCTGGCCTTGTGAGGTTGTGGACAACTGGAAGATTCTGACTCAGGAATCCAGA
ACTAGGTCTACCTTCAACATTTACGCAGTCAGGGCAGGGATGTTTATATCTTTCATAAGGGCTGTTGCAACCATATGAACTGAAAAAATGCATTTTCTAATCCAAATATTGATATTCTTTACACCAGG
CCATCAGGCTCCTTTTATCAAATAGCATTCAGAGTATTTGAATGTCCATCAGGCACCAGCCCCGGGGGGCACAGAGAGAACAACATTCCTCTCCATCAACATCGAGAGGCTTTATTTAAAACAACTGT
TTAGTGGAAACTTATTGAGAGATGGAAAACAAGCTTCTGGTGGGTGCATTTTCTGACCCGGGAGTCGCCTGCAGCCACAATACTGCCCCTGCCCCCCAGTTTGTATGGTTGCGACAGTGTTCCTTTTC
TTGGTTTTAATTTCTGAGCAGATGATTGTGCTGTGGGAACAGCACACAGTGAGGGTGCCTAGCACAATGCCTGGCACTAAGTAGGTGCTTAATAAATGTTTGTTTTACTAAA

hide sequence

RefSeq Acc Id:

XM_007990236 ⟹ XP_007988427

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	29	2,706,037 - 2,804,074 (+)	NCBI
Vero_WHO_p1.0	NW_023666059	44,289,228 - 44,388,452 (-)	NCBI

Sequence:

show sequence

CGCCTGGCGGCGGTGGCGGCGGCGGCAGCGGCAGCAGTGGCAGCCGCGCAGCCCTGCGGAATGGAGCGGCGCCGGGGCTGAGCCGGGCGCGCACGGGCCGCCGCATGTGCCGCGCGGGGAGCGGCTCT
CTAGCGGGCGGAGAGCGAGCGCGAAAGGCCCCGTCGGAGCGGCCGCCGGAGCAGCGCCGGAGATGGGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTCCAGATTGACCCCAACACCAAGAAG
AACTGGATGCCTGCGAGCAAGCAGGCGGTCACCGTTTCCTACTTCTATGATGTCACAAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCAAGGTGATCATAAACAGCACAATTACACCGAATAT
GACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGCAGAGCCAACACGGTGTTTGGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTCCAGGAGGTGAAAG
AAGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAATCGAGACCTCAAGTGATCATTCCCAAGAATCTGGGCGTGAAACCCCATCTTCTACTCAGGCATCCAGTGTCAATGGGACGGACGATGAA
AAGGCCTCTCACACCGGTCCAGCCAACACGCACCTGAAGTCTGAGAATGATAAGCTGAAGATTGCCTTGACGCAGAGCGCTGCCAACGTGAAGAAATGGGAGATCGAGCTGCAGACCCTGCGGGAGAG
CAATGCCCGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGTTCTCCATCTGCCGCGACGAGAATGACCGGCTCCGCAACAAGATTGATGAGCTGGAAGAACAAT
GCAGTGAGATCAACAGAGAGAAGGAGAAGAACACACAACTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCTCCGAGAAAAGGAGACAGAGCTGAAAGATCTCCGAAAACAAAGTGAAATCATACCT
CAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGGCAGAGAGAGACAATCAAAACCTGGAAGACAAAGTGCGTTCCTTAAAGACAGACATTGAGGAGAGCAAATACCGACAGCGCCA
CCTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGATGGGAAGATTGACGACCTGCATGACTTCCGCCGAGGCCTCTCCAAGCTGGGCACCGATAACTAGGGCTGGCCGAGGCCCAGGCCCCGCC
TGTGAGTCCCAAGCGTGTGTGCGAGACCAGATAGCTCTAGGACGTTCTTCTGTGTGCATTGCTTCTGTAAATGCAGGCGCAGTTTGTCGTGTTTCCAAACCAGTTGTGCCGTCCACTCCTTTCCAGAA
TAGAAATCTCCTCTCGCTTCTCTGGCCTTGTGAGGTTGTGGACAACTGGAAGATTCTGACTCAGGAATCCAGAACTAGGTCTACCTTCAACATTTACGCAGTCAGGGCAGGGATGTTTATATCTTTCA
TAAGGGCTGTTGCAACCATATGAACTGAAAAAATGCATTTTCTAATCCAAATATTGATATTCTTTACACCAGGCCATCAGGCTCCTTTTATCAAATAGCATTCAGAGTATTTGAATGTCCATCAGGCA
CCAGCCCCGGGGGGCACAGAGAGAACAACATTCCTCTCCATCAACATCGAGAGGCTTTATTTAAAACAACTGTTTAGTGGAAACTTATTGAGAGATGGAAAACAAGCTTCTGGTGGGTGCATTTTCTG
ACCCGGGAGTCGCCTGCAGCCACAATACTGCCCCTGCCCCCCAGTTTGTATGGTTGCGACAGTGTTCCTTTTCTTGGTTTTAATTTCTGAGCAGATGATTGTGCTGTGGGAACAGCACACAGTGAGGG
TGCCTAGCACAATGCCTGGCACTAAGTAGGTGCTTAATAAATGTTTGTTTTACTAAATGTGTA

hide sequence

RefSeq Acc Id:

XM_007990237 ⟹ XP_007988428

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	29	2,706,037 - 2,804,068 (+)	NCBI
Vero_WHO_p1.0	NW_023666059	44,289,228 - 44,388,449 (-)	NCBI

