Sh3gl3 (SH3-domain GRB2-like 3) - Rat Genome Database

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Gene: Sh3gl3 (SH3-domain GRB2-like 3) Mus musculus
Analyze
Symbol: Sh3gl3
Name: SH3-domain GRB2-like 3
RGD ID: 1551861
MGI Page MGI
Description: Predicted to have identical protein binding activity and protein C-terminus binding activity. Involved in synaptic vesicle uncoating. Localizes to cytoplasm. Is expressed in several structures, including adrenal gland; central nervous system; dorsal aorta; peripheral nervous system; and testis. Orthologous to human SH3GL3 (SH3 domain containing GRB2 like 3, endophilin A3); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; endocytosis pathway; INTERACTS WITH 1,2-dimethylhydrazine; 4-hydroxyphenyl retinamide; arsenite(3-).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: EEN-B; EEN-B2; endophilin III; endophilin-3; endophilin-A3; MGC118269; SH3 domain protein 2 C2; SH3 domain protein 2C; SH3 domain-containing GRB2-like protein 3; Sh3d2; Sh3d2c; Sh3d2c2; SH3P; SH3P13
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Sh3d2c-ps1  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39781,824,544 - 81,956,628 (+)NCBIGRCm39mm39
GRCm39 Ensembl781,823,588 - 81,956,627 (+)Ensembl
GRCm38782,173,808 - 82,307,420 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl782,173,840 - 82,307,419 (+)EnsemblGRCm38mm10GRCm38
MGSCv37789,408,638 - 89,455,929 (+)NCBIGRCm37mm9NCBIm37
MGSCv36782,136,564 - 82,183,595 (+)NCBImm8
Celera779,583,452 - 79,715,386 (+)NCBICelera
Cytogenetic Map7D3NCBI
cM Map747.15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:9238627   PMID:9341169   PMID:9630982   PMID:9878254   PMID:10087302   PMID:10349636   PMID:10816441   PMID:11042159   PMID:11076861   PMID:11309660   PMID:11544199  
PMID:12034747   PMID:12456676   PMID:12477932   PMID:14610273   PMID:15978591   PMID:16141072   PMID:16141073   PMID:20064468   PMID:22099461   PMID:23187129   PMID:25471590   PMID:27720640  
PMID:29953872   PMID:32152276  


Genomics

Comparative Map Data
Sh3gl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39781,824,544 - 81,956,628 (+)NCBIGRCm39mm39
GRCm39 Ensembl781,823,588 - 81,956,627 (+)Ensembl
GRCm38782,173,808 - 82,307,420 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl782,173,840 - 82,307,419 (+)EnsemblGRCm38mm10GRCm38
MGSCv37789,408,638 - 89,455,929 (+)NCBIGRCm37mm9NCBIm37
MGSCv36782,136,564 - 82,183,595 (+)NCBImm8
Celera779,583,452 - 79,715,386 (+)NCBICelera
Cytogenetic Map7D3NCBI
cM Map747.15NCBI
SH3GL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1583,447,228 - 83,618,743 (+)EnsemblGRCh38hg38GRCh38
GRCh381583,447,123 - 83,618,743 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371584,116,093 - 84,287,495 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361581,907,287 - 82,078,495 (+)NCBINCBI36hg18NCBI36
Build 341581,907,286 - 82,078,495NCBI
Celera1560,298,989 - 60,470,347 (-)NCBI
Cytogenetic Map15q25.2NCBI
HuRef1560,379,941 - 60,551,319 (+)NCBIHuRef
CHM1_11583,857,593 - 84,029,128 (+)NCBICHM1_1
Sh3gl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21136,124,502 - 136,255,669 (+)NCBI
Rnor_6.0 Ensembl1144,069,638 - 144,200,397 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01144,069,641 - 144,200,402 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01145,001,327 - 145,131,961 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41138,398,336 - 138,529,056 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11138,476,741 - 138,607,462 (+)NCBI
Celera1128,174,057 - 128,303,475 (+)NCBICelera
Cytogenetic Map1q31NCBI
Sh3gl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541613,150,021 - 13,297,878 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541613,151,288 - 13,297,878 (-)NCBIChiLan1.0ChiLan1.0
SH3GL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11581,337,223 - 81,502,229 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1581,337,529 - 81,501,770 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01561,988,584 - 62,153,543 (-)NCBIMhudiblu_PPA_v0panPan3
SH3GL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1355,287,460 - 55,340,736 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl355,287,460 - 55,340,571 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha357,849,401 - 57,991,318 (+)NCBI
ROS_Cfam_1.0355,633,727 - 55,769,378 (+)NCBI
UMICH_Zoey_3.1355,141,227 - 55,277,053 (+)NCBI
UNSW_CanFamBas_1.0355,351,137 - 55,486,712 (+)NCBI
UU_Cfam_GSD_1.0355,688,264 - 55,825,678 (+)NCBI
Sh3gl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640128,158,006 - 128,283,492 (-)NCBI
SpeTri2.0NW_00493648318,051,023 - 18,176,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SH3GL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl751,377,618 - 51,540,296 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1751,381,091 - 51,514,253 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2756,871,306 - 57,006,768 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SH3GL3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1292,009,833 - 2,177,843 (-)NCBI
ChlSab1.1 Ensembl292,009,776 - 2,177,747 (-)Ensembl
Sh3gl3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476819,168,922 - 19,320,366 (+)NCBI

