SLA-7 (MHC class I antigen 7) - Rat Genome Database

Name: SLA-7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: SLA-7 (MHC class I antigen 7) Sus scrofa

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Symbol:

SLA-7

Name:

MHC class I antigen 7

RGD ID:

14123454

Description:

ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); beta-2-microglobulin binding (ortholog); peptide antigen binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class Ib (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class Ib (ortholog); negative regulation of natural killer cell cytokine production (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); megacolon (ortholog); FOUND IN cell surface (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog); INTERACTS WITH resveratrol

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

swine leukocyte antigen 7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	7	23,634,731 - 23,638,722 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	27,613,977 - 27,618,085 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	7	p1.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

megacolon (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

resveratrol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antigen processing and presentation of endogenous peptide antigen via MHC class Ib (ISO)

antigen processing and presentation of exogenous peptide antigen via MHC class Ib (ISO)

antigen processing and presentation of peptide antigen via MHC class I (IEA)

negative regulation of natural killer cell cytokine production (ISO)

negative regulation of natural killer cell degranulation (ISO)

negative regulation of natural killer cell mediated cytotoxicity (ISO)

negative regulation of T cell cytokine production (ISO)

positive regulation of natural killer cell cytokine production (ISO)

positive regulation of natural killer cell degranulation (ISO)

positive regulation of T cell mediated cytotoxicity (ISO)

Cellular Component

cell surface (ISO)

early endosome membrane (ISO)

endoplasmic reticulum (ISO)

Golgi membrane (ISO)

lumenal side of endoplasmic reticulum membrane (IEA)

lysosomal membrane (ISO)

membrane (IEA)

MHC class I protein complex (IEA)

MHC class Ib protein complex (ISO)

phagocytic vesicle membrane (IEA)

plasma membrane (ISO)

Molecular Function

14-3-3 protein binding (ISO)

beta-2-microglobulin binding (ISO)

peptide antigen binding (ISO)

protein binding (ISO)

TAP1 binding (ISO)

TAP2 binding (ISO)

References

Additional References at PubMed

PMID:11169259	PMID:14708575	PMID:14736397	PMID:15118849	PMID:21645289	PMID:21906102	PMID:30032202

Genomics

Comparative Map Data

SLA-7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	7	23,634,731 - 23,638,722 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	27,613,977 - 27,618,085 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	7	p1.1	NCBI

HLA-F
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	29,723,434 - 29,738,532 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	29,722,775 - 29,738,528 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	29,691,211 - 29,695,073 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	29,799,096 - 29,803,052 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	29,799,219 - 29,802,262	NCBI
Celera	6	31,294,546 - 31,298,502 (+)	NCBI		Celera
Cytogenetic Map	6	p22.1	NCBI
HuRef	6	29,494,781 - 29,498,733 (+)	NCBI		HuRef
CHM1_1	6	29,693,239 - 29,697,195 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	29,594,785 - 29,612,450 (+)	NCBI		T2T-CHM13v2.0

Gm7030
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	36,438,501 - 36,440,317 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	36,420,611 - 36,440,317 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	36,127,609 - 36,129,425 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	36,109,719 - 36,129,425 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	36,264,554 - 36,266,370 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	35,734,700 - 35,737,468 (-)	NCBI		MGSCv36	mm8
Cytogenetic Map	17	B1	NCBI
cM Map	17	18.94	NCBI

RT1-CE5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	3,407,880 - 3,484,130 (-)	NCBI		GRCr8
mRatBN7.2	20	3,403,418 - 3,479,476 (-)	NCBI	mRatBN7.2	mRatBN7.2
UTH_Rnor_SHR_Utx	20	3,635,423 - 3,639,599 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_WKY_Bbb_1.0	20	3,853,121 - 3,857,288 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	4,892,702 - 4,896,993 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	4,892,702 - 4,896,991 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	6,968,846 - 6,973,135 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	3,509,593 - 3,513,732	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Cytogenetic Map	20	p12	NCBI

DLA-79
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	41,142,312 - 41,170,018 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	41,142,307 - 41,170,100 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	40,176,809 - 40,179,971 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	41,795,844 - 41,823,728 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	41,796,018 - 41,799,523 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	41,261,712 - 41,264,874 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	40,836,984 - 40,840,146 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	41,564,328 - 41,567,490 (+)	NCBI		UU_Cfam_GSD_1.0