Sequence:

show sequence

CGCCTGGCGGCGGTGGCGGCGGCGGCAGCGGCAGCAGTGGCAGCCGCGCAGCCCTGCGGAATGG
AGCGGCGCCGGGGCTGAGCCGGGCGCGCACGGGCCGCCGCATGTGCCGCGCGGGGAGCGGCTCTCTAGCGGGCGGAGAGCGAGCGCGAAAGGCCCCGTCGGAGCGGCCGCCGGAGCAGCGCCGGAGAT
GGGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTCCAGATTGACCCCAACACCAAGAAGAACTGGATGCCTGCGAGCAAGCAGGCGGTCACCGTTTCCTACTTCTATGATGTCACAAGGAACA
GCTATCGGATCATCAGTGTGGACGGAGCCAAGGTGATCATAAACAGCACAATTACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGCAGAGCCAACACGGTGTTT
GGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTCCAGGAGGTGAAAGAAGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAATCGAGACCTCAAGTGATCATTCCCA
AGCATCCAGTGTCAATGGGACGGACGATGAAAAGGCCTCTCACACCGGTCCAGCCAACACGCACCTGAAGTCTGAGAATGATAAGCTGAAGATTGCCTTGACGCAGAGCGCTGCCAACGTGAAGAAAT
GGGAGATCGAGCTGCAGACCCTGCGGGAGAGCAATGCCCGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGTTCTCCATCTGCCGCGACGAGAATGACCGGCTC
CGCAACAAGATTGATGAGCTGGAAGAACAATGCAGTGAGATCAACAGAGAGAAGGAGAAGAACACACAACTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCTCCGAGAAAAGGAGACAGAGCTGAA
AGATCTCCGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGGCAGAGAGAGACAATCAAAACCTGGAAGACAAAGTGCGTTCCTTAAAGACAG
ACATTGAGGAGAGCAAATACCGACAGCGCCACCTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGATGGGAAGATTGACGACCTGCATGACTTCCGCCGAGGCCTCTCCAAGCTGGGCACCGAT
AACTAGGGCTGGCCGAGGCCCAGGCCCCGCCTGTGAGTCCCAAGCGTGTGTGCGAGACCAGATAGCTCTAGGACGTTCTTCTGTGTGCATTGCTTCTGTAAATGCAGGCGCAGTTTGTCGTGTTTCCA
AACCAGTTGTGCCGTCCACTCCTTTCCAGAATAGAAATCTCCTCTCGCTTCTCTGGCCTTGTGAGGTTGTGGACAACTGGAAGATTCTGACTCAGGAATCCAGAACTAGGTCTACCTTCAACATTTAC
GCAGTCAGGGCAGGGATGTTTATATCTTTCATAAGGGCTGTTGCAACCATATGAACTGAAAAAATGCATTTTCTAATCCAAATATTGATATTCTTTACACCAGGCCATCAGGCTCCTTTTATCAAATA
GCATTCAGAGTATTTGAATGTCCATCAGGCACCAGCCCCGGGGGGCACAGAGAGAACAACATTCCTCTCCATCAACATCGAGAGGCTTTATTTAAAACAACTGTTTAGTGGAAACTTATTGAGAGATG
GAAAACAAGCTTCTGGTGGGTGCATTTTCTGACCCGGGAGTCGCCTGCAGCCACAATACTGCCCCTGCCCCCCAGTTTGTATGGTTGCGACAGTGTTCCTTTTCTTGGTTTTAATTTCTGAGCAGATG
ATTGTGCTGTGGGAACAGCACACAGTGAGGGTGCCTAGCACAATGCCTGGCACTAAGTAGGTGCTTAATAAATGTTTGTTTTACTAAA

hide sequence

RefSeq Acc Id:

XM_037987783 ⟹ XP_037843711

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666059	44,284,118 - 44,425,488 (-)	NCBI

RefSeq Acc Id:

XM_037987784 ⟹ XP_037843712

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666059	44,289,227 - 44,388,251 (-)	NCBI


Protein RefSeqs	XP_007988423	(Get FASTA)	NCBI Sequence Viewer
	XP_007988424	(Get FASTA)	NCBI Sequence Viewer
	XP_007988425	(Get FASTA)	NCBI Sequence Viewer
	XP_007988427	(Get FASTA)	NCBI Sequence Viewer
	XP_007988428	(Get FASTA)	NCBI Sequence Viewer
	XP_037843711	(Get FASTA)	NCBI Sequence Viewer
	XP_037843712	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000013328
	ENSCSAP00000013328.1

RefSeq Acc Id:	XP_007988424 ⟸ XM_007990233
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007988423 ⟸ XM_007990232
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007988425 ⟸ XM_007990234
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_007988427 ⟸ XM_007990236
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_007988428 ⟸ XM_007990237
- Peptide Label:	isoform X5
- UniProtKB:	A0A0D9RXI9 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000017295	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000015387.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.1700	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	Homer	UniProtKB/TrEMBL
	Homer_EVH1	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	WH1/EVH1_dom	UniProtKB/TrEMBL
NCBI Gene	HOMER2	ENTREZGENE
PANTHER	PTHR10918	UniProtKB/TrEMBL
Pfam	WH1	UniProtKB/TrEMBL
PROSITE	WH1	UniProtKB/TrEMBL
SMART	WH1	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
UniProt	A0A0D9RXI9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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