MAFA (MAF bZIP transcription factor A) - Rat Genome Database

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Gene: MAFA (MAF bZIP transcription factor A) Homo sapiens
Analyze
Symbol: MAFA
Name: MAF bZIP transcription factor A
RGD ID: 1604438
HGNC Page HGNC:23145
Description: Enables DNA-binding transcription factor activity and sequence-specific double-stranded DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II and response to glucose. Located in nucleus. Biomarker of type 2 diabetes mellitus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hMafA; INSDM; pancreatic beta-cell-specific transcriptional activator; RIPE3b1; RIPE3b1 activator; RIPE3b1 factor; transcription factor MafA; transcription factor RIPE3b1; v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388143,428,064 - 143,430,732 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8143,419,182 - 143,430,732 (-)EnsemblGRCh38hg38GRCh38
GRCh378144,510,234 - 144,512,902 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368144,582,658 - 144,583,719 (-)NCBINCBI36Build 36hg18NCBI36
Celera8140,823,405 - 140,824,466 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8139,762,838 - 139,764,567 (-)NCBIHuRef
CHM1_18144,550,697 - 144,553,066 (-)NCBICHM1_1
T2T-CHM13v2.08144,577,736 - 144,580,401 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumandiabetes mellitus treatmentISOMafa (Rattus norvegicus)13506744 RGD 
MAFAHumanExperimental Diabetes Mellitus treatmentISOMafa (Mus musculus)13506743 RGD 
MAFAHumantype 2 diabetes mellitus  ISOMafa (Mus musculus)13506745protein:decreased expression:beta cells of pancreaRGD 
MAFAHumantype 2 diabetes mellitus  IEP 13506742protein:decreased expression:islet:RGD 
1 to 9 of 9 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumanBrown-Vialetto-Van Laere syndrome 2  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Brown-Vialetto-van Laere syndrome 2ClinVarPMID:20301336 more ...
MAFAHumanCombined Cerebellar and Peripheral Ataxia with Hearing Loss and Diabetes Mellitus  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Ataxia more ...ClinVarPMID:25741868
MAFAHumanepidermolysis bullosa simplex with muscular dystrophy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Epidermolysis bullosa simplex 5B and with muscular dystrophyClinVarPMID:20301336 more ...
MAFAHumanepidermolysis bullosa simplex with muscular dystrophy  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Epidermolysis bullosa simplex 5B and with muscular dystrophyClinVarPMID:28492532
MAFAHumanholoprosencephaly  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Holoprosencephaly sequenceClinVarPMID:28492532
MAFAHumanIslet Cell Adenomatosis  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Islet cell adenomatosisClinVarPMID:25741868
MAFAHumanIslet Cell Adenomatosis  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Islet cell adenomatosisClinVarPMID:25741868 and PMID:29339498
MAFAHumanIslet Cell Adenomatosis  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Islet cell adenomatosisClinVarPMID:25741868 and PMID:35406570
MAFAHumanRecombinant Chromosome 8 Syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Recombinant 8 syndromeClinVarPMID:31690835
1 to 9 of 9 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumanmaturity-onset diabetes of the young  ISSMafa (Mus musculus)13592920OMIM:606391MouseDO 
MAFAHumantype 2 diabetes mellitus  ISSMafa (Mus musculus)13592920OMIM:125853 more ...MouseDO 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumanIslet Cell Adenomatosis  IAGP 7240710 OMIM 

