SIRPB1 (signal regulatory protein beta 1) - Rat Genome Database

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Gene: SIRPB1 (signal regulatory protein beta 1) Homo sapiens
Analyze
Symbol: SIRPB1
Name: signal regulatory protein beta 1
RGD ID: 1347883
HGNC Page HGNC:15928
Description: Predicted to be involved in positive regulation of T cell activation and positive regulation of phagocytosis. Predicted to act upstream of or within intracellular signal transduction. Predicted to be located in cell surface and secretory granule membrane. Predicted to be active in plasma membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CD172 antigen-like family member B; CD172b; DKFZp686A05192; FLJ26614; signal-regulatory protein beta 1; signal-regulatory protein beta-1; SIRB1; SIRP-BETA-1
RGD Orthologs
Mouse
Bonobo
Dog
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38201,561,385 - 1,620,009 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl201,561,385 - 1,620,061 (-)EnsemblGRCh38hg38GRCh38
GRCh37201,542,031 - 1,600,655 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36201,493,029 - 1,548,689 (-)NCBINCBI36Build 36hg18NCBI36
Build 34201,491,567 - 1,548,630NCBI
Celera201,641,380 - 1,664,813 (-)NCBICelera
Cytogenetic Map20p13NCBI
HuRef201,495,948 - 1,550,316 (-)NCBIHuRef
CHM1_1201,544,992 - 1,600,726 (-)NCBICHM1_1
T2T-CHM13v2.0201,610,569 - 1,636,143 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 43 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SIRPB1Human1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene multiple interactionsISORGD:16155646480464[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...CTDPMID:25510870
SIRPB1Human17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with Bucladesine co-treated with Medroxyprogesterone Acetate] results in decreased expression of SIRPB1 mRNA; more ...CTDPMID:20823114|PMID:22217510
SIRPB1Human2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISORGD:16155646480464[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...CTDPMID:25510870
SIRPB1Human2,2',5,5'-tetrachlorobiphenyl multiple interactionsISORGD:16155646480464[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...CTDPMID:25510870
SIRPB1Human2,4,4'-trichlorobiphenyl multiple interactionsISORGD:16155646480464[2,4,4'-trichlorobiphenyl co-treated with 2,5,2',5'-tetrachlorobiphenyl co-treated with 2,4,5,2',5'-pentachlorobiphenyl co-treated with 2,2',3',4,4',5-hexachlorobiphenyl co-treated with 2,4,5,2',4',5'-hexachlorobiphenyl co-treated with more ...CTDPMID:25510870
SIRPB1Human5-azacytidine decreases expressionEXP 6480464Azacitidine results in decreased expression of SIRPB1 mRNACTDPMID:20823114
SIRPB1Humanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of SIRPB1 exonCTDPMID:30157460
SIRPB1Humanall-trans-retinoic acid increases expressionEXP 6480464Tretinoin results in increased expression of SIRPB1 mRNACTDPMID:33167477
SIRPB1Humanantirheumatic drug decreases expressionEXP 6480464Antirheumatic Agents results in decreased expression of SIRPB1 mRNACTDPMID:24449571
SIRPB1Humanarsenite(3-) multiple interactionsEXP 6480464arsenite inhibits the reaction [G3BP1 protein binds to SIRPB1 mRNA]CTDPMID:32406909
SIRPB1Humanbenzo[a]pyrene increases expressionISORGD:16155646480464Benzo(a)pyrene results in increased expression of SIRPB1 mRNACTDPMID:22228805
SIRPB1Humanbenzo[a]pyrene affects methylationEXP 6480464Benzo(a)pyrene affects the methylation of SIRPB1 promoterCTDPMID:27901495
SIRPB1Humanbenzo[e]pyrene decreases methylationEXP 6480464benzo(e)pyrene results in decreased methylation of SIRPB1 exonCTDPMID:30157460
SIRPB1Humanbucladesine multiple interactionsEXP 6480464[Estradiol co-treated with Bucladesine co-treated with Medroxyprogesterone Acetate] results in decreased expression of SIRPB1 mRNACTDPMID:20823114
SIRPB1Humancarbon nanotube increases expressionISORGD:16155646480464Nanotubes, Carbon analog results in increased expression of SIRPB1A mRNA; Nanotubes, Carbon results in increased more ...CTDPMID:25554681|PMID:25620056
SIRPB1Humancholine multiple interactionsISORGD:16155646480464[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression more ...CTDPMID:20938992
SIRPB1Humanchromium(6+) multiple interactionsEXP 6480464[zinc chromate results in increased abundance of chromium hexavalent ion] which results in increased expression more ...CTDPMID:38479592
SIRPB1Humanclothianidin increases expressionEXP 6480464clothianidin results in increased expression of SIRPB1 mRNACTDPMID:31626844
SIRPB1Humancopper(II) sulfate increases expressionEXP 6480464Copper Sulfate results in increased expression of SIRPB1 mRNACTDPMID:19549813
SIRPB1HumanDibutyl phosphate affects expressionEXP 6480464di-n-butylphosphoric acid affects the expression of SIRPB1 mRNACTDPMID:37042841

