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Gene: RELB (RELB proto-oncogene, NF-kB subunit) Sus scrofa

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Symbol:

RELB

Name:

RELB proto-oncogene, NF-kB subunit (Ensembl:RELB proto-onco, NF-kB subunit)

RGD ID:

13989350

Description:

ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to osmotic stress (ortholog); myeloid dendritic cell differentiation (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); breast cancer (ortholog); FOUND IN nucleus (ortholog); synapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transcription factor RelB; v-rel reticuloendotheliosis viral oncogene homolog B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	51,444,664 - 51,480,319 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	51,444,670 - 51,480,350 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Mammary Neoplasms (ISO)

atopic dermatitis (ISO)

breast cancer (ISO)

Cerebral Hemorrhage (ISO)

Experimental Mammary Neoplasms (ISO)

Heat Stroke (ISO)

immunodeficiency 53 (ISO)

kidney disease (ISO)

muscular atrophy (ISO)

prediabetes syndrome (ISO)

transitional cell carcinoma (ISO)

Transplant Rejection (ISO)

ureteral obstruction (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antigen processing and presentation (IEA,ISO)

canonical NF-kappaB signal transduction (IBA)

cellular response to osmotic stress (ISO)

circadian regulation of gene expression (IEA)

inflammatory response (IBA)

innate immune response (IBA)

lymphocyte differentiation (IEA)

myeloid dendritic cell differentiation (IEA,ISO)

negative regulation of DNA-templated transcription (IEA)

negative regulation of interferon-beta production (IEA)

non-canonical NF-kappaB signal transduction (IBA,IEA)

positive regulation of transcription by RNA polymerase II (IBA)

regulation of DNA-templated transcription (IEA)

regulation of gene expression (IEA)

response to cytokine (IBA)

T-helper 1 cell differentiation (IEA,ISO)

T-helper 1 type immune response (IEA,ISO)

Cellular Component

centrosome (IEA)

chromatin (IEA)

cytoplasm (IBA,IEA)

cytosol (IEA)

nucleoplasm (IEA)

nucleus (IBA,IEA,ISO)

protein-containing complex (IEA)

synapse (IEA,ISO)

transcription repressor complex (IEA)

Molecular Function

DNA binding (IEA,ISO)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

identical protein binding (IEA)

protein binding (ISO)

protein kinase binding (IEA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

interleukin-12 signaling pathway (ISO)

nuclear factor kappa B signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RELB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	51,444,664 - 51,480,319 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	51,444,670 - 51,480,350 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

RELB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	45,001,464 - 45,038,192 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	45,001,461 - 45,038,192 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	45,504,722 - 45,541,450 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	50,196,552 - 50,233,292 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	50,196,551 - 50,233,292	NCBI
Celera	19	42,309,022 - 42,345,751 (+)	NCBI		Celera
Cytogenetic Map	19	q13.32	NCBI
HuRef	19	41,935,689 - 41,971,666 (+)	NCBI		HuRef
CHM1_1	19	45,507,785 - 45,544,777 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	47,826,284 - 47,863,291 (+)	NCBI		T2T-CHM13v2.0

Relb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	19,340,142 - 19,363,352 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	19,340,142 - 19,363,363 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	19,606,217 - 19,629,438 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	19,606,217 - 19,629,438 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	20,191,571 - 20,214,787 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	18,764,744 - 18,787,960 (-)	NCBI		MGSCv36	mm8
Celera	7	17,011,812 - 17,035,368 (-)	NCBI		Celera
Cytogenetic Map	7	A3	NCBI
cM Map	7	9.93	NCBI

Relb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	88,385,717 - 88,413,380 (-)	NCBI		GRCr8
mRatBN7.2	1	79,257,738 - 79,285,490 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	79,257,725 - 79,285,507 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	1	80,517,081 - 80,545,019 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	80,517,411 - 80,544,825 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	81,783,102 - 81,810,793 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	1	73,717,263 - 73,744,749 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Relb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955555	2,060,533 - 2,086,229 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955555	2,060,533 - 2,086,229 (+)	NCBI	ChiLan1.0	ChiLan1.0