1 to 20 of 95 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHuman2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMafa (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MAFA mRNACTDPMID:24058054 and PMID:24680724
MAFAHuman2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOMafa (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of MAFA mRNACTDPMID:33387578
MAFAHuman2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOMafa (Rattus norvegicus)64804642 more ...CTDPMID:32109520
MAFAHuman3-aminobenzamide multiple interactionsISOMafa (Rattus norvegicus)64804643-aminobenzamide inhibits the reaction [Glucose results in decreased expression of MAFA mRNA] and 3-aminobenzamide inhibits the reaction [Glucose results in decreased expression of MAFA protein]CTDPMID:16505238
MAFAHuman3-aminobenzamide multiple interactionsEXP 64804643-aminobenzamide inhibits the reaction [Glucose inhibits the reaction [MAFA protein binds to INS promoter]]CTDPMID:16505238
MAFAHuman4,4'-sulfonyldiphenol increases expressionISOMafa (Mus musculus)6480464bisphenol S results in increased expression of MAFA mRNACTDPMID:35457000
MAFAHuman4,4'-sulfonyldiphenol decreases expressionEXP 6480464bisphenol S results in decreased expression of MAFA mRNACTDPMID:35457000
MAFAHuman4-phenylbutyric acid multiple interactionsISOMafa (Mus musculus)64804644-phenylbutyric acid inhibits the reaction [LEPR gene mutant form results in decreased expression of MAFA mRNA]CTDPMID:23274897
MAFAHuman6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide multiple interactionsISOMafa (Rattus norvegicus)6480464[6-chloro-2 more ...CTDPMID:22968147
MAFAHumanacrylamide decreases expressionISOMafa (Rattus norvegicus)6480464Acrylamide results in decreased expression of MAFA mRNACTDPMID:28959563
MAFAHumanactinomycin D multiple interactionsEXP 6480464[Dactinomycin co-treated with nutlin 3] results in increased expression of MAFA mRNACTDPMID:38460933
MAFAHumanaldehydo-D-glucose increases expressionISOMafa (Rattus norvegicus)6480464Glucose results in increased expression of MAFA mRNACTDPMID:22558381
MAFAHumanaldehydo-D-glucose affects expressionISOMafa (Rattus norvegicus)6480464Glucose affects the expression of MAFA mRNACTDPMID:24349266
MAFAHumanaldehydo-D-glucose multiple interactionsISOMafa (Mus musculus)6480464IL1B protein inhibits the reaction [Glucose results in increased expression of MAFA mRNA] more ...CTDPMID:22558381
MAFAHumanaldehydo-D-glucose increases expressionISOMafa (Mus musculus)6480464Glucose results in increased expression of MAFA mRNACTDPMID:22558381
MAFAHumanaldehydo-D-glucose multiple interactionsEXP 64804643 more ...CTDPMID:16505238
MAFAHumanaldehydo-D-glucose multiple interactionsISOMafa (Rattus norvegicus)64804643 more ...CTDPMID:16505238 and PMID:22558381
MAFAHumanall-trans-retinoic acid multiple interactionsISOMafa (Mus musculus)6480464[mono-(2-ethylhexyl)phthalate co-treated with Tretinoin] results in decreased expression of MAFA mRNACTDPMID:36189433
MAFAHumanalpha-Zearalanol multiple interactionsISOMafa (Rattus norvegicus)6480464[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of MAFA mRNACTDPMID:35163327
MAFAHumanalpha-Zearalanol decreases expressionISOMafa (Rattus norvegicus)6480464Zeranol results in decreased expression of MAFA mRNACTDPMID:35163327

1 to 20 of 95 rows

Biological Process
1 to 10 of 10 rows

  
1 to 10 of 10 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumanchromatin located_inISAtfclass:1.1.3150520179 NTNU_SBGO_REF:0000113
MAFAHumannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
MAFAHumannucleus is_active_inIBAFB:FBgn0000964 more ...150520179 GO_CentralGO_REF:0000033
MAFAHumannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
MAFAHumannucleus located_inIDA 150520179 PMID:12368292UniProtPMID:12368292
MAFAHumannucleus located_inIEAUniProtKB:Q8CF90 and ensembl:ENSMUSP00000054226150520179 EnsemblGO_REF:0000107

