Advanced Search (OLGA)

Gene: LOC102161654 (tyrosine-protein phosphatase non-receptor type substrate 1) Sus scrofa

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Analyze

No known orthologs.

Symbol:

LOC102161654

Name:

tyrosine-protein phosphatase non-receptor type substrate 1

RGD ID:

13935906

Description:

FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

signal-regulatory protein beta 1; signal-regulatory protein beta-1; SIRPB1

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	17	33,735,808 - 33,756,077 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	37,981,502 - 38,001,768 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LOC102161654	Pig	positive regulation of phagocytosis	involved_in	IBA	MGI:108563 and PANTHER:PTN000463164	150520179		GO_Central	GO_REF:0000033
LOC102161654	Pig	positive regulation of T cell activation	involved_in	IBA	PANTHER:PTN000463164 and UniProtKB:Q9P1W8	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LOC102161654	Pig	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
LOC102161654	Pig	plasma membrane	is_active_in	IBA	MGI:108563 more ...	150520179		GO_Central	GO_REF:0000033

PMID:30032202

Variants in LOC102161654
945 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	14	3	2	5	14	12	14	3	5	3


RefSeq Transcripts	XM_013985182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013985183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013985184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013985185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021077522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021077523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU407174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBZA01000586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_013985182 ⟹ XP_013840636

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	33,735,808 - 33,751,681 (+)	NCBI

Sequence:

show sequence

GCTTCTCTCCTCTCCACAGAGCACAGAAGTCCAGTTCTCACCAGGACACACATTTGGACAGACCAGGCTCCTCAGGTCTCCACAATGCCCATCCCTCCTCCTTGCCTGCTGCTGATTCTAATGCTGGG
ACTCACAGGAGCAGCAGGTGAGGAGGGGCTGCAGGTGCTTCAGCCTGAGAGGTCCGTGTCTGTCGCAGCTGGAGAGACGGCCACTCTGCCCTGCACTGTGACCTCCCTGATCCCCACTGGGCCCTTGA
GGTGGTTCAAGGGAGCAGGACCAGCCCGGGAGTTAATCTACGATTTCAAAGGAGATCCTCGGGGCCACTCCCCCCGAGTAACAAATGCTTCAGATGTCACGAGAAGAGACAACAAGGACTTTTCCATC
CGCATCTGGAACATCACCCCAGCAGACGCCGGGACCTACTACTGTGTGAAGTTCCGGAGAGAGAGCCCTGCGGACGTGGAGTTTAGGTCTGGGCCAGGCACTCAGCTCACTGTGAGTGCCAAGCCCTC
TCGGCCCGTGGTCTCAGGCCCTGCGGCGAGGGCCACACCTGAGCAGACAGTGCGCTTCACCTGCAAATCCCACGGCTTCTCCCCCAGAAACATCTCCCTGAAATGGTTCAAAAATGGCAATGAGCTCC
CAGCCTCCCAGACCAGCGTGGAGCCCGAGGGAAACGTTTCCTACAGCATCTCCAGCACCACCGAGGTGCTGCTGGCCCCGGGGGATGTGCACTCCCAGGTCATCTGCGAGGTGGCCCACGTCACCCTG
CAAGGGGGCCCTCCTCTCCGTGGAACTGCCAACTTGTCTGAGATCATCCGAGTTCCACCCACCCTGGAGGTTACCCAACAGCCCCCGACGGGGAGCCAGGTGAATGTCACCTGCCTGGTGAAGAAGTT
CTACCCCCAGCGCCTACAGCTGACCTGGCTGGAGAACGGAACCGTGTCCCGGACAGAAACGGCCTCGACCCTCATGGAGAACAAGGATGGGACCTTCACCCGGACCAGCTGGCTCCTGGTGAACTCAT
CTGCCCACAGGGAGGCCCTGCTGCTCACCTGCCAGGTGGAGCATGACGGGCAGCCGGCGGTCACCAGAAACTATGCCCTGGAGGCTTATGTCCACCAGAAGGAACAAGACACAGACGTCTGTACCTAC
TGCTCTGTGAACTTCTGGAAGGGGCGCTCTGAAGACTGTGAAGTTGGAGTCTGGGCCAGGCACTGGGGTGACCGAGAGGGGTCCATGTCCAGACCTGCTTTGTCGCTGATTTGTGACAGTGGAGCAGC
AGGGATCCCAGGTGCTCACTGCACATTTACTAAACACAAATCTCTCTGCAGTGGTGATCTCCTTTCCTGCTTCCACCACCCTGAGGGTTTGGACTTTACAGAAGGGACTCGGGAAGCAGTGGGCCTGA
TGGGGTGGAAGATGGCTTGCTTTTAGTCCAGGTGATTGGGCTGAACGCAACAAGGTAAAGCTGCCTCTCTGAGGACAGAAAACACCAGCCTGCACAATGGGTAGGTACTATGCAGAGGCAGGTTCCCC
TGAGCCGGGCTTCTGCCAAGGTCACGGGGGGGATCCCCTTTCTATGACAAAAACGTGTCTTCTCACATAACATCAGGAGAAGGTCAAGTGGATTTCCAGGAATCTTTACTCCAGGGGAACTTTCAAAG
GCCCAGAGTCCTTCCCAGGGGCCCTTTGCTTGTCCTCATCTGTGGAGTCAACACTAGTTCATCCAGAGTCTCTGTCCCTCTGCCTGCTGGAGGAAGAAAGGGAGGAAGGGGAGGAGCACCCACTTCCC
TTACACCAGAGATACAGAGAAGTTGCATCATTGTGTCCACTCATGACTTAGTCCTGTGTGCACATGCCCAGGGCCAAAGAGCCCACAGTTGCGTGGTCCTATGATTACGAACATGGATCATCTCAAAA
CCATTACACACTTGGTAAAATAAACAATAATTCCCTTATA