RELB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	51,160,728 - 51,199,294 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	53,032,147 - 53,070,712 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	41,948,559 - 41,987,121 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	50,563,164 - 50,590,627 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	50,554,864 - 50,590,223 (+)	Ensembl	panpan1.1		panPan2

RELB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	110,436,677 - 110,466,709 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	110,436,662 - 110,466,809 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	109,917,954 - 109,947,957 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	110,966,408 - 110,996,642 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	110,966,393 - 110,996,550 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	110,641,652 - 110,671,422 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	110,277,051 - 110,306,823 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	111,145,641 - 111,175,691 (-)	NCBI		UU_Cfam_GSD_1.0

Relb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	17,222,260 - 17,249,483 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936706	1,569,756 - 1,596,456 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936706	1,569,603 - 1,596,831 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RELB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	38,463,414 - 38,500,487 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666073	18,045,037 - 18,087,099 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Relb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624907	1,806,874 - 1,829,417 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624907	1,806,784 - 1,829,686 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RELB
424 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	22	3	2	5	14	12	22	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021094520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01042179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000049320 ⟹ ENSSSCP00000034265

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	51,444,664 - 51,480,319 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000086708 ⟹ ENSSSCP00000071652

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	51,444,636 - 51,480,320 (+)	Ensembl

RefSeq Acc Id:

XM_021094520 ⟹ XP_020950179

