RGD:8637210 Rat Genome Database

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Variant: RGD:8637210 -  Homo sapiens

RGD ID: 8637210
ClinVar ID: CV92436
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: SIRPB1  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 20 1,585,446
GRCh38 20 1,604,800
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001135844.2:c.693C>T
NM_006065.3:c.76+15069C>T
NM_001083910.2:c.76+15069C>T
NC_000020.11:g.1604800G>A
More... 		intron|synonymous variant|intron variant not provided Malignant melanoma, somatic

Variant Details
Variant Transcripts
Gene Symbol:SIRPB1
Accession:NM_001329157
Location:EXON
Amino Acid Prediction: H to H (synonymous)
Amino Acid Position: 231
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYN
QKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARAT
PQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR
GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYNWMSWLLVNVS
AHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA*

Gene Symbol:SIRPB1
Accession:NM_001135844
Location:EXON
Amino Acid Prediction: H to H (synonymous)
Amino Acid Position: 231
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYN
QKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARAT
PQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR
GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYNWMSWLLVNVS
AHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA*

Gene Symbol:SIRPB1
Accession:XR_007067441
Location:EXON;NON-CODING

Gene Symbol:SIRPB1
Accession:NM_001083910
Location:INTRON

Gene Symbol:SIRPB1
Accession:XM_005260641
Location:INTRON

Gene Symbol:SIRPB1
Accession:NM_001330639
Location:INTRON

Gene Symbol:SIRPB1
Accession:NM_006065
Location:INTRON

Variant Samples