Molecular Function
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumanDNA binding enablesIEAInterPro:IPR004826 and InterPro:IPR008917150520179 InterProGO_REF:0000002
MAFAHumanDNA binding enablesIDA 150520179 PMID:12368292UniProtPMID:12368292
MAFAHumanDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
MAFAHumanDNA binding enablesIEAUniProtKB:Q8CF90 and ensembl:ENSMUSP00000054226150520179 EnsemblGO_REF:0000107
MAFAHumanDNA-binding transcription activator activity, RNA polymerase II-specific enablesIEAUniProtKB:Q8CF90 and ensembl:ENSMUSP00000054226150520179 EnsemblGO_REF:0000107
MAFAHumanDNA-binding transcription factor activity enablesTAS 150520179 PMID:12368292UniProtPMID:12368292
MAFAHumanDNA-binding transcription factor activity enablesIDA 150520179 PMID:17941991BHF-UCLPMID:17941991
MAFAHumanDNA-binding transcription factor activity enablesIEAInterPro:IPR004827 more ...150520179 InterProGO_REF:0000002
MAFAHumanDNA-binding transcription factor activity, RNA polymerase II-specific enablesISAtfclass:1.1.3150520179 NTNU_SBGO_REF:0000113
MAFAHumanDNA-binding transcription factor activity, RNA polymerase II-specific enablesIBAMGI:104555 more ...150520179 GO_CentralGO_REF:0000033
MAFAHumanprotein binding  ISOKat2b (Rattus norvegicus)9068941 RGDPMID:18042454 and REF_RGD_ID:9590276
MAFAHumanRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIBAMGI:104555 more ...150520179 GO_CentralGO_REF:0000033
MAFAHumanRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIEAUniProtKB:Q8CF90 and ensembl:ENSMUSP00000054226150520179 EnsemblGO_REF:0000107
MAFAHumansequence-specific double-stranded DNA binding enablesIDA 150520179 PMID:28473536ARUK-UCLPMID:28473536
1 to 14 of 14 rows

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumanmaturity-onset diabetes of the young pathway  IEA 6907045 KEGGhsa:04950
MAFAHumantype 2 diabetes mellitus pathway   IEA 6907045 KEGGhsa:04930
1 to 12 of 12 rows
1 to 12 of 12 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MAFAHumanArrhinencephaly  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: ARHINENCEPHALYClinVarPMID:28492532
MAFAHumanHoloprosencephaly  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: HoloprosencephalyClinVarPMID:28492532

#
Reference Title
Reference Citation
1. Both PAX4 and MAFA are expressed in a substantial proportion of normal human pancreatic alpha cells and deregulated in patients with type 2 diabetes. Bonnavion R, etal., PLoS One. 2013 Aug 27;8(8):e72194. doi: 10.1371/journal.pone.0072194. eCollection 2013.
2. Protein therapy using MafA fused to a polyarginine transduction domain attenuates glucose levels of streptozotocin-induced diabetic mice. Lu J, etal., Mol Med Rep. 2017 Jun;15(6):4041-4048. doi: 10.3892/mmr.2017.6536. Epub 2017 May 2.
3. Ebselen treatment prevents islet apoptosis, maintains intranuclear Pdx-1 and MafA levels, and preserves ß-cell mass and function in ZDF rats. Mahadevan J, etal., Diabetes. 2013 Oct;62(10):3582-8. doi: 10.2337/db13-0357. Epub 2013 Jun 25.
4. Regulation of MafA expression in pancreatic beta-cells in db/db mice with diabetes. Matsuoka TA, etal., Diabetes. 2010 Jul;59(7):1709-20. doi: 10.2337/db08-0693. Epub 2010 Apr 27.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:11416124   PMID:12011435   PMID:12368292   PMID:14973194   PMID:15664997   PMID:15664999   PMID:15665000   PMID:15993959   PMID:16847327   PMID:17636040   PMID:17941991   PMID:18042454  
PMID:18508668   PMID:18522939   PMID:18753309   PMID:18948074   PMID:19274049   PMID:19393272   PMID:19407223   PMID:19573128   PMID:20158571   PMID:20208071   PMID:20213756   PMID:21278380  
PMID:21278484   PMID:21873635   PMID:22761608   PMID:22847061   PMID:23660596   PMID:23863625   PMID:24157940   PMID:26180087   PMID:26546820   PMID:26781599   PMID:26904947   PMID:28473536  
PMID:28933784   PMID:29070792   PMID:29096722   PMID:29180619   PMID:29339498   PMID:30021884   PMID:31614335   PMID:31822558   PMID:33631146   PMID:34644565   PMID:34804002   PMID:35041347  
PMID:35575683   PMID:37028761   PMID:39189982  