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	51,444,722 - 51,480,350 (+)	NCBI

Sequence:

show sequence

CTGCGGCCCCAGCCCCTGCGCCGCTCTCCCGACCCGAAATCGTCCGCCGGACTGTGCCACCTGG
CCGTCCGGCCTGCCCGCGTGTGTGTTTTGGTCTGGACTGGCGTCTGGGCCGTCAGTCCCCACTG
GTCGGGCCATGCCGAGTCGCCGCGTCGCCAGATCGTCCGCTGCGCCGGAGCTGGGGGCCTTGGG
GTCCACTGACCTCTCCTCGCTCTCGCTAGCCGTTTCCCGGACCACGGAGATCATTGACGAGTAC
ATCAAGGAGAATGGCTTTGGCCTGGAGGGGGCGCCGCCGGGCGCCGGCGAGGGGCTGCCGCGCC
TGGTGTCCCGCGGGGCGGCCTCCCTGAGCACCGTCACCCTCGGCCCCGCGGCGCCCCCGGCCAC
GCCGCCCGCCTGGGGCTGCCCCCTGGGCCGGCTGGTGCCCCCAGGCCCCGGGCCGCGGCCGCAC
CTGGTCATCACTGAGCAGCCCAAGCAGCGCGGGATGCGCTTCCGCTACGAGTGCGAGGGCCGCT
CCGCCGGCAGCATCCTGGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCT
CCGGGACTGTGGAGGGCTGCGGGAGGTGGAGGTGACTGCGTGCCTGGTGTGGAAGGACTGGCCT
CACCGAGTTCACCCCCACAGCCTGGTGGGCAAGGACTGCACGGACGGCGTCTGCAGGGTGCGGC
TGCGGCCTCATGTCAGCCCCCGGCACAGCCACCAGTGCCCCTTCCTGGAGGCAACTGAAGATAT
GCTCTTTAACAACCTGGGCATCCAGTGCGTGAGGAAGAAGGAGATCGAGGCCGCCATCGAGCGG
AAGATTCAGCTGGGCATCGACCCCTACAACGCTGGGTCCTTGAAGAACCATCAGGAGGTGGACA
TGAATGTCGTGAGGATCTGCTTCCAGGCCTCGTACAGGGACCCACAAGGACAGATGCGCCGGAT
GGACCCTGTGCTCTCTGAGCCCGTCTACGACAAGAAGTCCACAAACACATCAGAGCTGCGGATC
TGCCGAATCAACAAGGAGAGCGGGCCATGCACGGGTGGTGAGGAGCTCTACCTGCTGTGTGACA
AGGTGCAGAAAGAGGACATCTCAGTGGTGTTCAGCAGAGCCTCCTGGGAAGGCCGGGCGGACTT
CTCCCAGGCCGACGTGCACCGCCAGATCGCCATCGTGTTCAAGACACCGCCCTACGAGGACCTG
GAGATCGTTGAACCGGTGACAGTGAACGTGTTCCTGCAGCGGCTCACGGACGGGGTCTGCAGTG
AGCCTCTGCCCTTCACGTACCTGCCTCGGGACCACGACAGCTACGGAGTGGACAAGAAGCGGAA
ACGGGGGATGCCTGACGTGCTTGGGGAGCTCAATAGCTCTGACCCCCATGGCATCGAGAGCAAA
CGACGGAGGAAAAAGCCGGCCTTCCTGGATCACTTCCTGCCCAGCCATGGCTCAGGCCCGTTCC
TCCCACCGTCAGCGCTGCTGCCAGACACAGACTTCTTCCCAGGCACTGTATCCCTCCCTGGCCT
GGAGCCCCCCGGCGGGCCGGATCTCCTGGACGATGGTTTTGCCTATGACCCTGCTGCCCCCACA
CTCTTCACCATGCTGGACATGCTGCCCCCAGCGCCACCACTCTCCAGCGCTGTCGCGGGCAACG
GGGGGGCAGGGGCCCCGGTCGCGGAGCCCCCGGGCCCTGAGCCGCTGACGCTGGACTCGTACCA
GGCCCCGGGCTCCGGGGATGGAGGCACTGCCAGCCTCGTGGGCAGCAACATGTTCCCCAACCAG
TACCGCGAGGGGGGCTTTGGAAGCGGCCTCCTGTCCCCCGGGCCTGAGGCCACGTAGCCCCTGC
GGCACTGGAGGAGAGGCACTGGGTGGGGAGGGTGGTGGAAGGGGCCGTGCAAACCCAACCGGGA
TGTCCAGCACCCCCATCCCCTTGGGCTGCCCTTGGTCCGTCTTCCGACGTCCTCATCCTTCCTA
ATCGGACATCTTCAGTGCTGGAGAGAAACGCCGTAGCATCGGTTTCCCTTGAGCCCATTTTACA
AATGAGAAAACTGAGTCTGGAGAGGAAAAGGGGTTTGGCTTCCAAATACTAGCTCTTTAAAGTT
GCCTCAGCTGGGGTGCCTTCTCCCGGCGGATTCTAAAGTGTAAATAGGGGAGGGGGGCGCAGAT
CCCTAGCCCTCCCTCCCCACGCCTGAAGGTGGGGGGGGTAATTGTTCACAGTCTTCCCAATAAA
GACGAATTTTTGAGCCCGGGGGGGGTCTCATCTCTTCTGCA