hide sequence

RefSeq Acc Id:

XM_013985183 ⟹ XP_013840637

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	33,735,808 - 33,756,077 (+)	NCBI

Sequence:

show sequence

GCTTCTCTCCTCTCCACAGAGCACAGAAGTCCAGTTCTCACCAGGACACACATTTGGACAGACC
AGGCTCCTCAGGTCTCCACAATGCCCATCCCTCCTCCTTGCCTGCTGCTGATTCTAATGCTGGGACTCACAGGAGCAGCAGGTGAGGAGGGGCTGCAGGTGCTTCAGCCTGAGAGGTCCGTGTCTGTC
GCAGCTGGAGAGACGGCCACTCTGCCCTGCACTGTGACCTCCCTGATCCCCACTGGGCCCTTGAGGTGGTTCAAGGGAGCAGGACCAGCCCGGGAGTTAATCTACGATTTCAAAGGAGATCCTCGGGG
CCACTCCCCCCGAGTAACAAATGCTTCAGATGTCACGAGAAGAGACAACAAGGACTTTTCCATCCGCATCTGGAACATCACCCCAGCAGACGCCGGGACCTACTACTGTGTGAAGTTCCGGAGAGAGA
GCCCTGCGGACGTGGAGTTTAGGTCTGGGCCAGGCACTCAGCTCACTGTGAGTGCCAAGCCCTCTCGGCCCGTGGTCTCAGGCCCTGCGGCGAGGGCCACACCTGAGCAGACAGTGCGCTTCACCTGC
AAATCCCACGGCTTCTCCCCCAGAAACATCTCCCTGAAATGGTTCAAAAATGGCAATGAGCTCCCAGCCTCCCAGACCAGCGTGGAGCCCGAGGGAAACGTTTCCTACAGCATCTCCAGCACCACCGA
GGTGCTGCTGGCCCCGGGGGATGTGCACTCCCAGGTCATCTGCGAGGTGGCCCACGTCACCCTGCAAGGGGGCCCTCCTCTCCGTGGAACTGCCAACTTGTCTGAGATCATCCGAGTTCCACCCACCC
TGGAGGTTACCCAACAGCCCCCGACGGGGAGCCAGGTGAATGTCACCTGCCTGGTGAAGAAGTTCTACCCCCAGCGCCTACAGCTGACCTGGCTGGAGAACGGAACCGTGTCCCGGACAGAAACGGCC
TCGACCCTCATGGAGAACAAGGATGGGACCTTCACCCGGACCAGCTGGCTCCTGGTGAACTCATCTGCCCACAGGGAGGCCCTGCTGCTCACCTGCCAGGTGGAGCATGACGGGCAGCCGGCGGTCAC
CAGAAACTATGCCCTGGAGGCTTATGTCCACCAGAAGGAACAAGACACAGGTGGAAATCATGACGTCTGTACCTACTGCTCTGTGAACTTCTGGAAGGGGCGCTCTGAAGACTGTGAAGTTGGAGTCT
GGGCCAGGCACTGGGGTGACCGAGAGGGGTCCATGTCCAGACCTGCTTTGTCGCTGATTTGTGACAGTGGAGCAGCAGGGATCCCAGACCAAAAGATAGCTTGTCCTCTCCTAGTAACTCTTGTCCTA
GTGCTGAAGGCCCTGCAGCTGGTGGGTGTCTCTGTCATCTTTGTCCACAAGAAGTTTTGGACCTGACCCTCCTTCCTCACCCCCTTGCTGGTGTCACTCTCCATCTCGCCTGCCTCATTCTCGCCTGA
GGGGCCCAGCCCAGGAGAAGGACCCAGATGGAAGCTGCCATGACTCTACTCCGAATTCCTCGCCTCCACGGAGACCTGCCTGTACATATGCTCCAGGAGCAGCCAGAGCTGCGTCTTCATGCATGGTC
ACAAGCAGGGATCATGGTCGGGTAGCTCAGGGGACCAACTCACGATGTCTACCTGGAATGTGAGAAATAAGGCCAATCAACACAGATCAATGGCTCTCCTCCATGGCCTTGGACATGGCCAGGACCTA
CACATCATGTCCTCCTCAAAGGAGTTTTTCTGTCTTGTGGGTTCCTGCCTTCAGCCAACTCCCTACCCTTTGATGTGCTCCTTTACATCTTGAGAACACATGGGTCCCCATCCTGACTTTAGGAAGAA
AAGTGGTTCTCCTGCCTTTTTTATCTTCCCTTTTTATGGCCACCCCTCTGCCACATGGATGTTCCCAGGCTAGGGGTTCAATGGGAGCTGCCACTTCAGGCCTGTGCCACAGCTATGGCAATGACAAT
CCAAGCCACATCTTCAACCTATGCTGCAGCTTATGGCAACATCACATCCTTACTCACTGAGCAAGGCCAGGGATCAAACCCACATCCTCGCAGATACTCTGTTATGTTCTGAACCCACTGAGCCACAC
CAGGAGCTCGTCTGCTTTCTTTGTGCCCTAATGTCCTAACCCTCAAACCCAGAAACTCTTACCCCCTCCTCTCTTTGCCATGGGAACGCTCGTTCTCCTATCATCTTGCATCTCTTCCACTTCTGTGA
CTCATGGTAAATACACTGTGTCCAGAAGCCTTG