Position Markers
U58887  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38782,307,272 - 82,307,392UniSTSGRCm38
MGSCv37789,455,782 - 89,455,902UniSTSGRCm37
Celera779,715,239 - 79,715,359UniSTS
Cytogenetic Map7D2-3UniSTS
Whitehead/MRC_RH7904.38UniSTS
Sh3d2c2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38782,307,060 - 82,307,393UniSTSGRCm38
MGSCv37789,455,570 - 89,455,903UniSTSGRCm37
Celera779,715,027 - 79,715,360UniSTS
Cytogenetic Map7D2-3UniSTS
cM Map741.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7346321287493512Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76500000133900000Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718994869119886157Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719413473142366067Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730500000109400000Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73658059092745138Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736580590116817642Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73760000087400000Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined740024463103860803Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745512542119094307Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74873471382734859Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74950947983586207Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74954353083543642Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75147520685475345Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75147520685475345Mouse
13208555Lgth10_mbody length 10 (mouse)752000000126000000Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75250000086500000Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753600000143600000Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)755169841117223580Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75623976087493512Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)757300000134400000Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75767637391676604Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75767637391676604Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75767637391676604Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)762100000121800000Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)762100000124100000Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)762200000103100000Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76448567698485905Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76560000097300000Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765600000126900000Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)766139778100139778Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)766139778100139778Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76680000098700000Mouse
12801463Rta1_mretinal aging 1 (mouse)76751827989440781Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767640886101641032Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767640886101641032Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767640886101641032Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)768200000105800000Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)768200000119900000Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)768200000124600000Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)768200000125400000Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768716387102716494Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)770300000120900000Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770493929104494171Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772614164106614164Mouse
4142319Powg_mpost-ovarectomy weight gain (mouse)Not determined7320735792932955Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773400000126100000Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773500000143600000Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)774076757108076757Mouse
4142212Png1_mPostnatal growth 1 (mouse)Not determined7467637392745138Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)775200000122600000Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)775200000122600000Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775745007109745138Mouse
14746989Manh62_mmandible shape 62 (mouse)776093321110093321Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)779000000137300000Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80902474114902584Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780902474114902584Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)781200000127100000Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781600000124600000Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781800000126900000Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)782200000126900000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1780
Count of miRNA genes:578
Interacting mature miRNAs:724
Transcripts:ENSMUST00000032874, ENSMUST00000177883, ENSMUST00000177895, ENSMUST00000178526, ENSMUST00000179150, ENSMUST00000179318, ENSMUST00000179800, ENSMUST00000180183, ENSMUST00000180243
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001277954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001277955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_017400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC139213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC175489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC175660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC100453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE653420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE993218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM115813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01040896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01040903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MG954304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U58887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000032874   ⟹   ENSMUSP00000032874
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,174,796 - 82,307,419 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177883   ⟹   ENSMUSP00000137207
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,174,856 - 82,307,419 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177895   ⟹   ENSMUSP00000137570
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,174,950 - 82,307,419 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178526   ⟹   ENSMUSP00000137482
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,270,886 - 82,307,228 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179150
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,175,234 - 82,176,292 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179318   ⟹   ENSMUSP00000137621
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,173,840 - 82,307,087 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179800
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,174,842 - 82,270,038 (+)Ensembl
RefSeq Acc Id: ENSMUST00000180183
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,174,195 - 82,284,095 (+)Ensembl
RefSeq Acc Id: ENSMUST00000180243
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl782,175,156 - 82,284,158 (+)Ensembl
RefSeq Acc Id: NM_001277954   ⟹   NP_001264883
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,544 - 81,956,628 (+)NCBI
GRCm38782,174,796 - 82,307,420 (+)NCBI
Celera779,667,037 - 79,715,387 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001277955   ⟹   NP_001264884
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,544 - 81,956,628 (+)NCBI
GRCm38782,174,796 - 82,307,420 (+)NCBI
Celera779,667,037 - 79,715,387 (+)NCBI
Sequence:
RefSeq Acc Id: NM_017400   ⟹   NP_059096
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,544 - 81,956,628 (+)NCBI
GRCm38782,174,796 - 82,307,420 (+)NCBI
MGSCv37789,408,638 - 89,455,929 (+)RGD
Celera779,667,037 - 79,715,387 (+)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030242262   ⟹   XP_030098122
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,932 - 81,956,618 (+)NCBI
GRCm38782,175,184 - 82,307,410 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030242263   ⟹   XP_030098123
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,958 - 81,956,618 (+)NCBI
GRCm38782,175,210 - 82,307,410 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030242264   ⟹   XP_030098124
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,573 - 81,956,618 (+)NCBI
GRCm38782,174,820 - 82,307,410 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030242266   ⟹   XP_030098126
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,581 - 81,956,618 (+)NCBI
GRCm38782,174,822 - 82,307,410 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030242269   ⟹   XP_030098129
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,558 - 81,956,618 (+)NCBI
GRCm38782,174,810 - 82,307,410 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152822   ⟹   XP_036008715
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,580 - 81,956,618 (+)NCBI
RefSeq Acc Id: XM_036152823   ⟹   XP_036008716
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,983 - 81,956,618 (+)NCBI
RefSeq Acc Id: XM_036152824   ⟹   XP_036008717
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,824,581 - 81,956,618 (+)NCBI
RefSeq Acc Id: XM_036152825   ⟹   XP_036008718
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39781,825,787 - 81,956,618 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_059096   ⟸   NM_017400
- Peptide Label: isoform 1
- UniProtKB: Q62421 (UniProtKB/Swiss-Prot),   A0A0R4J0B8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264883   ⟸   NM_001277954
- Peptide Label: isoform 2
- UniProtKB: Q497N4 (UniProtKB/TrEMBL),   Q9CZV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001264884   ⟸   NM_001277955
- Peptide Label: isoform 3
- UniProtKB: Q9CZV7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030098129   ⟸   XM_030242269
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030098124   ⟸   XM_030242264
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030098126   ⟸   XM_030242266
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030098122   ⟸   XM_030242262
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030098123   ⟸   XM_030242263
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000032874   ⟸   ENSMUST00000032874
RefSeq Acc Id: ENSMUSP00000137482   ⟸   ENSMUST00000178526
RefSeq Acc Id: ENSMUSP00000137570   ⟸   ENSMUST00000177895
RefSeq Acc Id: ENSMUSP00000137207   ⟸   ENSMUST00000177883
RefSeq Acc Id: ENSMUSP00000137621   ⟸   ENSMUST00000179318
RefSeq Acc Id: XP_036008715   ⟸   XM_036152822
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036008717   ⟸   XM_036152824
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036008716   ⟸   XM_036152823
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036008718   ⟸   XM_036152825
- Peptide Label: isoform X4
Protein Domains
BAR   SH3