MAFA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388143,428,064 - 143,430,732 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8143,419,182 - 143,430,732 (-)EnsemblGRCh38hg38GRCh38
GRCh378144,510,234 - 144,512,902 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368144,582,658 - 144,583,719 (-)NCBINCBI36Build 36hg18NCBI36
Celera8140,823,405 - 140,824,466 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8139,762,838 - 139,764,567 (-)NCBIHuRef
CHM1_18144,550,697 - 144,553,066 (-)NCBICHM1_1
T2T-CHM13v2.08144,577,736 - 144,580,401 (-)NCBIT2T-CHM13v2.0
Mafa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391575,617,350 - 75,620,170 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1575,617,339 - 75,620,077 (-)EnsemblGRCm39 Ensembl
GRCm381575,745,501 - 75,748,321 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1575,745,490 - 75,748,228 (-)EnsemblGRCm38mm10GRCm38
MGSCv371575,577,273 - 75,578,352 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361575,574,098 - 75,575,177 (-)NCBIMGSCv36mm8
Celera1577,247,539 - 77,247,977 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1534.82NCBI
Mafa
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,313,021 - 109,315,813 (-)NCBIGRCr8
mRatBN7.27107,432,292 - 107,435,084 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7107,433,605 - 107,434,690 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7109,171,427 - 109,174,218 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07111,395,100 - 111,397,891 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07111,341,011 - 111,343,802 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07116,779,368 - 116,781,815 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7116,780,681 - 116,781,766 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07116,670,579 - 116,673,032 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47113,707,043 - 113,708,128 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera7103,795,440 - 103,796,236 (-)NCBICelera
Cytogenetic Map7q34NCBI
Mafa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554542,135,484 - 2,136,560 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554542,134,340 - 2,136,962 (-)NCBIChiLan1.0ChiLan1.0
MAFA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27160,908,765 - 160,911,574 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18136,425,885 - 136,428,694 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08140,178,322 - 140,181,152 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
MAFA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11337,122,653 - 37,123,895 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1337,122,731 - 37,123,771 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1337,080,084 - 37,081,140 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01337,595,211 - 37,596,267 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1337,595,211 - 37,596,251 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11337,269,620 - 37,270,676 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01337,386,782 - 37,387,836 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01337,867,731 - 37,868,787 (-)NCBIUU_Cfam_GSD_1.0
Mafa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053031,258,281 - 1,260,665 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364708,684,393 - 8,685,475 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364708,684,392 - 8,686,758 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAFA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl41,090,874 - 1,093,600 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.141,090,018 - 1,093,600 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.241,173,340 - 1,175,218 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAFA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18137,647,459 - 137,650,169 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8137,648,746 - 137,649,804 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660392,253,402 - 2,256,090 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mafa
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473513,327,889 - 13,328,962 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473513,327,857 - 13,330,079 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in MAFA
53 total Variants

1 to 10 of 130 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 8q24.21-24.3(chr8:128220912-145049449)x3 copy number gain See cases [RCV000050830] Chr8:128220912..145049449 [GRCh38]
Chr8:129233158..146274835 [GRCh37]
Chr8:129302340..146245639 [NCBI36]
Chr8:8q24.21-24.3
pathogenic
GRCh38/hg38 8q23.3-24.3(chr8:113580402-145054634)x3 copy number gain See cases [RCV000050638] Chr8:113580402..145054634 [GRCh38]
Chr8:114592631..146280020 [GRCh37]
Chr8:114661807..146250824 [NCBI36]
Chr8:8q23.3-24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:95606052-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]|See cases [RCV000053677] Chr8:95606052..145054775 [GRCh38]
Chr8:96618280..146280161 [GRCh37]
Chr8:96687456..146250965 [NCBI36]
Chr8:8q22.1-24.3
pathogenic
GRCh38/hg38 8q24.13-24.3(chr8:124514090-145054634)x3 copy number gain See cases [RCV000053678] Chr8:124514090..145054634 [GRCh38]
Chr8:125526331..146280020 [GRCh37]
Chr8:125595512..146250824 [NCBI36]
Chr8:8q24.13-24.3
pathogenic
GRCh38/hg38 8q24.3(chr8:139447227-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053701]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053701]|See cases [RCV000053701] Chr8:139447227..145054775 [GRCh38]
Chr8:140459470..146280161 [GRCh37]
Chr8:140528652..146250965 [NCBI36]
Chr8:8q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:94682154-145068656)x3 copy number gain See cases [RCV000134353] Chr8:94682154..145068656 [GRCh38]
Chr8:95694382..146294042 [GRCh37]
Chr8:95763558..146264846 [NCBI36]
Chr8:8q22.1-24.3
pathogenic
GRCh38/hg38 8q24.3(chr8:143329374-143531855)x3 copy number gain See cases [RCV000134350] Chr8:143329374..143531855 [GRCh38]
Chr8:144411544..144614025 [GRCh37]
Chr8:144482919..144685168 [NCBI36]
Chr8:8q24.3
uncertain significance
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Predicted Target Of
Summary Value
Count of predictions:977
Count of miRNA genes:622
Interacting mature miRNAs:702
Transcripts:ENST00000333480, ENST00000528185
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597280789GWAS1376863_HX-11315 measurement QTL GWAS1376863 (human)3e-11X-11315 measurement8143428466143428467Human