Variants

Variants in SLA-7
145 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_213768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005665788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013977626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021098282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ251914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK395227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY463541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU467793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01074462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GU322918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GU322919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GU322920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ224544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ224545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ224546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ224547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z97394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z97395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

NM_213768 ⟹ NP_998933

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	23,635,488 - 23,638,441 (-)	NCBI

Sequence:

show sequence

ATGGGGCCCCAAGCCCTCCTCCTGCTGCTCTCCGGGACCCTGGTATTGACCCAGCCCTGGGCGC
GTCCCCACTCCCTGAGGTATTTCTACACAGCCGTGTCCCGACCGAGTCGACGGGATCCCCGCTT
CTCCGTCGTCGGCTATGTAGACGACACGCAGTTCGTGCGGTTCGACAGCAATGCCCCGAATCCG
AGGGAGGAGCCGCGGACACCGTGGGTGGAGCTGGAGGGCCCGGAGTGTTGCGATCGGAACACAC
GCATCTACAAGGACACCTCACAGAATTTCCAAGTGAGCCTGAATGTCCTGCGCGGCTACTACAA
CCAGAGCGAGGCCGGGTCTCACACCTACCAGTGGCTTTGTGGATGCTATGTTGCGCGGGACGGG
CGCCTCCTCCGCGGGTACAGTCAGTTCGCCTATGACGGCGCGGATTACATCGTCCTGAACGAGG
ACCTGCGCTCCTGGACCGCGGTGGGCATGGCGGCTCAGATCACTCGGCGCAAATGGGAGGAGGA
AACTGTGGCAGAGCAGAGCAGAGCCTACCTGGAAGTGGCATGCGTGCAGTCGCTCCACAGATAC
CTGGCGAACGGGAAGGAGACGCTACAGCGGTCAGATCCTCCAAAGACACATGTGACCCGCCACC
CCAGCTCTGACAATAAAGTCACCTTGAGGTGCTGGGCCCTGGGCTTCTACCCTAAGGAGATCTC
CCTGACCTGGCAGCAGGAGGGGCAGGACCAGAGCCAGGACGTGGAGGTTGTGGAAACCAGGCCC
TCAGGGGATGGGACCTTCCGGAAGTGGGCGGCCCTGGTGGTGCCTCCTGGAGAGGAGCAGAGCT
ACACCTGCCATGTGCAGCACGAGGGCCTGCAGGAGCCCCTCACCCTGAGATGGGACCCTCCTCA
GCCCCCCGTCCCCATCGTGGGCATCATTGTTGGCCTGGTTCTCGTCCTGGTCACTGGAGCCGTG
GTGACTGGAGTTGTGATCTGGAGGAAGAAGTGCTCAGGTGGAAAAGTAAGGAAATACCAACAGG
CTGAAAGGAGCAGCCGTAGCGAGAACTCTGGTGTATGTTCGATGCCTTTCAAAGCTGAGACCCT
GGAGGCCCTGAGGTGGGACAGCGGTTGGGGTAGAGGGGACACAACAGGGTTATGGGGGTTCTTT
AAGTGGAACAATTTGAGCATGTGGGGGGCTGTCAGAAGGTCAGCACTTATGTGA

hide sequence

RefSeq Acc Id:

XM_005665788 ⟹ XP_005665845

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	23,634,731 - 23,638,616 (-)	NCBI

Sequence:

show sequence

GCGGCGGGAAGCTCAGGGTTGGGGATTCCACCGGCTCAGTTTCACTTTCTTTCTCAGGACTTGG
GTGGGGCCCTCCTACCGGAACACTCGCGACAGGACCCCGGTTCTCCCATTGGATTTCTGATTAC
AAAGTTTCCACCAATTCAGCTTCTCCCCTGACCCCGAGGGTGCGTTCATGGGGCCCCGAGCCCT
CCTCCTGCTGCTCTCCGGGACCCTGGTATTGACCCAGCCCTGGGCGCGTCCCCACTCCCTGAGG
TATTTCTACACAGCCGTGTCCCGACCGAGTCGACGGGATCCCCGCTTCTCCGTCGTCGGCTATG
TAGACGACACGCAGTTCGTGCGGTTCGACAGCAATGCCCCGAATCCGAGGGAGGAGCCGCGGAC
ACCGTGGGTGGAGCTGGAGGGCCCGGAGTATTGCGATCGGAACACACGCATCTACAAGGACACC
TCACAGAATTTCCAAGTGAGCCTGAATGTCCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGT
CTCACACCTACCAGTGGCTTTGTGGATGCTATGTTGCGCGGGACGGGCACCTCCTCCGCGGGTA
CAGTCAGTTCGCCTATGATGGCGCGGATTACATCGTCCTGAACGAGGACCTGCGCTCCTGGACC
GCGGTGGGCATGGCGGCTCAGATCACTCGGCGCAAATGGGAGGAGGAAACTGTGGCAGAGCAGA
GCAGAGCCTACCTGGAAGTGGCATGCGTGCAGTCGCTCCACAGATACCTGGCGAACGGGAAGGA
GACGCTACAGCGGTCAGATCCTCCAAAGACACATGTGACCCGCCACCCCAGCTCTGACAATAAA
GTCACCTTGAGGTGCTGGGCCCTGGGCTTCTACCCTAAGGAGATCTCACTGACCTGGCAGCAGG
AGGGGCAGGACCAGAGCCAGGACGTGGAGGTTGTGGAAACCAGGCCCTCAGGGGATGGGACCTT
CCAGAAGTGGGCGGCCCTGGTGGTGCCTCCTGGAGAGGAGCAGAGCTACACCTGCCATGTGCAG
CACGAGGGCCTGCAGGAGTCCCTCACCCTGAGATGGGACCCTCCTCAGCCCCCCGTCCCCATCG
TGGGCATCATTGTTGGCCTGGTTCTCGTCCTGGTCACTGGAGCCGTGGTGACTGGAGTTGTGAT
CTGGAGGAAGAAGTGCTCAGGTGGAAAAGTAAGGAAATACCAACAGGCTGAAAGGAGCAGCCGT
AGCGAGAACTCTGGTGTATGTTCGATGCCTTTCAAAGCTGAGACCCTGGAGGCCCTGAGTGGGA
AACAGCTGCCTTATACAAGACGGACTGATCAAGTAACAAACATCTCCCTCATGGCACTGTGACT
TGAAGATCCTCCGACTTTTCTTCTCAAAAGTAATTTCAGGAGTCCCAGTTGAGGATCAGTAGAT
TAAGAACCCAACACGGTTTCCGTGAGGATGCAAGTTTGATCCCTGGCCTCACTCAGTGGGAGCC
AACGTTGCCGTGAGCTGTGGTGTAGGCCAGCAGCTACAGCTCTGATTTGACTCCTAGCCTGGGA
ACTTCCATATGCCACAGGTGCAGCCCTAAAAAGAAAGAAAGAAAGAAAGAAACCGTCAGGAGTT
CCGGCTATGGCGCAACTGGATCAGCAGTGGCTCTGCAGCACCAAGACACAACTCCCATCCCCAG
CCTGGCATACTGGGTTAAGGATCTGGTGTTGACGCAGCCATGAAGGTCCCAACCATAGCTCCGA
TCTGATCGTTGTCCCAGGAATCCCACATGCCTCAGGGAGGCCAAAAGAAGGGAAAAAAAAGAGA
ATACCATCAATTTATAGATAATCAGTTGTCATATGACTATATAAGACTATATATATATATATAT
AGCTATGTATAGTTTTATTATCTGTAAATTACTGAATTGGGGGCTTAGCTTCGTAATGTTTTGA
AATAGTTTCTCCCTGACCCCCACATAACTTTATTTTTATACTAAAAATAAAATTCCAACCTTTC
AGAGAAAGTGA

hide sequence

RefSeq Acc Id:

XM_013977626 ⟹ XP_013833080

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	23,634,731 - 23,638,616 (-)	NCBI