Promoters
RGD ID:8664647
Promoter ID:EPDNEW_M10355
Type:single initiation site
Name:Sh3gl3_1
Description:Mus musculus SH3-domain GRB2-like 3 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38782,269,718 - 82,269,778EPDNEW
RGD ID:6842011
Promoter ID:MM_KWN:51365
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:UC009ICY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36789,408,346 - 89,408,846 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:700011 AgrOrtholog
Ensembl Genes ENSMUSG00000030638 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032874 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000137207 UniProtKB/TrEMBL
  ENSMUSP00000137482 UniProtKB/TrEMBL
  ENSMUSP00000137570 UniProtKB/TrEMBL
  ENSMUSP00000137621 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032874 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000177883 UniProtKB/TrEMBL
  ENSMUST00000177895 UniProtKB/TrEMBL
  ENSMUST00000178526 UniProtKB/TrEMBL
  ENSMUST00000179318 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.20.1270.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AH/BAR_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BAR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Endophilin-A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Endophilin-A3_BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Endophilin_A_SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20408 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:700011 ENTREZGENE
NCBI Gene 20408 ENTREZGENE
PANTHER PTHR14167:SF45 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sh3gl3 PhenoGen
PRINTS SH3DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103657 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J0B8 ENTREZGENE, UniProtKB/TrEMBL
  J3QK75_MOUSE UniProtKB/TrEMBL
  J3QQ08_MOUSE UniProtKB/TrEMBL
  J3QQ44_MOUSE UniProtKB/TrEMBL
  Q497N4 ENTREZGENE, UniProtKB/TrEMBL
  Q62421 ENTREZGENE
  Q9CZV7 ENTREZGENE, UniProtKB/TrEMBL
  SH3G3_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8R0B7 UniProtKB/Swiss-Prot