hide sequence

RefSeq Acc Id:

XM_013985184 ⟹ XP_013840638

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	33,735,809 - 33,756,077 (+)	NCBI

Sequence:

show sequence

CTTCTCTCCTCTCCACAGAGCACAGAAGTCCAGTTCTCACCAGGACACACATTTGGACAGACCA
GGCTCCTCAGGTCTCCACAATGCCCATCCCTCCTCCTTGCCTGCTGCTGATTCTAATGCTGGGACTCACAGGAGCAGCAGGTGAGGAGGGGCTGCAGGTGCTTCAGCCTGAGAGGTCCGTGTCTGTCG
CAGCTGGAGAGACGGCCACTCTGCCCTGCACTGTGACCTCCCTGATCCCCACTGGGCCCTTGAGGTGGTTCAAGGGAGCAGGACCAGCCCGGGAGTTAATCTACGATTTCAAAGGAGATCCTCGGGGC
CACTCCCCCCGAGTAACAAATGCTTCAGATGTCACGAGAAGAGACAACAAGGACTTTTCCATCCGCATCTGGAACATCACCCCAGCAGACGCCGGGACCTACTACTGTGTGAAGTTCCGGAGAGAGAG
CCCTGCGGACGTGGAGTTTAGGTCTGGGCCAGGCACTCAGCTCACTGTGAGTGCCAAGCCCTCTCGGCCCGTGGTCTCAGGCCCTGCGGCGAGGGCCACACCTGAGCAGACAGTGCGCTTCACCTGCA
AATCCCACGGCTTCTCCCCCAGAAACATCTCCCTGAAATGGTTCAAAAATGGCAATGAGCTCCCAGCCTCCCAGACCAGCGTGGAGCCCGAGGGAAACGTTTCCTACAGCATCTCCAGCACCACCGAG
GTGCTGCTGGCCCCGGGGGATGTGCACTCCCAGGTCATCTGCGAGGTGGCCCACGTCACCCTGCAAGGGGGCCCTCCTCTCCGTGGAACTGCCAACTTGTCTGAGATCATCCGAGTTCCACCCACCCT
GGAGGTTACCCAACAGCCCCCGACGGGGAGCCAGGTGAATGTCACCTGCCTGGTGAAGAAGTTCTACCCCCAGCGCCTACAGCTGACCTGGCTGGAGAACGGAACCGTGTCCCGGACAGAAACGGCCT
CGACCCTCATGGAGAACAAGGATGGGACCTTCACCCGGACCAGCTGGCTCCTGGTGAACTCATCTGCCCACAGGGAGGCCCTGCTGCTCACCTGCCAGGTGGAGCATGACGGGCAGCCGGCGGTCACC
AGAAACTATGCCCTGGAGGCTTATGTCCACCAGAAGGAACAAGACACAGGTGGAAATCATGACCAAAAGATAGCTTGTCCTCTCCTAGTAACTCTTGTCCTAGTGCTGAAGGCCCTGCAGCTGGTGGG
TGTCTCTGTCATCTTTGTCCACAAGAAGTTTTGGACCTGACCCTCCTTCCTCACCCCCTTGCTGGTGTCACTCTCCATCTCGCCTGCCTCATTCTCGCCTGAGGGGCCCAGCCCAGGAGAAGGACCCA
GATGGAAGCTGCCATGACTCTACTCCGAATTCCTCGCCTCCACGGAGACCTGCCTGTACATATGCTCCAGGAGCAGCCAGAGCTGCGTCTTCATGCATGGTCACAAGCAGGGATCATGGTCGGGTAGC
TCAGGGGACCAACTCACGATGTCTACCTGGAATGTGAGAAATAAGGCCAATCAACACAGATCAATGGCTCTCCTCCATGGCCTTGGACATGGCCAGGACCTACACATCATGTCCTCCTCAAAGGAGTT
TTTCTGTCTTGTGGGTTCCTGCCTTCAGCCAACTCCCTACCCTTTGATGTGCTCCTTTACATCTTGAGAACACATGGGTCCCCATCCTGACTTTAGGAAGAAAAGTGGTTCTCCTGCCTTTTTTATCT
TCCCTTTTTATGGCCACCCCTCTGCCACATGGATGTTCCCAGGCTAGGGGTTCAATGGGAGCTGCCACTTCAGGCCTGTGCCACAGCTATGGCAATGACAATCCAAGCCACATCTTCAACCTATGCTG
CAGCTTATGGCAACATCACATCCTTACTCACTGAGCAAGGCCAGGGATCAAACCCACATCCTCGCAGATACTCTGTTATGTTCTGAACCCACTGAGCCACACCAGGAGCTCGTCTGCTTTCTTTGTGC
CCTAATGTCCTAACCCTCAAACCCAGAAACTCTTACCCCCTCCTCTCTTTGCCATGGGAACGCTCGTTCTCCTATCATCTTGCATCTCTTCCACTTCTGTGACTCATGGTAAATACACTGTGTCCAGA
AGCCTTG