hide sequence

RefSeq Acc Id:

XM_021094521 ⟹ XP_020950180

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	51,444,670 - 51,480,350 (+)	NCBI

Sequence:

show sequence

CGGCCCGGCCCGGCGCCCCCCGCAGCCCCGGGCGCCGCGCGTCCAGCCCGGCCTGCGGCCCCAG
CCCCTGCGCCGCTCTCCCGACCCGAAATCGTCCGCCGGACTGTGCCACCTGGCCGTCCGGCCTG
CCCGCGTGTGTGTTTTGGTCTGGACTGGCGTCTGGGCCGTCAGTCCCCACTGGTCGGGCCATGC
CGAGTCGCCGCGTCGCCAGATCGTCCGCTGCGCCGGAGCTGGGGGCCTTGGGGTCCACTGACCT
CTCCTCGCTCTCGCTAGCCGTTTCCCGGACCACGGATGAATTGGAGATCATTGACGAGTACATC
AAGGAGAATGGCTTTGGCCTGGAGGGGGCGCCGCCGGGCGCCGGCGAGGGGCTGCCGCGCCTGG
TGTCCCGCGGGGCGGCCTCCCTGAGCACCGTCACCCTCGGCCCCGCGGCGCCCCCGGCCACGCC
GCCCGCCTGGGGCTGCCCCCTGGGCCGGCTGGTGCCCCCAGGCCCCGGGCCGCGGCCGCACCTG
GTCATCACTGAGCAGCCCAAGCAGCGCGGGATGCGCTTCCGCTACGAGTGCGAGGGCCGCTCCG
CCGGCAGCATCCTGGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCTCCG
GGACTGTGGAGGGCTGCGGGAGGTGGAGGTGACTGCGTGCCTGGTGTGGAAGGACTGGCCTCAC
CGAGTTCACCCCCACAGCCTGGTGGGCAAGGACTGCACGGACGGCGTCTGCAGGGTGCGGCTGC
GGCCTCATGTCAGCCCCCGGCACAGCTTTAACAACCTGGGCATCCAGTGCGTGAGGAAGAAGGA
GATCGAGGCCGCCATCGAGCGGAAGATTCAGCTGGGCATCGACCCCTACAACGCTGGGTCCTTG
AAGAACCATCAGGAGGTGGACATGAATGTCGTGAGGATCTGCTTCCAGGCCTCGTACAGGGACC
CACAAGGACAGATGCGCCGGATGGACCCTGTGCTCTCTGAGCCCGTCTACGACAAGAAGTCCAC
AAACACATCAGAGCTGCGGATCTGCCGAATCAACAAGGAGAGCGGGCCATGCACGGGTGGTGAG
GAGCTCTACCTGCTGTGTGACAAGGTGCAGAAAGAGGACATCTCAGTGGTGTTCAGCAGAGCCT
CCTGGGAAGGCCGGGCGGACTTCTCCCAGGCCGACGTGCACCGCCAGATCGCCATCGTGTTCAA
GACACCGCCCTACGAGGACCTGGAGATCGTTGAACCGGTGACAGTGAACGTGTTCCTGCAGCGG
CTCACGGACGGGGTCTGCAGTGAGCCTCTGCCCTTCACGTACCTGCCTCGGGACCACGACAGCT
ACGGAGTGGACAAGAAGCGGAAACGGGGGATGCCTGACGTGCTTGGGGAGCTCAATAGCTCTGA
CCCCCATGGCATCGAGAGCAAACGACGGAGGAAAAAGCCGGCCTTCCTGGATCACTTCCTGCCC
AGCCATGGCTCAGGCCCGTTCCTCCCACCGTCAGCGCTGCTGCCAGACACAGACTTCTTCCCAG
GCACTGTATCCCTCCCTGGCCTGGAGCCCCCCGGCGGGCCGGATCTCCTGGACGATGGTTTTGC
CTATGACCCTGCTGCCCCCACACTCTTCACCATGCTGGACATGCTGCCCCCAGCGCCACCACTC
TCCAGCGCTGTCGCGGGCAACGGGGGGGCAGGGGCCCCGGTCGCGGAGCCCCCGGGCCCTGAGC
CGCTGACGCTGGACTCGTACCAGGCCCCGGGCTCCGGGGATGGAGGCACTGCCAGCCTCGTGGG
CAGCAACATGTTCCCCAACCAGTACCGCGAGGGGGGCTTTGGAAGCGGCCTCCTGTCCCCCGGG
CCTGAGGCCACGTAGCCCCTGCGGCACTGGAGGAGAGGCACTGGGTGGGGAGGGTGGTGGAAGG
GGCCGTGCAAACCCAACCGGGATGTCCAGCACCCCCATCCCCTTGGGCTGCCCTTGGTCCGTCT
TCCGACGTCCTCATCCTTCCTAATCGGACATCTTCAGTGCTGGAGAGAAACGCCGTAGCATCGG
TTTCCCTTGAGCCCATTTTACAAATGAGAAAACTGAGTCTGGAGAGGAAAAGGGGTTTGGCTTC
CAAATACTAGCTCTTTAAAGTTGCCTCAGCTGGGGTGCCTTCTCCCGGCGGATTCTAAAGTGTA
AATAGGGGAGGGGGGCGCAGATCCCTAGCCCTCCCTCCCCACGCCTGAAGGTGGGGGGGGTAAT
TGTTCACAGTCTTCCCAATAAAGACGAATTTTTGAGCCCGGGGGGGGTCTCATCTCTTCTGCA

hide sequence

RefSeq Acc Id:

XM_021094522 ⟹ XP_020950181

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	51,444,672 - 51,480,350 (+)	NCBI