Sequence:

show sequence

GCGGCGGGAAGCTCAGGGTTGGGGATTCCACCGGCTCAGTTTCACTTTCTTTCTCAGGACTTGG
GTGGGGCCCTCCTACCGGAACACTCGCGACAGGACCCCGGTTCTCCCATTGGATTTCTGATTAC
AAAGTTTCCACCAATTCAGCTTCTCCCCTGACCCCGAGGGTGCGTTCATGGGGCCCCGAGCCCT
CCTCCTGCTGCTCTCCGGGACCCTGGTATTGACCCAGCCCTGGGCGCCCGTGTCCCGACCGAGT
CGACGGGATCCCCGCTTCTCCGTCGTCGGCTATGTAGACGACACGCAGTTCGTGCGGTTCGACA
GCAATGCCCCGAATCCGAGGGAGGAGCCGCGGACACCGTGGGTGGAGCTGGAGGGCCCGGAGTA
TTGCGATCGGAACACACGCATCTACAAGGACACCTCACAGAATTTCCAAGTGAGCCTGAATGTC
CTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCTACCAGTGGCTTTGTGGATGCT
ATGTTGCGCGGGACGGGCACCTCCTCCGCGGGTACAGTCAGTTCGCCTATGATGGCGCGGATTA
CATCGTCCTGAACGAGGACCTGCGCTCCTGGACCGCGGTGGGCATGGCGGCTCAGATCACTCGG
CGCAAATGGGAGGAGGAAACTGTGGCAGAGCAGAGCAGAGCCTACCTGGAAGTGGCATGCGTGC
AGTCGCTCCACAGATACCTGGCGAACGGGAAGGAGACGCTACAGCGGTCAGATCCTCCAAAGAC
ACATGTGACCCGCCACCCCAGCTCTGACAATAAAGTCACCTTGAGGTGCTGGGCCCTGGGCTTC
TACCCTAAGGAGATCTCACTGACCTGGCAGCAGGAGGGGCAGGACCAGAGCCAGGACGTGGAGG
TTGTGGAAACCAGGCCCTCAGGGGATGGGACCTTCCAGAAGTGGGCGGCCCTGGTGGTGCCTCC
TGGAGAGGAGCAGAGCTACACCTGCCATGTGCAGCACGAGGGCCTGCAGGAGTCCCTCACCCTG
AGATGGGACCCTCCTCAGCCCCCCGTCCCCATCGTGGGCATCATTGTTGGCCTGGTTCTCGTCC
TGGTCACTGGAGCCGTGGTGACTGGAGTTGTGATCTGGAGGAAGAAGTGCTCAGGTGGAAAAGT
AAGGAAATACCAACAGGCTGAAAGGAGCAGCCGTAGCGAGAACTCTGGTGTATGTTCGATGCCT
TTCAAAGCTGAGACCCTGGAGGCCCTGAGTGGGAAACAGCTGCCTTATACAAGACGGACTGATC
AAGTAACAAACATCTCCCTCATGGCACTGTGACTTGAAGATCCTCCGACTTTTCTTCTCAAAAG
TAATTTCAGGAGTCCCAGTTGAGGATCAGTAGATTAAGAACCCAACACGGTTTCCGTGAGGATG
CAAGTTTGATCCCTGGCCTCACTCAGTGGGAGCCAACGTTGCCGTGAGCTGTGGTGTAGGCCAG
CAGCTACAGCTCTGATTTGACTCCTAGCCTGGGAACTTCCATATGCCACAGGTGCAGCCCTAAA
AAGAAAGAAAGAAAGAAAGAAACCGTCAGGAGTTCCGGCTATGGCGCAACTGGATCAGCAGTGG
CTCTGCAGCACCAAGACACAACTCCCATCCCCAGCCTGGCATACTGGGTTAAGGATCTGGTGTT
GACGCAGCCATGAAGGTCCCAACCATAGCTCCGATCTGATCGTTGTCCCAGGAATCCCACATGC
CTCAGGGAGGCCAAAAGAAGGGAAAAAAAAGAGAATACCATCAATTTATAGATAATCAGTTGTC
ATATGACTATATAAGACTATATATATATATATATAGCTATGTATAGTTTTATTATCTGTAAATT
ACTGAATTGGGGGCTTAGCTTCGTAATGTTTTGAAATAGTTTCTCCCTGACCCCCACATAACTT
TATTTTTATACTAAAAATAAAATTCCAACCTTTCAGAGAAAGTGA

hide sequence

RefSeq Acc Id:

XM_021098282 ⟹ XP_020953941

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	23,634,731 - 23,638,722 (-)	NCBI

Sequence:

show sequence

CCCCTGGGCCTGGACTCCGGAAGACAAGGACTTGGGTGGGGCCCTCCTACCGGAACACTCGCGA
CAGGACCCCGGTTCTCCCATTGGATTTCTGATTACAAAGTTTCCACCAATTCAGCTTCTCCCCT
GACCCCGAGGGTGCGTTCATGGGGCCCCGAGCCCTCCTCCTGCTGCTCTCCGGGACCCTGGTAT
TGACCCAGCCCTGGGCGCGTGAGTGCGGGATGGGGAGATAAATGGCTTTGGGGGGTGGAAGGGG
AGCGCGAGAAGAGCGTGGTTGGGGGACAGGACCCTCAGGGAAGGCGCGTCTCCATAACCCCGGT
CCAGATCCCGCTACTCAGCCCCTCGGACCCGCCCCGTCCTTATCCTCCCCTGTCCCTGCCTGGT
CTCCGCACCCTCTTCTCACTCACTCGGGTCTCACGCTGTCCTTTTCCGTCTCACGCTCTCTTCG
TGCCCTCCCCGCTCCTGGTCCCATCACGTCGGACCCGGGGTCCAGCGCCTCAACCCCCCGCCCC
TTGCCCCCAGGTCCCCACTCCCTGAGGTATTTCTACACAGCCGTGTCCCGACCGAGTCGACGGG
ATCCCCGCTTCTCCGTCGTCGGCTATGTAGACGACACGCAGTTCGTGCGGTTCGACAGCAATGC
CCCGAATCCGAGGGAGGAGCCGCGGACACCGTGGGTGGAGCTGGAGGGCCCGGAGTATTGCGAT
CGGAACACACGCATCTACAAGGACACCTCACAGAATTTCCAAGTGAGCCTGAATGTCCTGCGCG
GCTACTACAACCAGAGCGAGGCCGGGTCTCACACCTACCAGTGGCTTTGTGGATGCTATGTTGC
GCGGGACGGGCACCTCCTCCGCGGGTACAGTCAGTTCGCCTATGATGGCGCGGATTACATCGTC
CTGAACGAGGACCTGCGCTCCTGGACCGCGGTGGGCATGGCGGCTCAGATCACTCGGCGCAAAT
GGGAGGAGGAAACTGTGGCAGAGCAGAGCAGAGCCTACCTGGAAGTGGCATGCGTGCAGTCGCT
CCACAGATACCTGGCGAACGGGAAGGAGACGCTACAGCGGTCAGATCCTCCAAAGACACATGTG
ACCCGCCACCCCAGCTCTGACAATAAAGTCACCTTGAGGTGCTGGGCCCTGGGCTTCTACCCTA
AGGAGATCTCACTGACCTGGCAGCAGGAGGGGCAGGACCAGAGCCAGGACGTGGAGGTTGTGGA
AACCAGGCCCTCAGGGGATGGGACCTTCCAGAAGTGGGCGGCCCTGGTGGTGCCTCCTGGAGAG
GAGCAGAGCTACACCTGCCATGTGCAGCACGAGGGCCTGCAGGAGTCCCTCACCCTGAGATGGG
ACCCTCCTCAGCCCCCCGTCCCCATCGTGGGCATCATTGTTGGCCTGGTTCTCGTCCTGGTCAC
TGGAGCCGTGGTGACTGGAGTTGTGATCTGGAGGAAGAAGTGCTCAGGTGGAAAAGTAAGGAAA
TACCAACAGGCTGAAAGGAGCAGCCGTAGCGAGAACTCTGGTGTATGTTCGATGCCTTTCAAAG
CTGAGACCCTGGAGGCCCTGAGTGGGAAACAGCTGCCTTATACAAGACGGACTGATCAAGTAAC
AAACATCTCCCTCATGGCACTGTGACTTGAAGATCCTCCGACTTTTCTTCTCAAAAGTAATTTC