PMC124472P1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh378144,511,675 - 144,512,576UniSTSGRCh37
Build 368144,582,818 - 144,583,719RGDNCBI36
Celera8140,823,565 - 140,824,466RGD
Cytogenetic Map8q24.3UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1074 2285 2718 2214 4542 1460 1996 4 387 1621 248 2145 6459 5911 48 3335 682 1568 1503 149



Ensembl Acc Id: ENST00000333480   ⟹   ENSP00000328364
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl8143,428,064 - 143,430,732 (-)Ensembl
Ensembl Acc Id: ENST00000528185
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl8143,419,182 - 143,429,898 (-)Ensembl
RefSeq Acc Id: NM_201589   ⟹   NP_963883
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh388143,428,064 - 143,430,732 (-)NCBI
GRCh378144,510,230 - 144,512,602 (-)ENTREZGENE
Build 368144,582,658 - 144,583,719 (-)NCBI Archive
HuRef8139,762,838 - 139,764,567 (-)ENTREZGENE
CHM1_18144,550,697 - 144,553,066 (-)NCBI
T2T-CHM13v2.08144,577,736 - 144,580,401 (-)NCBI
Sequence:
Protein RefSeqs NP_963883 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAL89527 (Get FASTA)   NCBI Sequence Viewer  
  BAC20389 (Get FASTA)   NCBI Sequence Viewer  
  BAJ04327 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000328364
  ENSP00000328364.2
GenBank Protein Q8NHW3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_963883   ⟸   NM_201589
- UniProtKB: Q8NHW3 (UniProtKB/Swiss-Prot),   D4Q8H3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000328364   ⟸   ENST00000333480
bZIP

Name Modeler Protein Id AA Range Protein Structure
AF-Q8NHW3-F1-model_v2 AlphaFold Q8NHW3 1-353 view protein structure



1 to 28 of 28 rows
Database
Acc Id
Source(s)
COSMIC MAFA COSMIC
Ensembl Genes ENSG00000182759 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000333480 ENTREZGENE
  ENST00000333480.3 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.170 UniProtKB/Swiss-Prot
GTEx ENSG00000182759 GTEx
HGNC ID HGNC:23145 ENTREZGENE
Human Proteome Map MAFA Human Proteome Map
InterPro bZIP UniProtKB/Swiss-Prot
  bZIP_Maf UniProtKB/Swiss-Prot
  bZIP_sf UniProtKB/Swiss-Prot
  Maf_TF_N UniProtKB/Swiss-Prot
  TF_DNA-bd_sf UniProtKB/Swiss-Prot
  Transciption_factor_Maf_fam UniProtKB/Swiss-Prot
KEGG Report hsa:389692 UniProtKB/Swiss-Prot
NCBI Gene 389692 ENTREZGENE
OMIM 610303 OMIM
PANTHER PTHR10129 UniProtKB/Swiss-Prot
  PTHR10129:SF30 UniProtKB/Swiss-Prot
Pfam bZIP_Maf UniProtKB/Swiss-Prot
  Maf_N UniProtKB/Swiss-Prot
PharmGKB PA134963361 PharmGKB
PROSITE BZIP UniProtKB/Swiss-Prot
SMART BRLZ UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47454 UniProtKB/Swiss-Prot
  SSF57959 UniProtKB/Swiss-Prot
UniProt D4Q8H3 ENTREZGENE, UniProtKB/TrEMBL
  MAFA_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
1 to 28 of 28 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-17 MAFA  MAF bZIP transcription factor A  MAFA  v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A  Symbol and/or name change 5135510 APPROVED
2013-07-16 MAFA  v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog A  MAFA  v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)  Symbol and/or name change 5135510 APPROVED