Sequence:

show sequence

GCCCGGCCCGGCGCCCCCCGCAGCCCCGGGCGCCGCGCGTCCAGCCCGGCCTGCGGCCCCAGCC
CCTGCGCCGCTCTCCCGACCCGAAATCGTCCGCCGGACTGTGCCACCTGGCCGTCCGGCCTGCC
CGCGTGTGTGTTTTGGTCTGGACTGGCGTCTGGGCCGTCAGTCCCCACTGGTCGGGCCATGCCG
AGTCGCCGCGTCGCCAGATCGTCCGCTGCGCCGGAGCTGGGGGCCTTGGGGTCCACTGACCTCT
CCTCGCTCTCGCTAGCCGTTTCCCGGACCACGGATGAATTGGAGATCATTGACGAGTACATCAA
GGAGAATGGCTTTGGCCTGGAGGGGGCGCCGCCGGGCGCCGGCGAGGGGCTGCCGCGCCTGGTG
TCCCGCGGGGCGGCCTCCCTGAGCACCGTCACCCTCGGCCCCGCGGCGCCCCCGGCCACGCCGC
CCGCCTGGGGCTGCCCCCTGGGCCGGCTGGTGCCCCCAGGCCCCGGGCCGCGGCCGCACCTGGT
CATCACTGAGCAGCCCAAGCAGCGCGGGATGCGCTTCCGCTACGAGTGCGAGGGCCGCTCCGCC
GGCAGCATCCTGGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCTCCGGG
ACTGTGGAGGGCTGCGGGAGGTGGAGGTGACTGCGTGCCTGGTGTGGAAGGACTGGCCTCACCG
AGTTCACCCCCACAGCCTGGTGGGCAAGGACTGCACGGACGGCGTCTGCAGGGTGCGGCTGCGG
CCTCATGTCAGCCCCCGGCACAGCCACCAGTGCCCCTTCCTGGAGGCAACTGAAGATATGCTCT
TTAACAACCTGGGCATCCAGTGCGTGAGGAAGAAGGAGATCGAGGCCGCCATCGAGCGGAAGAT
TCAGCTGGGCATCGACCCCTACAACGCTGGGTCCTTGAAGAACCATCAGGAGGTGGACATGAAT
GTCGTGAGGATCTGCTTCCAGGCCTCGTACAGGGACCCACAAGGACAGATGCGCCGGATGGACC
CTGTGCTCTCTGAGCCCGTCTACGACAAGAAGTCCACAAACACATCAGAGCTGCGGATCTGCCG
AATCAACAAGGAGAGCGGGCCATGCACGGGTGGTGAGGAGCTCTACCTGCTGTGTGACAAGGTG
CAGAAAGAGGACATCTCAGTGGTGTTCAGCAGAGCCTCCTGGGAAGGCCGGGCGGACTTCTCCC
AGGCCGACGTGCACCGCCAGATCGCCATCGTGTTCAAGACACCGCCCTACGAGGACCTGGAGAT
CGTTGAACCGGTGACAGTGAACGTGTTCCTGCAGCGGCTCACGGACGGGGTCTGCAGTGAGCCT
CTGCCCTTCACGTACCTGCCTCGGGACCACGACAGCTACGGAGTGGACAAGAAGCGGAAACGGG
GGATGCCTGACGTGCTTGGGGAGCTCAATAGCTCTGACCCCCATGGCATCGAGAGCAAACGACG
GAGGAAAAAGCCGGCCTTCCTGGATCACTTCCTGCCCAGCCATGGCTCAGGCCCGTTCCTCCCA
CCGTCAGCGCTGCTGCCAGACACAGACTTCTTCCCAGGCACTGTATCCCTCCCTGGCCTGGAGC
CCCCCGGCGGGCCGGATCTCCTGGACGATGGTTTTGCCTATGACCCTGCTGCCCCCACACTCTT
CACCATGCTGGACATGCTGCCCCCAGCGCCACCACTCTCCAGCGCTGTCGCGGGCAACGGGGGG
GCAGGGGCCCCGGTCGCGGAGCCCCCGGGCCCTGAGCCGCTGACGCTGGACTCGTACCAGGCCC
CGGGCTCCGGGGATGGAGGCACTGCCAGCCTCGTGGGCAGCAACATGTTCCCCAACCAGTACCG
CGAGGGGGGCTTTGGAAGCGGCCTCCTGTCCCCCGGGCCTGAGGCCACGTAGCCCCTGCGGCAC
TGGAGGAGAGGCACTGGGTGGGGAGGGTGGTGGAAGGGGCCGTGCAAACCCAACCGGGATGTCC
AGCACCCCCATCCCCTTGGGCTGCCCTTGGTCCGTCTTCCGACGTCCTCATCCTTCCTAATCGG
ACATCTTCAGTGCTGGAGAGAAACGCCGTAGCATCGGTTTCCCTTGAGCCCATTTTACAAATGA
GAAAACTGAGTCTGGAGAGGAAAAGGGGTTTGGCTTCCAAATACTAGCTCTTTAAAGTTGCCTC
AGCTGGGGTGCCTTCTCCCGGCGGATTCTAAAGTGTAAATAGGGGAGGGGGGCGCAGATCCCTA
GCCCTCCCTCCCCACGCCTGAAGGTGGGGGGGGTAATTGTTCACAGTCTTCCCAATAAAGACGA
ATTTTTGAGCCCGGGGGGGGTCTCATCTCTTCTGCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020950179	(Get FASTA)	NCBI Sequence Viewer
	XP_020950180	(Get FASTA)	NCBI Sequence Viewer
	XP_020950181	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000034265
	ENSSSCP00000034265.2
	ENSSSCP00015001768.1
	ENSSSCP00025024987.1
	ENSSSCP00030016714.1
	ENSSSCP00035040436.1
	ENSSSCP00040021602.1
	ENSSSCP00045045562.1
	ENSSSCP00050018127.1
	ENSSSCP00055008674.1
	ENSSSCP00060014103.1
	ENSSSCP00065000266.1