AGGAGTCCCAGTTGAGGATCAGTAGATTAAGAACCCAACACGGTTTCCGTGAGGATGCAAGTTT
GATCCCTGGCCTCACTCAGTGGGAGCCAACGTTGCCGTGAGCTGTGGTGTAGGCCAGCAGCTAC
AGCTCTGATTTGACTCCTAGCCTGGGAACTTCCATATGCCACAGGTGCAGCCCTAAAAAGAAAG
AAAGAAAGAAAGAAACCGTCAGGAGTTCCGGCTATGGCGCAACTGGATCAGCAGTGGCTCTGCA
GCACCAAGACACAACTCCCATCCCCAGCCTGGCATACTGGGTTAAGGATCTGGTGTTGACGCAG
CCATGAAGGTCCCAACCATAGCTCCGATCTGATCGTTGTCCCAGGAATCCCACATGCCTCAGGG
AGGCCAAAAGAAGGGAAAAAAAAGAGAATACCATCAATTTATAGATAATCAGTTGTCATATGAC
TATATAAGACTATATATATATATATATAGCTATGTATAGTTTTATTATCTGTAAATTACTGAAT
TGGGGGCTTAGCTTCGTAATGTTTTGAAATAGTTTCTCCCTGACCCCCACATAACTTTATTTTT
ATACTAAAAATAAAATTCCAACCTTTCAGAGAAAGTGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_998933	(Get FASTA)	NCBI Sequence Viewer
	XP_005665845	(Get FASTA)	NCBI Sequence Viewer
	XP_013833080	(Get FASTA)	NCBI Sequence Viewer
	XP_020953941	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAR82957	(Get FASTA)	NCBI Sequence Viewer
	ADD71918	(Get FASTA)	NCBI Sequence Viewer
	ADD71919	(Get FASTA)	NCBI Sequence Viewer
	ADD71920	(Get FASTA)	NCBI Sequence Viewer
	AEH16625	(Get FASTA)	NCBI Sequence Viewer
	AEH16626	(Get FASTA)	NCBI Sequence Viewer
	AEH16627	(Get FASTA)	NCBI Sequence Viewer
	AEH16628	(Get FASTA)	NCBI Sequence Viewer
	CAB10684	(Get FASTA)	NCBI Sequence Viewer
	CAB10685	(Get FASTA)	NCBI Sequence Viewer
	CAB63858	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000001305
	ENSSSCP00000001305.5
	ENSSSCP00000056991.2
	ENSSSCP00000065664.2
	ENSSSCP00005030471.1
	ENSSSCP00005030603.1
	ENSSSCP00005030623.1
	ENSSSCP00005030645.1
	ENSSSCP00005030726.1
	ENSSSCP00005031253.1
	ENSSSCP00005031301.1
	ENSSSCP00005031346.1
	ENSSSCP00005031375.1
	ENSSSCP00025048983.1
	ENSSSCP00025048984.1
	ENSSSCP00040044987.1
	ENSSSCP00040045106.1
	ENSSSCP00045047464.1
	ENSSSCP00045047512.1
	ENSSSCP00050003266.1
	ENSSSCP00055047138.1
	ENSSSCP00055047179.1
	ENSSSCP00060024413.1

