RELB (RELB proto-oncogene, NF-kB subunit) - Rat Genome Database

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Gene: RELB (RELB proto-oncogene, NF-kB subunit) Chlorocebus sabaeus
Analyze
Symbol: RELB
Name: RELB proto-oncogene, NF-kB subunit
RGD ID: 18524451
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to osmotic stress (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: transcription factor RelB
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1638,463,414 - 38,500,487 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607318,045,037 - 18,087,099 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RELB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1638,463,414 - 38,500,487 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607318,045,037 - 18,087,099 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
RELB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381945,001,464 - 45,038,192 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1945,001,461 - 45,038,192 (+)EnsemblGRCh38hg38GRCh38
GRCh371945,504,722 - 45,541,450 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361950,196,552 - 50,233,292 (+)NCBINCBI36Build 36hg18NCBI36
Build 341950,196,551 - 50,233,292NCBI
Celera1942,309,022 - 42,345,751 (+)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1941,935,689 - 41,971,666 (+)NCBIHuRef
CHM1_11945,507,785 - 45,544,777 (+)NCBICHM1_1
T2T-CHM13v2.01947,826,284 - 47,863,291 (+)NCBIT2T-CHM13v2.0
Relb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39719,340,142 - 19,363,352 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl719,340,142 - 19,363,363 (-)EnsemblGRCm39 Ensembl
GRCm38719,606,217 - 19,629,438 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl719,606,217 - 19,629,438 (-)EnsemblGRCm38mm10GRCm38
MGSCv37720,191,571 - 20,214,787 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36718,764,744 - 18,787,960 (-)NCBIMGSCv36mm8
Celera717,011,812 - 17,035,368 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.93NCBI
Relb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8188,385,717 - 88,413,380 (-)NCBIGRCr8
mRatBN7.2179,257,738 - 79,285,490 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl179,257,725 - 79,285,507 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0180,517,081 - 80,545,019 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl180,517,411 - 80,544,825 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0181,783,102 - 81,810,793 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera173,717,263 - 73,744,749 (-)NCBICelera
Cytogenetic Map1q21NCBI
Relb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555552,060,533 - 2,086,229 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555552,060,533 - 2,086,229 (+)NCBIChiLan1.0ChiLan1.0
RELB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,160,728 - 51,199,294 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,032,147 - 53,070,712 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01941,948,559 - 41,987,121 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11950,563,164 - 50,590,627 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1950,554,864 - 50,590,223 (+)Ensemblpanpan1.1panPan2
RELB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11110,436,677 - 110,466,709 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1110,436,662 - 110,466,809 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1109,917,954 - 109,947,957 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01110,966,408 - 110,996,642 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1110,966,393 - 110,996,550 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11110,641,652 - 110,671,422 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01110,277,051 - 110,306,823 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01111,145,641 - 111,175,691 (-)NCBIUU_Cfam_GSD_1.0
Relb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934917,222,260 - 17,249,483 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367061,569,756 - 1,596,456 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367061,569,603 - 1,596,831 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RELB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl651,444,664 - 51,480,319 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1651,444,670 - 51,480,350 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Relb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249071,806,874 - 1,829,417 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249071,806,784 - 1,829,686 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_007997162   ⟹   XP_007995353
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1638,463,414 - 38,500,487 (+)NCBI
Vero_WHO_p1.0NW_02366607318,045,038 - 18,087,099 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007997163   ⟹   XP_007995354
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1638,463,468 - 38,500,487 (+)NCBI
Vero_WHO_p1.0NW_02366607318,045,037 - 18,087,099 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007995353 (Get FASTA)   NCBI Sequence Viewer  
  XP_007995354 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_007995353   ⟸   XM_007997162
- Peptide Label: isoform X1
RefSeq Acc Id: XP_007995354   ⟸   XM_007997163
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene RELB ENTREZGENE