1 to 20 of 43 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SIRPB1Humancell surface receptor signaling pathway involved_inTAS 150520179 PMID:9062191PINCPMID:9062191
SIRPB1Humanestablishment of localization in cell acts_upstream_ofISORGD:16155649068941 PMID:15123631MGIPMID:15123631
SIRPB1Humanintracellular signal transduction acts_upstream_of_or_withinISORGD:16155649068941 PMID:15123631MGIPMID:15123631
SIRPB1Humanphagocytosis acts_upstream_ofISORGD:16155649068941 PMID:15123631MGIPMID:15123631
SIRPB1Humanpositive regulation of phagocytosis involved_inIBAMGI:108563|PANTHER:PTN000463164150520179 GO_CentralGO_REF:0000033
SIRPB1Humanpositive regulation of phagocytosis acts_upstream_of_or_withinISORGD:16155649068941 PMID:15123631MGIPMID:15123631
SIRPB1Humanpositive regulation of T cell activation involved_inIBAPANTHER:PTN000463164|UniProtKB:Q9P1W8150520179 GO_CentralGO_REF:0000033
SIRPB1Humansignal transduction involved_inTAS 150520179 PMID:9062191PINCPMID:9062191

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SIRPB1Humancell surface located_inTAS 150520179 PMID:25795378ARUK-UCLPMID:25795378
SIRPB1Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
SIRPB1Humanmembrane located_inIEAUniProtKB-SubCell:SL-0162150520179 UniProtGO_REF:0000044
SIRPB1Humanplasma membrane located_inIEAUniProtKB-KW:KW-1003150520179 UniProtGO_REF:0000043
SIRPB1Humanplasma membrane located_inIEAUniProtKB-SubCell:SL-0039150520179 UniProtGO_REF:0000044
SIRPB1Humanplasma membrane located_inTAS 150520179 PMID:9062191ReactomePMID:9062191|Reactome:R-HSA-210274|Reactome:R-HSA-6798743
SIRPB1Humanplasma membrane is_active_inIBAMGI:108563|MGI:2444824|PANTHER:PTN001072596|UniProtKB:P78324150520179 GO_CentralGO_REF:0000033
SIRPB1Humansecretory granule membrane located_inTAS 150520179 ReactomeReactome:R-HSA-6798743

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SIRPB1Humanprotein binding enablesIPIUniProtKB:P02654|UniProtKB:Q9NP55|UniProtKB:Q9NWB1-5150520179 PMID:32296183IntActPMID:32296183
SIRPB1Humanprotein binding enablesIPIUniProtKB:O75553|UniProtKB:P50222|UniProtKB:Q93062150520179 PMID:25416956IntActPMID:25416956
SIRPB1Humanprotein binding enablesIPIUniProtKB:O43914150520179 PMID:10940905IntActPMID:10940905


#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:9062191   PMID:10604985   PMID:10940905   PMID:11780052   PMID:12213963   PMID:12415263   PMID:12477932   PMID:15342556   PMID:15489334   PMID:16081415   PMID:16335952   PMID:16339511  
PMID:16344560   PMID:17207965   PMID:19034380   PMID:19165527   PMID:19893026   PMID:21873635   PMID:22360420   PMID:23376485   PMID:23383108   PMID:25039969   PMID:25416956   PMID:25795378  
PMID:31349540   PMID:31753913   PMID:32296183   PMID:33961781   PMID:34349018   PMID:36215168   PMID:38334954   PMID:38427484   PMID:38594692  



SIRPB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38201,561,385 - 1,620,009 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl201,561,385 - 1,620,061 (-)EnsemblGRCh38hg38GRCh38
GRCh37201,542,031 - 1,600,655 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36201,493,029 - 1,548,689 (-)NCBINCBI36Build 36hg18NCBI36
Build 34201,491,567 - 1,548,630NCBI
Celera201,641,380 - 1,664,813 (-)NCBICelera
Cytogenetic Map20p13NCBI
HuRef201,495,948 - 1,550,316 (-)NCBIHuRef
CHM1_1201,544,992 - 1,600,726 (-)NCBICHM1_1
T2T-CHM13v2.0201,610,569 - 1,636,143 (-)NCBIT2T-CHM13v2.0
Sirpb1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39315,436,887 - 15,491,487 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl315,436,713 - 15,491,580 (-)EnsemblGRCm39 Ensembl
GRCm38315,371,661 - 15,426,522 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl315,371,653 - 15,426,520 (-)EnsemblGRCm38mm10GRCm38
MGSCv37315,371,827 - 15,426,427 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36315,348,563 - 15,403,248 (-)NCBIMGSCv36mm8
Cytogenetic Map3A1NCBI
SIRPB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2212,606,496 - 2,633,886 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1202,603,324 - 2,630,705 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0201,728,587 - 1,753,389 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1201,494,703 - 1,519,056 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl201,494,726 - 1,546,925 (-)Ensemblpanpan1.1panPan2
LOC485809
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12419,436,981 - 19,449,431 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2419,143,424 - 19,161,341 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02420,121,537 - 20,139,731 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12419,393,067 - 19,410,993 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02419,502,785 - 19,521,895 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02419,933,951 - 19,952,136 (+)NCBIUU_Cfam_GSD_1.0

.

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Variants in SIRPB1
56 total Variants

1 to 10 of 96 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 20p13(chr20:89939-1852477)x1 copy number loss See cases [RCV000050373] Chr20:89939..1852477 [GRCh38]
Chr20:70580..1833123 [GRCh37]
Chr20:18580..1781123 [NCBI36]
Chr20:20p13		 pathogenic
GRCh38/hg38 20p13-11.21(chr20:89939-25697564)x3 copy number gain See cases [RCV000051227] Chr20:89939..25697564 [GRCh38]
Chr20:70580..25678200 [GRCh37]
Chr20:18580..25626200 [NCBI36]
Chr20:20p13-11.21		 pathogenic
GRCh38/hg38 20p13-11.23(chr20:89939-19146279)x3 copy number gain See cases [RCV000051041] Chr20:89939..19146279 [GRCh38]
Chr20:70580..19126923 [GRCh37]
Chr20:18580..19074923 [NCBI36]
Chr20:20p13-11.23		 pathogenic
GRCh38/hg38 20p13(chr20:89939-1939218)x1 copy number loss See cases [RCV000052735] Chr20:89939..1939218 [GRCh38]
Chr20:70580..1919864 [GRCh37]
Chr20:18580..1867864 [NCBI36]
Chr20:20p13		 pathogenic
GRCh38/hg38 20p13(chr20:89939-1770567)x1 copy number loss See cases [RCV000052736] Chr20:89939..1770567 [GRCh38]
Chr20:70580..1751213 [GRCh37]
Chr20:18580..1699213 [NCBI36]
Chr20:20p13		 pathogenic
GRCh38/hg38 20p13(chr20:89939-1668795)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052737]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052737]|See cases [RCV000052737] Chr20:89939..1668795 [GRCh38]
Chr20:70580..1649441 [GRCh37]
Chr20:18580..1597441 [NCBI36]
Chr20:20p13		 pathogenic
GRCh38/hg38 20p13(chr20:121781-2290194)x1 copy number loss See cases [RCV000052738] Chr20:121781..2290194 [GRCh38]
Chr20:102422..2270840 [GRCh37]
Chr20:50422..2218840 [NCBI36]
Chr20:20p13		 pathogenic
GRCh38/hg38 20p13(chr20:1551830-1883860)x3 copy number gain See cases [RCV000052757] Chr20:1551830..1883860 [GRCh38]
Chr20:1532476..1864506 [GRCh37]
Chr20:1480476..1812506 [NCBI36]
Chr20:20p13		 uncertain significance
GRCh38/hg38 20p13-11.23(chr20:89939-19071495)x3 copy number gain See cases [RCV000052995] Chr20:89939..19071495 [GRCh38]
Chr20:70580..19052139 [GRCh37]
Chr20:18580..19000139 [NCBI36]
Chr20:20p13-11.23		 pathogenic
GRCh38/hg38 20p13-11.22(chr20:89939-21787252)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052996]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052996]|See cases [RCV000052996] Chr20:89939..21787252 [GRCh38]
Chr20:70580..21767890 [GRCh37]
Chr20:18580..21715890 [NCBI36]
Chr20:20p13-11.22		 pathogenic
1 to 10 of 96 rows

Predicted Target Of
Summary Value
Count of predictions:5585
Count of miRNA genes:1089
Interacting mature miRNAs:1316
Transcripts:ENST00000262929, ENST00000279477, ENST00000381596, ENST00000381603, ENST00000381605, ENST00000562014, ENST00000563840, ENST00000565076, ENST00000565087, ENST00000565230, ENST00000565775, ENST00000566055, ENST00000568365, ENST00000569387, ENST00000569629
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 23 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597119159GWAS1215233_Hblood protein measurement QTL GWAS1215233 (human)2e-273blood protein amount (VT:0005416)blood protein measurement (CMO:0000028)2015652111565212Human
597284537GWAS1380611_Htyrosine-protein phosphatase non-receptor type substrate 1 measurement QTL GWAS1380611 (human)7e-12tyrosine-protein phosphatase non-receptor type substrate 1 measurement2015717841571785Human
597322714GWAS1418788_Hlevel of tyrosine-protein phosphatase non-receptor type substrate 1 in blood serum QTL GWAS1418788 (human)4e-45level of tyrosine-protein phosphatase non-receptor type substrate 1 in blood serum2015717841571785Human
597187641GWAS1283715_Hmitochondrial DNA measurement QTL GWAS1283715 (human)8e-10mitochondrial DNA measurement2015708391570840Human
597119158GWAS1215232_Hblood protein measurement QTL GWAS1215232 (human)2e-204blood protein amount (VT:0005416)blood protein measurement (CMO:0000028)2015773081577309Human
597119157GWAS1215231_Hblood protein measurement QTL GWAS1215231 (human)6e-145blood protein amount (VT:0005416)blood protein measurement (CMO:0000028)2015660961566097Human
597171035GWAS1267109_Hsignal-regulatory protein beta-1 measurement QTL GWAS1267109 (human)5e-395signal-regulatory protein beta-1 measurement2015773081577309Human
597169947GWAS1266021_Hprotein measurement QTL GWAS1266021 (human)4e-27protein measurement2016164041616405Human
597091189GWAS1187263_Hmonocyte count QTL GWAS1187263 (human)4e-17monocyte quantity (VT:0000223)blood monocyte count (CMO:0000032)2016166091616610Human
597038194GWAS1134268_Hgut microbiome measurement QTL GWAS1134268 (human)0.000002gut microbiome measurement2015662651566266Human

1 to 10 of 23 rows
SIRPB1__6838  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37201,543,473 - 1,544,240UniSTSGRCh37
Build 36201,491,473 - 1,492,240RGDNCBI36
Celera201,639,824 - 1,640,591RGD
HuRef201,494,392 - 1,495,159UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
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Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
1204 2352 2770 2219 4790 1711 2241 3 615 1675 454 2138 6898 6162 34 3676 1 827 1686 1518 173


1 to 30 of 38 rows
RefSeq Transcripts NM_001083910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001135844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001329157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001330639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005260641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005260643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011529134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017027584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001754121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007067441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK130124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL049634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL138804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL592544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC131747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM010247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM285386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP268958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP295274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP300244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 38 rows

Ensembl Acc Id: ENST00000262929   ⟹   ENSP00000262929
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,564,384 - 1,588,632 (-)Ensembl
Ensembl Acc Id: ENST00000279477   ⟹   ENSP00000279477
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,597,340 - 1,620,009 (-)Ensembl
Ensembl Acc Id: ENST00000381596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,604,975 - 1,619,986 (-)Ensembl
Ensembl Acc Id: ENST00000381603   ⟹   ENSP00000371016
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,564,383 - 1,619,996 (-)Ensembl
Ensembl Acc Id: ENST00000381605   ⟹   ENSP00000371018
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,561,385 - 1,620,009 (-)Ensembl
Ensembl Acc Id: ENST00000562014   ⟹   ENSP00000455568
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,597,340 - 1,605,006 (-)Ensembl
Ensembl Acc Id: ENST00000563840   ⟹   ENSP00000456351
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,566,230 - 1,588,747 (-)Ensembl
Ensembl Acc Id: ENST00000565076   ⟹   ENSP00000457829
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,570,517 - 1,571,912 (-)Ensembl
Ensembl Acc Id: ENST00000565087   ⟹   ENSP00000457855
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,597,340 - 1,603,930 (-)Ensembl
Ensembl Acc Id: ENST00000565230   ⟹   ENSP00000456747
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,597,340 - 1,604,142 (-)Ensembl
Ensembl Acc Id: ENST00000565775
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,578,150 - 1,620,061 (-)Ensembl
Ensembl Acc Id: ENST00000566055   ⟹   ENSP00000457458
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,597,340 - 1,603,930 (-)Ensembl
Ensembl Acc Id: ENST00000568365   ⟹   ENSP00000456826
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,597,747 - 1,620,009 (-)Ensembl
Ensembl Acc Id: ENST00000569387   ⟹   ENSP00000456519
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,597,340 - 1,603,930 (-)Ensembl
Ensembl Acc Id: ENST00000569629   ⟹   ENSP00000457323
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl201,565,205 - 1,611,420 (-)Ensembl
RefSeq Acc Id: NM_001083910   ⟹   NP_001077379
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,561,385 - 1,620,009 (-)NCBI
GRCh37201,545,029 - 1,600,720 (-)NCBI
Build 36201,493,029 - 1,548,689 (-)NCBI Archive
Celera201,641,380 - 1,664,813 (-)RGD
HuRef201,495,948 - 1,550,316 (-)RGD
CHM1_1201,544,992 - 1,600,726 (-)NCBI
T2T-CHM13v2.0201,610,569 - 1,636,143 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001135844   ⟹   NP_001129316
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,597,340 - 1,620,009 (-)NCBI
GRCh37201,545,029 - 1,600,720 (-)NCBI
HuRef201,495,948 - 1,550,316 (-)RGD
CHM1_1201,545,642 - 1,600,726 (-)NCBI
T2T-CHM13v2.0201,614,217 - 1,636,143 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001329157   ⟹   NP_001316086
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,597,340 - 1,620,009 (-)NCBI
T2T-CHM13v2.0201,614,217 - 1,636,143 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001330639   ⟹   NP_001317568
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,561,385 - 1,588,697 (-)NCBI
T2T-CHM13v2.0201,610,569 - 1,636,143 (-)NCBI
Sequence:
RefSeq Acc Id: NM_006065   ⟹   NP_006056
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,561,385 - 1,620,009 (-)NCBI
GRCh37201,545,029 - 1,600,720 (-)NCBI
Build 36201,493,029 - 1,548,689 (-)NCBI Archive
Celera201,641,380 - 1,664,813 (-)RGD
HuRef201,495,948 - 1,550,316 (-)RGD
CHM1_1201,544,992 - 1,600,726 (-)NCBI
T2T-CHM13v2.0201,610,569 - 1,636,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005260641   ⟹   XP_005260698
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,561,385 - 1,588,697 (-)NCBI
GRCh37201,545,029 - 1,600,720 (-)NCBI
Sequence:
RefSeq Acc Id: XR_007067441
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,598,822 - 1,620,009 (-)NCBI
1 to 5 of 19 rows
1 to 5 of 19 rows
RefSeq Acc Id: NP_001077379   ⟸   NM_001083910
- Peptide Label: isoform 2 precursor
- UniProtKB: A2RRP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_006056   ⟸   NM_006065
- Peptide Label: isoform 1 precursor
- UniProtKB: Q9H1U5 (UniProtKB/Swiss-Prot),   Q8TB12 (UniProtKB/Swiss-Prot),   Q5TFR0 (UniProtKB/Swiss-Prot),   Q5TFQ9 (UniProtKB/Swiss-Prot),   B2R8V0 (UniProtKB/Swiss-Prot),   A6NLM2 (UniProtKB/Swiss-Prot),   Q9Y4V0 (UniProtKB/Swiss-Prot),   O00241 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001129316   ⟸   NM_001135844
- Peptide Label: isoform 3 precursor
- UniProtKB: Q7Z3B9 (UniProtKB/Swiss-Prot),   Q5TFQ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005260698   ⟸   XM_005260641
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001317568   ⟸   NM_001330639
- Peptide Label: isoform 4 precursor
- UniProtKB: H9KV29 (UniProtKB/TrEMBL),   A2RRP5 (UniProtKB/TrEMBL)
- Sequence:
Ig-like   Ig-like C1-type   Ig-like V-type

Name Modeler Protein Id AA Range Protein Structure
AF-O00241-F1-model_v2 AlphaFold O00241 1-398 view protein structure

RGD ID:6799054
Promoter ID:HG_KWN:38345
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:NB4
Transcripts:ENST00000279477,   ENST00000381595,   ENST00000381596,   ENST00000381599,   ENST00000381603,   OTTHUMT00000077555
Position:
Human AssemblyChrPosition (strand)Source
Build 36201,548,436 - 1,548,936 (-)MPROMDB
RGD ID:13206137
Promoter ID:EPDNEW_H26649
Type:multiple initiation site
Name:SIRPB1_3
Description:signal regulatory protein beta 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26650  EPDNEW_H26651  EPDNEW_H26652  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,570,858 - 1,570,918EPDNEW
RGD ID:13206139
Promoter ID:EPDNEW_H26650
Type:initiation region
Name:SIRPB1_2
Description:signal regulatory protein beta 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26649  EPDNEW_H26651  EPDNEW_H26652  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,588,697 - 1,588,757EPDNEW
RGD ID:13206141
Promoter ID:EPDNEW_H26651
Type:multiple initiation site
Name:SIRPB1_4
Description:signal regulatory protein beta 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26649  EPDNEW_H26650  EPDNEW_H26652  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,597,909 - 1,597,969EPDNEW
RGD ID:13206143
Promoter ID:EPDNEW_H26652
Type:initiation region
Name:SIRPB1_1
Description:signal regulatory protein beta 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26649  EPDNEW_H26650  EPDNEW_H26651  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38201,620,009 - 1,620,069EPDNEW


1 to 40 of 63 rows
Database
Acc Id
Source(s)
COSMIC SIRPB1 COSMIC
Ensembl Genes ENSG00000101307 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000262929 ENTREZGENE
  ENST00000279477 ENTREZGENE
  ENST00000279477.11 UniProtKB/Swiss-Prot
  ENST00000381603 ENTREZGENE
  ENST00000381603.7 UniProtKB/Swiss-Prot
  ENST00000381605 ENTREZGENE
  ENST00000381605.9 UniProtKB/Swiss-Prot
  ENST00000568365 ENTREZGENE
  ENST00000568365.1 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
GTEx ENSG00000101307 GTEx
HGNC ID HGNC:15928 ENTREZGENE
Human Proteome Map SIRPB1 Human Proteome Map
InterPro Ig-like_CS_Receptor UniProtKB/Swiss-Prot
  Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_C1-set UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_V-set UniProtKB/Swiss-Prot
KEGG Report hsa:10326 UniProtKB/Swiss-Prot
NCBI Gene 10326 ENTREZGENE
OMIM 603889 OMIM
PANTHER SIGNAL-REGULATORY PROTEIN BETA UniProtKB/Swiss-Prot
Pfam C1-set UniProtKB/Swiss-Prot
  V-set UniProtKB/Swiss-Prot
PharmGKB PA38051 PharmGKB
PROSITE IG_LIKE UniProtKB/Swiss-Prot
SMART IGc1 UniProtKB/Swiss-Prot
  IGv UniProtKB/Swiss-Prot
  SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
UniProt A2RRP5 ENTREZGENE, UniProtKB/TrEMBL
  A6NLM2 ENTREZGENE
  B2R8V0 ENTREZGENE
  H3BQ21_HUMAN UniProtKB/TrEMBL
  H3BRP9_HUMAN UniProtKB/TrEMBL
  H3BSK5_HUMAN UniProtKB/TrEMBL
1 to 40 of 63 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-26 SIRPB1  signal regulatory protein beta 1  SIRPB1  signal-regulatory protein beta 1  Symbol and/or name change 5135510 APPROVED