RefSeq Acc Id:	XP_020953941 ⟸ XM_021098282
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D2BK25 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALGGGRGAREERGWGTGPSGKARLHNPGPDPATQPLGPAPSLSSPVPAWSPHPLLTHSGLTLS FSVSRSLRALPAPGPITSDPGSSASTPRPLPPGPHSLRYFYTAVSRPSRRDPRFSVVGYVDDTQ FVRFDSNAPNPREEPRTPWVELEGPEYCDRNTRIYKDTSQNFQVSLNVLRGYYNQSEAGSHTYQ WLCGCYVARDGHLLRGYSQFAYDGADYIVLNEDLRSWTAVGMAAQITRRKWEEETVAEQSRAYL EVACVQSLHRYLANGKETLQRSDPPKTHVTRHPSSDNKVTLRCWALGFYPKEISLTWQQEGQDQ SQDVEVVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQESLTLRWDPPQPPVPIVGIIV GLVLVLVTGAVVTGVVIWRKKCSGGKVRKYQQAERSSRSENSGVCSMPFKAETLEALSGKQLPY TRRTDQVTNISLMAL hide sequence

RefSeq Acc Id:	XP_013833080 ⟸ XM_013977626
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D1JHW8 (UniProtKB/TrEMBL), A0A8D0TTC6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGPRALLLLLSGTLVLTQPWAPVSRPSRRDPRFSVVGYVDDTQFVRFDSNAPNPREEPRTPWVE LEGPEYCDRNTRIYKDTSQNFQVSLNVLRGYYNQSEAGSHTYQWLCGCYVARDGHLLRGYSQFA YDGADYIVLNEDLRSWTAVGMAAQITRRKWEEETVAEQSRAYLEVACVQSLHRYLANGKETLQR SDPPKTHVTRHPSSDNKVTLRCWALGFYPKEISLTWQQEGQDQSQDVEVVETRPSGDGTFQKWA ALVVPPGEEQSYTCHVQHEGLQESLTLRWDPPQPPVPIVGIIVGLVLVLVTGAVVTGVVIWRKK CSGGKVRKYQQAERSSRSENSGVCSMPFKAETLEALSGKQLPYTRRTDQVTNISLMAL hide sequence

RefSeq Acc Id:	XP_005665845 ⟸ XM_005665788
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1JHZ9 (UniProtKB/TrEMBL), F1RZ57 (UniProtKB/TrEMBL), A0A8D1S9M0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGPRALLLLLSGTLVLTQPWARPHSLRYFYTAVSRPSRRDPRFSVVGYVDDTQFVRFDSNAPNP REEPRTPWVELEGPEYCDRNTRIYKDTSQNFQVSLNVLRGYYNQSEAGSHTYQWLCGCYVARDG HLLRGYSQFAYDGADYIVLNEDLRSWTAVGMAAQITRRKWEEETVAEQSRAYLEVACVQSLHRY LANGKETLQRSDPPKTHVTRHPSSDNKVTLRCWALGFYPKEISLTWQQEGQDQSQDVEVVETRP SGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQESLTLRWDPPQPPVPIVGIIVGLVLVLVTGAV VTGVVIWRKKCSGGKVRKYQQAERSSRSENSGVCSMPFKAETLEALSGKQLPYTRRTDQVTNIS LMAL hide sequence

RefSeq Acc Id:	NP_998933 ⟸ NM_213768
- Peptide Label:	precursor
- UniProtKB:	Q6S7D2 (UniProtKB/TrEMBL), A0A8D1JLV4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGPQALLLLLSGTLVLTQPWARPHSLRYFYTAVSRPSRRDPRFSVVGYVDDTQFVRFDSNAPNP REEPRTPWVELEGPECCDRNTRIYKDTSQNFQVSLNVLRGYYNQSEAGSHTYQWLCGCYVARDG RLLRGYSQFAYDGADYIVLNEDLRSWTAVGMAAQITRRKWEEETVAEQSRAYLEVACVQSLHRY LANGKETLQRSDPPKTHVTRHPSSDNKVTLRCWALGFYPKEISLTWQQEGQDQSQDVEVVETRP SGDGTFRKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQPPVPIVGIIVGLVLVLVTGAV VTGVVIWRKKCSGGKVRKYQQAERSSRSENSGVCSMPFKAETLEALRWDSGWGRGDTTGLWGFF KWNNLSMWGAVRRSALM hide sequence