RefSeq Acc Id:	XP_020950180 ⟸ XM_021094521
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1UTH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSRRVARSSAAPELGALGSTDLSSLSLAVSRTTDELEIIDEYIKENGFGLEGAPPGAGEGLPR LVSRGAASLSTVTLGPAAPPATPPAWGCPLGRLVPPGPGPRPHLVITEQPKQRGMRFRYECEGR SAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGVCRVR LRPHVSPRHSFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVDMNVVRICFQASYR DPQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSR ASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPLPFTYLPRDHD SYGVDKKRKRGMPDVLGELNSSDPHGIESKRRRKKPAFLDHFLPSHGSGPFLPPSALLPDTDFF PGTVSLPGLEPPGGPDLLDDGFAYDPAAPTLFTMLDMLPPAPPLSSAVAGNGGAGAPVAEPPGP EPLTLDSYQAPGSGDGGTASLVGSNMFPNQYREGGFGSGLLSPGPEAT hide sequence

RefSeq Acc Id:	XP_020950181 ⟸ XM_021094522
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D1UTH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSRRVARSSAAPELGALGSTDLSSLSLAVSRTTDELEIIDEYIKENGFGLEGAPPGAGEGLPR LVSRGAASLSTVTLGPAAPPATPPAWGCPLGRLVPPGPGPRPHLVITEQPKQRGMRFRYECEGR SAGSILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGVCRVR LRPHVSPRHSHQCPFLEATEDMLFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVD MNVVRICFQASYRDPQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCD KVQKEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCS EPLPFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRRKKPAFLDHFLPSHGSGPF LPPSALLPDTDFFPGTVSLPGLEPPGGPDLLDDGFAYDPAAPTLFTMLDMLPPAPPLSSAVAGN GGAGAPVAEPPGPEPLTLDSYQAPGSGDGGTASLVGSNMFPNQYREGGFGSGLLSPGPEAT hide sequence

RefSeq Acc Id:	XP_020950179 ⟸ XM_021094520
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1B010 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSRRVARSSAAPELGALGSTDLSSLSLAVSRTTEIIDEYIKENGFGLEGAPPGAGEGLPRLVS RGAASLSTVTLGPAAPPATPPAWGCPLGRLVPPGPGPRPHLVITEQPKQRGMRFRYECEGRSAG SILGESSTEASKTLPAIELRDCGGLREVEVTACLVWKDWPHRVHPHSLVGKDCTDGVCRVRLRP HVSPRHSHQCPFLEATEDMLFNNLGIQCVRKKEIEAAIERKIQLGIDPYNAGSLKNHQEVDMNV VRICFQASYRDPQGQMRRMDPVLSEPVYDKKSTNTSELRICRINKESGPCTGGEELYLLCDKVQ KEDISVVFSRASWEGRADFSQADVHRQIAIVFKTPPYEDLEIVEPVTVNVFLQRLTDGVCSEPL PFTYLPRDHDSYGVDKKRKRGMPDVLGELNSSDPHGIESKRRRKKPAFLDHFLPSHGSGPFLPP SALLPDTDFFPGTVSLPGLEPPGGPDLLDDGFAYDPAAPTLFTMLDMLPPAPPLSSAVAGNGGA GAPVAEPPGPEPLTLDSYQAPGSGDGGTASLVGSNMFPNQYREGGFGSGLLSPGPEAT hide sequence

Ensembl Acc Id:

ENSSSCP00000034265 ⟸ ENSSSCT00000049320

Ensembl Acc Id:

ENSSSCP00000071652 ⟸ ENSSSCT00000086708

Protein Domains

RHD

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000038879	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015003642	UniProtKB/TrEMBL
	ENSSSCG00025043484	UniProtKB/TrEMBL
	ENSSSCG00030026195	UniProtKB/TrEMBL
	ENSSSCG00035071148	UniProtKB/TrEMBL
	ENSSSCG00040038951	UniProtKB/TrEMBL
	ENSSSCG00045037388	UniProtKB/TrEMBL
	ENSSSCG00050032765	UniProtKB/TrEMBL
	ENSSSCG00055005645	UniProtKB/TrEMBL
	ENSSSCG00060024234	UniProtKB/TrEMBL
	ENSSSCG00065000840	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000049320	ENTREZGENE
	ENSSSCT00000049320.3	UniProtKB/TrEMBL
	ENSSSCT00015004728.1	UniProtKB/TrEMBL
	ENSSSCT00025058941.1	UniProtKB/TrEMBL
	ENSSSCT00030036580.1	UniProtKB/TrEMBL
	ENSSSCT00035096127.1	UniProtKB/TrEMBL
	ENSSSCT00040052066.1	UniProtKB/TrEMBL
	ENSSSCT00045064488.1	UniProtKB/TrEMBL
	ENSSSCT00050043972.1	UniProtKB/TrEMBL
	ENSSSCT00055010980.1	UniProtKB/TrEMBL
	ENSSSCT00060032870.1	UniProtKB/TrEMBL
	ENSSSCT00065000994.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
	2.60.40.340	UniProtKB/TrEMBL
InterPro	Ig-like_fold	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
	IPT_dom	UniProtKB/TrEMBL
	IPT_NFkappaB	UniProtKB/TrEMBL
	NFkB/Dor	UniProtKB/TrEMBL
	p53-like_TF_DNA-bd	UniProtKB/TrEMBL
	RelB	UniProtKB/TrEMBL
	RelB_leu_zip	UniProtKB/TrEMBL
	RelB_transact	UniProtKB/TrEMBL
	RHD_CS	UniProtKB/TrEMBL
	RHD_dimer	UniProtKB/TrEMBL
	RHD_DNA_bind_dom	UniProtKB/TrEMBL
	RHD_DNA_bind_dom_sf	UniProtKB/TrEMBL
NCBI Gene	RELB	ENTREZGENE
PANTHER	PTHR24169	UniProtKB/TrEMBL
	PTHR24169:SF18	UniProtKB/TrEMBL
Pfam	RelB_leu_zip	UniProtKB/TrEMBL
	RelB_transactiv	UniProtKB/TrEMBL
	RHD_dimer	UniProtKB/TrEMBL
	RHD_DNA_bind	UniProtKB/TrEMBL
PRINTS	NFKBTNSCPFCT	UniProtKB/TrEMBL
PROSITE	REL_1	UniProtKB/TrEMBL
	REL_2	UniProtKB/TrEMBL
SMART	IPT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49417	UniProtKB/TrEMBL
	SSF81296	UniProtKB/TrEMBL
UniProt	A0A286ZS25_PIG	UniProtKB/TrEMBL
	A0A8D1B010	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1UTH5	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:92204	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI

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Imported Annotations - PID (archival)

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Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)