hide sequence

RefSeq Acc Id:

XM_013985185 ⟹ XP_013840639

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	33,735,809 - 33,756,077 (+)	NCBI

Sequence:

show sequence

CTTCTCTCCTCTCCACAGAGCACAGAAGTCCAGTTCTCACCAGGACACACATTTGGACAGACCA
GGCTCCTCAGGTCTCCACAATGCCCATCCCTCCTCCTTGCCTGCTGCTGATTCTAATGCTGGGACTCACAGGAGCAGCAGGTGAGGAGGGGCTGCAGGTGCTTCAGCCTGAGAGGTCCGTGTCTGTCG
CAGCTGGAGAGACGGCCACTCTGCCCTGCACTGTGACCTCCCTGATCCCCACTGGGCCCTTGAGGTGGTTCAAGGGAGCAGGACCAGCCCGGGAGTTAATCTACGATTTCAAAGGAGATCCTCGGGGC
CACTCCCCCCGAGTAACAAATGCTTCAGATGTCACGAGAAGAGACAACAAGGACTTTTCCATCCGCATCTGGAACATCACCCCAGCAGACGCCGGGACCTACTACTGTGTGAAGTTCCGGAGAGAGAG
CCCTGCGGACGTGGAGTTTAGGTCTGGGCCAGGCACTCAGCTCACTGTGAGTGCCAAGCCCTCTCGGCCCGTGGTCTCAGGCCCTGCGGCGAGGGCCACACCTGAGCAGACAGTGCGCTTCACCTGCA
AATCCCACGGCTTCTCCCCCAGAAACATCTCCCTGAAATGGTTCAAAAATGGCAATGAGCTCCCAGCCTCCCAGACCAGCGTGGAGCCCGAGGGAAACGTTTCCTACAGCATCTCCAGCACCACCGAG
GTGCTGCTGGCCCCGGGGGATGTGCACTCCCAGGTCATCTGCGAGGTGGCCCACGTCACCCTGCAAGGGGGCCCTCCTCTCCGTGGAACTGCCAACTTGTCTGAGATCATCCGAGTTCCACCCACCCT
GGAGGTTACCCAACAGCCCCCGACGGGGAGCCAGGTGAATGTCACCTGCCTGGTGAAGAAGTTCTACCCCCAGCGCCTACAGCTGACCTGGCTGGAGAACGGAACCGTGTCCCGGACAGAAACGGCCT
CGACCCTCATGGAGAACAAGGATGGGACCTTCACCCGGACCAGCTGGCTCCTGGTGAACTCATCTGCCCACAGGGAGGCCCTGCTGCTCACCTGCCAGGTGGAGCATGACGGGCAGCCGGCGGTCACC
AGAAACTATGCCCTGGAGGCTTATGTCCACCAGAAGGAACAAGACACAGACCAAAAGATAGCTTGTCCTCTCCTAGTAACTCTTGTCCTAGTGCTGAAGGCCCTGCAGCTGGTGGGTGTCTCTGTCAT
CTTTGTCCACAAGAAGTTTTGGACCTGACCCTCCTTCCTCACCCCCTTGCTGGTGTCACTCTCCATCTCGCCTGCCTCATTCTCGCCTGAGGGGCCCAGCCCAGGAGAAGGACCCAGATGGAAGCTGC
CATGACTCTACTCCGAATTCCTCGCCTCCACGGAGACCTGCCTGTACATATGCTCCAGGAGCAGCCAGAGCTGCGTCTTCATGCATGGTCACAAGCAGGGATCATGGTCGGGTAGCTCAGGGGACCAA
CTCACGATGTCTACCTGGAATGTGAGAAATAAGGCCAATCAACACAGATCAATGGCTCTCCTCCATGGCCTTGGACATGGCCAGGACCTACACATCATGTCCTCCTCAAAGGAGTTTTTCTGTCTTGT
GGGTTCCTGCCTTCAGCCAACTCCCTACCCTTTGATGTGCTCCTTTACATCTTGAGAACACATGGGTCCCCATCCTGACTTTAGGAAGAAAAGTGGTTCTCCTGCCTTTTTTATCTTCCCTTTTTATG
GCCACCCCTCTGCCACATGGATGTTCCCAGGCTAGGGGTTCAATGGGAGCTGCCACTTCAGGCCTGTGCCACAGCTATGGCAATGACAATCCAAGCCACATCTTCAACCTATGCTGCAGCTTATGGCA
ACATCACATCCTTACTCACTGAGCAAGGCCAGGGATCAAACCCACATCCTCGCAGATACTCTGTTATGTTCTGAACCCACTGAGCCACACCAGGAGCTCGTCTGCTTTCTTTGTGCCCTAATGTCCTA
ACCCTCAAACCCAGAAACTCTTACCCCCTCCTCTCTTTGCCATGGGAACGCTCGTTCTCCTATCATCTTGCATCTCTTCCACTTCTGTGACTCATGGTAAATACACTGTGTCCAGAAGCCTTG

hide sequence

RefSeq Acc Id:

XM_021077522 ⟹ XP_020933181

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	33,735,808 - 33,751,681 (+)	NCBI

Sequence:

show sequence

GCTTCTCTCCTCTCCACAGAGCACAGAAGTCCAGTTCTCACCAGGACACACATTTGGACAGACCAGGCTCCTCAGGTCTCCACAATGCCCATCCCTCCTCCTTGCCTGCTGCTGATTCTAATGCTGGG
ACTCACAGGAGCAGCAGGTGAGGAGGGGCTGCAGGTGCTTCAGCCTGAGAGGTCCGTGTCTGTCGCAGCTGGAGAGACGGCCACTCTGCCCTGCACTGTGACCTCCCTGATCCCCACTGGGCCCTTGA
GGTGGTTCAAGGGAGCAGGACCAGCCCGGGAGTTAATCTACGATTTCAAAGGAGATCCTCGGGGCCACTCCCCCCGAGTAACAAATGCTTCAGATGTCACGAGAAGAGACAACAAGGACTTTTCCATC
CGCATCTGGAACATCACCCCAGCAGACGCCGGGACCTACTACTGTGTGAAGTTCCGGAGAGAGAGCCCTGCGGACGTGGAGTTTAGGTCTGGGCCAGGCACTCAGCTCACTGTGAGTGCCAAGCCCTC
TCGGCCCGTGGTCTCAGGCCCTGCGGCGAGGGCCACACCTGAGCAGACAGTGCGCTTCACCTGCAAATCCCACGGCTTCTCCCCCAGAAACATCTCCCTGAAATGGTTCAAAAATGGCAATGAGCTCC
CAGCCTCCCAGACCAGCGTGGAGCCCGAGGGAAACGTTTCCTACAGCATCTCCAGCACCACCGAGGTGCTGCTGGCCCCGGGGGATGTGCACTCCCAGGTCATCTGCGAGGTGGCCCACGTCACCCTG
CAAGGGGGCCCTCCTCTCCGTGGAACTGCCAACTTGTCTGAGATCATCCGAGTTCCACCCACCCTGGAGGTTACCCAACAGCCCCCGACGGGGAGCCAGGTGAATGTCACCTGCCTGGTGAAGAAGTT
CTACCCCCAGCGCCTACAGCTGACCTGGCTGGAGAACGGAACCGTGTCCCGGACAGAAACGGCCTCGACCCTCATGGAGAACAAGGATGGGACCTTCACCCGGACCAGCTGGCTCCTGGTGAACTCAT
CTGCCCACAGGGAGGCCCTGCTGCTCACCTGCCAGGTGGAGCATGACGGGCAGCCGGCGGTCACCAGAAACTATGCCCTGGAGGCTTATGTCCACCAGAAGGAACAAGACACAGGTGGAAATCATGAC
GTCTGTACCTACTGCTCTGTGAACTTCTGGAAGGGGCGCTCTGAAGACTGTGAAGTTGGAGTCTGGGCCAGGCACTGGGGTGACCGAGAGGGGTCCATGTCCAGACCTGCTTTGTCGCTGATTTGTGA
CAGTGGAGCAGCAGGGATCCCAGGTGCTCACTGCACATTTACTAAACACAAATCTCTCTGCAGTGGTGATCTCCTTTCCTGCTTCCACCACCCTGAGGGTTTGGACTTTACAGAAGGGACTCGGGAAG
CAGTGGGCCTGATGGGGTGGAAGATGGCTTGCTTTTAGTCCAGGTGATTGGGCTGAACGCAACAAGGTAAAGCTGCCTCTCTGAGGACAGAAAACACCAGCCTGCACAATGGGTAGGTACTATGCAGA
GGCAGGTTCCCCTGAGCCGGGCTTCTGCCAAGGTCACGGGGGGGATCCCCTTTCTATGACAAAAACGTGTCTTCTCACATAACATCAGGAGAAGGTCAAGTGGATTTCCAGGAATCTTTACTCCAGGG
GAACTTTCAAAGGCCCAGAGTCCTTCCCAGGGGCCCTTTGCTTGTCCTCATCTGTGGAGTCAACACTAGTTCATCCAGAGTCTCTGTCCCTCTGCCTGCTGGAGGAAGAAAGGGAGGAAGGGGAGGAG
CACCCACTTCCCTTACACCAGAGATACAGAGAAGTTGCATCATTGTGTCCACTCATGACTTAGTCCTGTGTGCACATGCCCAGGGCCAAAGAGCCCACAGTTGCGTGGTCCTATGATTACGAACATGG
ATCATCTCAAAACCATTACACACTTGGTAAAATAAACAATAATTCCCTTATA

hide sequence

RefSeq Acc Id:

XM_021077523 ⟹ XP_020933182

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	17	33,735,808 - 33,756,077 (+)	NCBI

Sequence:

show sequence

GCTTCTCTCCTCTCCACAGAGCACAGAAGTCCAGTTCTCACCAGGACACACATTTGGACAGACC
AGGCTCCTCAGGTCTCCACAATGCCCATCCCTCCTCCTTGCCTGCTGCTGATTCTAATGCTGGGACTCACAGGAGCAGCAGGTGAGGAGGGGCTGCAGGTGCTTCAGCCTGAGAGGTCCGTGTCTGTC
GCAGCTGGAGAGACGGCCACTCTGCCCTGCACTGTGACCTCCCTGATCCCCACTGGGCCCTTGAGGTGGTTCAAGGGAGCAGGACCAGCCCGGGAGTTAATCTACGATTTCAAAGGAGATCCTCGGGG
CCACTCCCCCCGAGTAACAAATGCTTCAGATGTCACGAGAAGAGACAACAAGGACTTTTCCATCCGCATCTGGAACATCACCCCAGCAGACGCCGGGACCTACTACTGTGTGAAGTTCCGGAGAGAGA
GCCCTGCGGACGTGGAGTTTAGGTCTGGGCCAGGCACTCAGCTCACTGTGAGTGCCAAGCCCTCTCGGCCCGTGGTCTCAGGCCCTGCGGCGAGGGCCACACCTGAGCAGACAGTGCGCTTCACCTGC
AAATCCCACGGCTTCTCCCCCAGAAACATCTCCCTGAAATGGTTCAAAAATGGCAATGAGCTCCCAGCCTCCCAGACCAGCGTGGAGCCCGAGGGAAACGTTTCCTACAGCATCTCCAGCACCACCGA
GGTGCTGCTGGCCCCGGGGGATGTGCACTCCCAGGTCATCTGCGAGGTGGCCCACGTCACCCTGCAAGGGGGCCCTCCTCTCCGTGGAACTGCCAACTTGTCTGAGATCATCCGAGTTCCACCCACCC
TGGAGGTTACCCAACAGCCCCCGACGGGGAGCCAGGTGAATGTCACCTGCCTGGTGAAGAAGTTCTACCCCCAGCGCCTACAGCTGACCTGGCTGGAGAACGGAACCGTGTCCCGGACAGAAACGGCC
TCGACCCTCATGGAGAACAAGGATGGGACCTTCACCCGGACCAGCTGGCTCCTGGTGAACTCATCTGCCCACAGGGAGGCCCTGCTGCTCACCTGCCAGGTGGAGCATGACGGGCAGCCGGCGGTCAC
CAGAAACTATGCCCTGGAGGCTTATGTCCACCAGAAGGAACAAGACACAGACGTCTGTACCTACTGCTCTGTGAACTTCTGGAAGGGGCGCTCTGAAGACTGTGAAGTTGGAGTCTGGGCCAGGCACT
GGGGTGACCGAGAGGGGTCCATGTCCAGACCTGCTTTGTCGCTGATTTGTGACAGTGGAGCAGCAGGGATCCCAGACCAAAAGATAGCTTGTCCTCTCCTAGTAACTCTTGTCCTAGTGCTGAAGGCC
CTGCAGCTGGTGGGTGTCTCTGTCATCTTTGTCCACAAGAAGTTTTGGACCTGACCCTCCTTCCTCACCCCCTTGCTGGTGTCACTCTCCATCTCGCCTGCCTCATTCTCGCCTGAGGGGCCCAGCCC
AGGAGAAGGACCCAGATGGAAGCTGCCATGACTCTACTCCGAATTCCTCGCCTCCACGGAGACCTGCCTGTACATATGCTCCAGGAGCAGCCAGAGCTGCGTCTTCATGCATGGTCACAAGCAGGGAT
CATGGTCGGGTAGCTCAGGGGACCAACTCACGATGTCTACCTGGAATGTGAGAAATAAGGCCAATCAACACAGATCAATGGCTCTCCTCCATGGCCTTGGACATGGCCAGGACCTACACATCATGTCC
TCCTCAAAGGAGTTTTTCTGTCTTGTGGGTTCCTGCCTTCAGCCAACTCCCTACCCTTTGATGTGCTCCTTTACATCTTGAGAACACATGGGTCCCCATCCTGACTTTAGGAAGAAAAGTGGTTCTCC
TGCCTTTTTTATCTTCCCTTTTTATGGCCACCCCTCTGCCACATGGATGTTCCCAGGCTAGGGGTTCAATGGGAGCTGCCACTTCAGGCCTGTGCCACAGCTATGGCAATGACAATCCAAGCCACATC
TTCAACCTATGCTGCAGCTTATGGCAACATCACATCCTTACTCACTGAGCAAGGCCAGGGATCAAACCCACATCCTCGCAGATACTCTGTTATGTTCTGAACCCACTGAGCCACACCAGGAGCTCGTC
TGCTTTCTTTGTGCCCTAATGTCCTAACCCTCAAACCCAGAAACTCTTACCCCCTCCTCTCTTTGCCATGGGAACGCTCGTTCTCCTATCATCTTGCATCTCTTCCACTTCTGTGACTCATGGTAAAT
ACACTGTGTCCAGAAGCCTTG

hide sequence


Protein RefSeqs	XP_013840636	(Get FASTA)	NCBI Sequence Viewer
	XP_013840637	(Get FASTA)	NCBI Sequence Viewer
	XP_013840638	(Get FASTA)	NCBI Sequence Viewer
	XP_013840639	(Get FASTA)	NCBI Sequence Viewer
	XP_020933181	(Get FASTA)	NCBI Sequence Viewer
	XP_020933182	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000028369
	ENSSSCP00000028369.4
	ENSSSCP00030019296.1
	ENSSSCP00035017006.1
	ENSSSCP00045042299.1
	ENSSSCP00045042350.1
	ENSSSCP00045042388.1
	ENSSSCP00045042436.1
	ENSSSCP00045042477.1
	ENSSSCP00055015649.1
	ENSSSCP00055015692.1
	ENSSSCP00055015711.1
	ENSSSCP00070002428.1
GenBank Protein	JAG69182	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013840637 ⟸ XM_013985183
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D1J7F4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPIPPPCLLLILMLGLTGAAGEEGLQVLQPERSVSVAAGETATLPCTVTSLIPTGPLRWFKGAGPARELIYDFKGDPRGHSPRVTNASDVTRRDNKDFSIRIWNITPADAGTYYCVKFRRESPADVEF RSGPGTQLTVSAKPSRPVVSGPAARATPEQTVRFTCKSHGFSPRNISLKWFKNGNELPASQTSVEPEGNVSYSISSTTEVLLAPGDVHSQVICEVAHVTLQGGPPLRGTANLSEIIRVPPTLEVTQQP PTGSQVNVTCLVKKFYPQRLQLTWLENGTVSRTETASTLMENKDGTFTRTSWLLVNSSAHREALLLTCQVEHDGQPAVTRNYALEAYVHQKEQDTGGNHDVCTYCSVNFWKGRSEDCEVGVWARHWGD REGSMSRPALSLICDSGAAGIPDQKIACPLLVTLVLVLKALQLVGVSVIFVHKKFWT hide sequence

RefSeq Acc Id:	XP_020933182 ⟸ XM_021077523
- Peptide Label:	isoform X4
- UniProtKB:	I3L932 (UniProtKB/TrEMBL), A0A8D1J7F4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPIPPPCLLLILMLGLTGAAGEEGLQVLQPERSVSVAAGETATLPCTVTSLIPTGPLRWFKGAG PARELIYDFKGDPRGHSPRVTNASDVTRRDNKDFSIRIWNITPADAGTYYCVKFRRESPADVEFRSGPGTQLTVSAKPSRPVVSGPAARATPEQTVRFTCKSHGFSPRNISLKWFKNGNELPASQTSV EPEGNVSYSISSTTEVLLAPGDVHSQVICEVAHVTLQGGPPLRGTANLSEIIRVPPTLEVTQQPPTGSQVNVTCLVKKFYPQRLQLTWLENGTVSRTETASTLMENKDGTFTRTSWLLVNSSAHREAL LLTCQVEHDGQPAVTRNYALEAYVHQKEQDTDVCTYCSVNFWKGRSEDCEVGVWARHWGDREGSMSRPALSLICDSGAAGIPDQKIACPLLVTLVLVLKALQLVGVSVIFVHKKFWT hide sequence

RefSeq Acc Id:	XP_020933181 ⟸ XM_021077522
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1QDA1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPIPPPCLLLILMLGLTGAAGEEGLQVLQPERSVSVAAGETATLPCTVTSLIPTGPLRWFKGAGPARELIYDFKGDPRGHSPRVTNASDVTRRDNKDFSIRIWNITPADAGTYYCVKFRRESPADVEF RSGPGTQLTVSAKPSRPVVSGPAARATPEQTVRFTCKSHGFSPRNISLKWFKNGNELPASQTSVEPEGNVSYSISSTTEVLLAPGDVHSQVICEVAHVTLQGGPPLRGTANLSEIIRVPPTLEVTQQP PTGSQVNVTCLVKKFYPQRLQLTWLENGTVSRTETASTLMENKDGTFTRTSWLLVNSSAHREALLLTCQVEHDGQPAVTRNYALEAYVHQKEQDTGGNHDVCTYCSVNFWKGRSEDCEVGVWARHWGD REGSMSRPALSLICDSGAAGIPGAHCTFTKHKSLCSGDLLSCFHHPEGLDFTEGTREAVGLMGWKMACF hide sequence

RefSeq Acc Id:	XP_013840636 ⟸ XM_013985182
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1QDA1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPIPPPCLLLILMLGLTGAAGEEGLQVLQPERSVSVAAGETATLPCTVTSLIPTGPLRWFKGAGPARELIYDFKGDPRGHSPRVTNASDVTRRDNKDFSIRIWNITPADAGTYYCVKFRRESPADVEF RSGPGTQLTVSAKPSRPVVSGPAARATPEQTVRFTCKSHGFSPRNISLKWFKNGNELPASQTSVEPEGNVSYSISSTTEVLLAPGDVHSQVICEVAHVTLQGGPPLRGTANLSEIIRVPPTLEVTQQP PTGSQVNVTCLVKKFYPQRLQLTWLENGTVSRTETASTLMENKDGTFTRTSWLLVNSSAHREALLLTCQVEHDGQPAVTRNYALEAYVHQKEQDTDVCTYCSVNFWKGRSEDCEVGVWARHWGDREGS MSRPALSLICDSGAAGIPGAHCTFTKHKSLCSGDLLSCFHHPEGLDFTEGTREAVGLMGWKMACF hide sequence

RefSeq Acc Id:	XP_013840638 ⟸ XM_013985184
- Peptide Label:	isoform X5
- UniProtKB:	A0A8D0ZHY9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPIPPPCLLLILMLGLTGAAGEEGLQVLQPERSVSVAAGETATLPCTVTSLIPTGPLRWFKGAGPARELIYDFKGDPRGHSPRVTNASDVTRRDNKDFSIRIWNITPADAGTYYCVKFRRESPADVEF RSGPGTQLTVSAKPSRPVVSGPAARATPEQTVRFTCKSHGFSPRNISLKWFKNGNELPASQTSVEPEGNVSYSISSTTEVLLAPGDVHSQVICEVAHVTLQGGPPLRGTANLSEIIRVPPTLEVTQQP PTGSQVNVTCLVKKFYPQRLQLTWLENGTVSRTETASTLMENKDGTFTRTSWLLVNSSAHREALLLTCQVEHDGQPAVTRNYALEAYVHQKEQDTGGNHDQKIACPLLVTLVLVLKALQLVGVSVIFV HKKFWT hide sequence

Protein Domains

Ig-like

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000027665	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00030030592	UniProtKB/TrEMBL
	ENSSSCG00035032100	UniProtKB/TrEMBL
	ENSSSCG00045035086	UniProtKB/TrEMBL
	ENSSSCG00055010148	UniProtKB/TrEMBL
	ENSSSCG00070001585	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000033347	ENTREZGENE
	ENSSSCT00000033347.4	UniProtKB/TrEMBL
	ENSSSCT00030042457.1	UniProtKB/TrEMBL
	ENSSSCT00035042522.1	UniProtKB/TrEMBL
	ENSSSCT00045060234.1	UniProtKB/TrEMBL
	ENSSSCT00045060298.1	UniProtKB/TrEMBL
	ENSSSCT00045060353.1	UniProtKB/TrEMBL
	ENSSSCT00045060429.1	UniProtKB/TrEMBL
	ENSSSCT00045060492.1	UniProtKB/TrEMBL
	ENSSSCT00055019831.1	UniProtKB/TrEMBL
	ENSSSCT00055019885.1	UniProtKB/TrEMBL
	ENSSSCT00055019906.1	UniProtKB/TrEMBL
	ENSSSCT00070002952.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ig-like_CS_Receptor	UniProtKB/TrEMBL
	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_C1-set	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_V-set	UniProtKB/TrEMBL
NCBI Gene	LOC102161654	ENTREZGENE
PANTHER	SIGNAL-REGULATORY PROTEIN BETA	UniProtKB/TrEMBL
Pfam	C1-set	UniProtKB/TrEMBL
	V-set	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
SMART	IGc1	UniProtKB/TrEMBL
	IGv	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A0B8RZ60	ENTREZGENE
	A0A4X1SJ44_PIG	UniProtKB/TrEMBL
	A0A8D0WGA2_PIG	UniProtKB/TrEMBL
	A0A8D0ZHY9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1IZT0_PIG	UniProtKB/TrEMBL
	A0A8D1IZX3_PIG	UniProtKB/TrEMBL
	A0A8D1J5N9_PIG	UniProtKB/TrEMBL
	A0A8D1J7F4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1L8I5_PIG	UniProtKB/TrEMBL
	A0A8D1Q5K5_PIG	UniProtKB/TrEMBL
	A0A8D1QD47_PIG	UniProtKB/TrEMBL
	A0A8D1QDA1	ENTREZGENE, UniProtKB/TrEMBL
	I3L932	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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