Protein Domains

Ig-like MHC class I-like antigen recognition-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000001398	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005030856	UniProtKB/TrEMBL
	ENSSSCG00025077759	UniProtKB/TrEMBL
	ENSSSCG00040071936	UniProtKB/TrEMBL
	ENSSSCG00045038292	UniProtKB/TrEMBL
	ENSSSCG00050005665	UniProtKB/TrEMBL
	ENSSSCG00055029263	UniProtKB/TrEMBL
	ENSSSCG00060041896	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000001336	ENTREZGENE
	ENSSSCT00000001336.5	UniProtKB/TrEMBL
	ENSSSCT00000044197.3	UniProtKB/TrEMBL
	ENSSSCT00000084356.2	UniProtKB/TrEMBL
	ENSSSCT00005049358.1	UniProtKB/TrEMBL
	ENSSSCT00005049561.1	UniProtKB/TrEMBL
	ENSSSCT00005049585.1	UniProtKB/TrEMBL
	ENSSSCT00005049621.1	UniProtKB/TrEMBL
	ENSSSCT00005049762.1	UniProtKB/TrEMBL
	ENSSSCT00005050562.1	UniProtKB/TrEMBL
	ENSSSCT00005050632.1	UniProtKB/TrEMBL
	ENSSSCT00005050708.1	UniProtKB/TrEMBL
	ENSSSCT00005050760.1	UniProtKB/TrEMBL
	ENSSSCT00025108230.1	UniProtKB/TrEMBL
	ENSSSCT00025108231.1	UniProtKB/TrEMBL
	ENSSSCT00040100173.1	UniProtKB/TrEMBL
	ENSSSCT00040100391.1	UniProtKB/TrEMBL
	ENSSSCT00045066863.1	UniProtKB/TrEMBL
	ENSSSCT00045066926.1	UniProtKB/TrEMBL
	ENSSSCT00050007751.1	UniProtKB/TrEMBL
	ENSSSCT00055058864.1	UniProtKB/TrEMBL
	ENSSSCT00055058911.1	UniProtKB/TrEMBL
	ENSSSCT00060057049.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
	3.30.500.10	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig/MHC_CS	UniProtKB/TrEMBL
	Ig_C1-set	UniProtKB/TrEMBL
	MHC_class-I_related	UniProtKB/TrEMBL
	MHC_I-like_Ag-recog	UniProtKB/TrEMBL
	MHC_I-like_Ag-recog_sf	UniProtKB/TrEMBL
	MHC_I/II-like_Ag-recog	UniProtKB/TrEMBL
	MHC_I_a_a1/a2	UniProtKB/TrEMBL
KEGG Report	ssc:396650	UniProtKB/TrEMBL
NCBI Gene	SLA-7	ENTREZGENE
PANTHER	CLASS IB MHC ANTIGEN QA-2-RELATED	UniProtKB/TrEMBL
	MHC CLASS I-RELATED	UniProtKB/TrEMBL
Pfam	C1-set	UniProtKB/TrEMBL
	MHC_I	UniProtKB/TrEMBL
PRINTS	MHCCLASSI	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
	IG_MHC	UniProtKB/TrEMBL
SMART	IGc1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
	SSF54452	UniProtKB/TrEMBL
UniProt	A0A287BKQ8_PIG	UniProtKB/TrEMBL
	A0A2S1PUJ1_PIG	UniProtKB/TrEMBL
	A0A5G2R517_PIG	UniProtKB/TrEMBL
	A0A8D0JMW7_PIG	UniProtKB/TrEMBL
	A0A8D0JSJ1_PIG	UniProtKB/TrEMBL
	A0A8D0JVE5_PIG	UniProtKB/TrEMBL
	A0A8D0JX70_PIG	UniProtKB/TrEMBL
	A0A8D0JXJ9_PIG	UniProtKB/TrEMBL
	A0A8D0JYN7_PIG	UniProtKB/TrEMBL
	A0A8D0LRU4_PIG	UniProtKB/TrEMBL
	A0A8D0LS39_PIG	UniProtKB/TrEMBL
	A0A8D0LSR5_PIG	UniProtKB/TrEMBL
	A0A8D0TTC6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1JHW8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1JHZ9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1JLV4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1S9M0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D2BK25	ENTREZGENE, UniProtKB/TrEMBL
	D4NVV4_PIG	UniProtKB/TrEMBL
	D4NVV5_PIG	UniProtKB/TrEMBL
	D4NVV6_PIG	UniProtKB/TrEMBL
	F1RZ57	ENTREZGENE, UniProtKB/TrEMBL
	F8RU68_PIG	UniProtKB/TrEMBL
	F8RU69_PIG	UniProtKB/TrEMBL
	O19079_PIG	UniProtKB/TrEMBL
	O19080_PIG	UniProtKB/TrEMBL
	Q6S7D2	ENTREZGENE, UniProtKB/TrEMBL
	Q9TNZ2_PIG	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD