PIGN (phosphatidylinositol glycan anchor biosynthesis class N) - Rat Genome Database

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Gene: PIGN (phosphatidylinositol glycan anchor biosynthesis class N) Homo sapiens
Analyze
Symbol: PIGN
Name: phosphatidylinositol glycan anchor biosynthesis class N
RGD ID: 1322753
HGNC Page HGNC:8967
Description: Predicted to enable mannose-ethanolamine phosphotransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Located in cytosol and plasma membrane. Implicated in multiple congenital anomalies-hypotonia-seizures syndrome 1.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: GPI ethanolamine phosphate transferase 1; LOC105372158; MCAHS; MCAHS1; MCD4; MCD4 homolog; MDC4; MGC26427; phosphatidylinositol glycan anchor biosynthesis, class N; phosphatidylinositol glycan, class n; phosphatidylinositol-glycan biosynthesis class N protein; PIG-N; uncharacterized LOC105372158
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381862,017,615 - 62,187,056 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1861,905,255 - 62,187,118 (-)EnsemblGRCh38hg38GRCh38
GRCh371859,708,397 - 59,854,289 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361857,862,437 - 58,005,269 (-)NCBINCBI36Build 36hg18NCBI36
Build 341857,862,439 - 58,005,206NCBI
Celera1856,430,705 - 56,573,517 (-)NCBICelera
Cytogenetic Map18q21.33NCBI
HuRef1856,421,823 - 56,565,179 (-)NCBIHuRef
CHM1_11859,707,055 - 59,849,802 (-)NCBICHM1_1
T2T-CHM13v2.01862,220,799 - 62,389,993 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 101 rows
Object Symbol
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Original Reference(s)
PIGNHumanchromosome 18q deletion syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Monosomy 18q and deletion 18qClinVarPMID:25741868
PIGNHumanchromosome 18q deletion syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Monosomy 18q and deletion 18qClinVarPMID:31690835
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868
PIGNHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
PIGNHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
PIGNHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:16199547 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:24033266 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:24253414 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:26467025 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:26467025 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:16199547 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:24253414 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 more ...
PIGNHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:26467025 and PMID:28492532
1 to 20 of 101 rows
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Original Reference(s)
PIGNHumanAnimal Disease Models  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:27602772
PIGNHumanlung adenocarcinoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:27602772
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Original Reference(s)
PIGNHumanholoprosencephaly  ISSPign (Mus musculus)13592920 MouseDO 
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Original Reference(s)
PIGNHumanchoreatic disease  ISOPIGN (Canis lupus familiaris)9068941Dyskinesia more ...OMIAPMID:15474685 more ...
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Original Reference(s)
PIGNHumanmultiple congenital anomalies-hypotonia-seizures syndrome 1  IAGP 7240710 OMIM 

1 to 20 of 53 rows

  
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Original Reference(s)
PIGNHuman1,2-dimethylhydrazine decreases expressionISOPign (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of PIGN mRNACTDPMID:22206623
PIGNHuman17beta-estradiol increases expressionISOPign (Rattus norvegicus)6480464Estradiol results in increased expression of PIGN mRNACTDPMID:32145629
PIGNHuman2,2',5,5'-tetrachlorobiphenyl decreases expressionEXP 64804642 more ...CTDPMID:36804509
PIGNHuman2,3,7,8-tetrachlorodibenzodioxine affects expressionISOPign (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of PIGN mRNACTDPMID:21570461
PIGNHuman2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPign (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of PIGN mRNACTDPMID:33387578
PIGNHuman2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOPign (Rattus norvegicus)64804642 more ...CTDPMID:32109520
PIGNHuman2-hydroxypropanoic acid decreases expressionEXP 6480464Lactic Acid results in decreased expression of PIGN mRNACTDPMID:30851411
PIGNHuman2-methylcholine affects expressionEXP 6480464beta-methylcholine affects the expression of PIGN mRNACTDPMID:21179406
PIGNHuman4,4'-diaminodiphenylmethane decreases expressionISOPign (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of PIGN mRNACTDPMID:18648102
PIGNHuman4,4'-sulfonyldiphenol decreases expressionISOPign (Mus musculus)6480464bisphenol S results in decreased expression of PIGN mRNACTDPMID:39298647
PIGNHumanacetamide decreases expressionISOPign (Rattus norvegicus)6480464acetamide results in decreased expression of PIGN mRNACTDPMID:31881176
PIGNHumanacrolein multiple interactionsEXP 6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of and results in increased oxidation of PIGN mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of and results in increased oxidation of PIGN mRNACTDPMID:32699268
PIGNHumanacrylamide increases expressionISOPign (Rattus norvegicus)6480464Acrylamide results in increased expression of PIGN mRNACTDPMID:28959563
PIGNHumanaflatoxin B1 increases expressionISOPign (Mus musculus)6480464Aflatoxin B1 results in increased expression of PIGN mRNACTDPMID:19770486
PIGNHumanalpha-pinene multiple interactionsEXP 6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of and results in increased oxidation of PIGN mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of and results in increased oxidation of PIGN mRNACTDPMID:32699268
PIGNHumanaristolochic acid A decreases expressionEXP 6480464aristolochic acid I results in decreased expression of PIGN mRNACTDPMID:33212167
PIGNHumanbisphenol A decreases expressionISOPign (Rattus norvegicus)6480464bisphenol A results in decreased expression of PIGN mRNACTDPMID:25181051 more ...
PIGNHumanbisphenol A increases expressionISOPign (Mus musculus)6480464bisphenol A results in increased expression of PIGN mRNACTDPMID:35598803
PIGNHumanbisphenol A decreases expressionISOPign (Mus musculus)6480464bisphenol A results in decreased expression of PIGN mRNACTDPMID:37894381
PIGNHumanbisphenol A increases expressionISOPign (Rattus norvegicus)6480464bisphenol A results in increased expression of PIGN mRNACTDPMID:32145629

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Biological Process

  
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Original Reference(s)
PIGNHumanGPI anchor biosynthetic process involved_inTAS 150520179 ReactomeReactome:R-HSA-162710
PIGNHumanGPI anchor biosynthetic process involved_inISSUniProtKB:Q9R1S3150520179 UniProtGO_REF:0000024
PIGNHumanGPI anchor biosynthetic process involved_inIBAPANTHER:PTN000262246 more ...150520179 GO_CentralGO_REF:0000033
PIGNHumanGPI anchor biosynthetic process involved_inIEAUniPathway:UPA00196150520179 UniProtGO_REF:0000041
PIGNHumanGPI anchor biosynthetic process involved_inIEAUniProtKB-KW:KW-0337150520179 UniProtGO_REF:0000043
PIGNHumanGPI anchor biosynthetic process involved_inIEAInterPro:IPR007070 more ...150520179 InterProGO_REF:0000002

Cellular Component
1 to 11 of 11 rows

  
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Original Reference(s)
PIGNHumancytosol located_inIDA 150520179 HPAGO_REF:0000052
PIGNHumanendoplasmic reticulum located_inIEAUniProtKB-KW:KW-0256150520179 UniProtGO_REF:0000043
PIGNHumanendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-0097150520179 UniProtGO_REF:0000044
PIGNHumanendoplasmic reticulum membrane is_active_inIBAPANTHER:PTN000262246 more ...150520179 GO_CentralGO_REF:0000033
PIGNHumanendoplasmic reticulum membrane located_inIEAUniRule:UR001454753150520179 UniProtGO_REF:0000104
PIGNHumanendoplasmic reticulum membrane located_inIEAInterPro:IPR007070 and InterPro:IPR017852150520179 InterProGO_REF:0000002
PIGNHumanendoplasmic reticulum membrane located_inTAS 150520179 ReactomeReactome:R-HSA-162798
PIGNHumanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
PIGNHumanmembrane located_inIEAInterPro:IPR037671150520179 InterProGO_REF:0000002
PIGNHumanmembrane located_inHDA 150520179 PMID:19946888UniProtPMID:19946888
PIGNHumanplasma membrane located_inIDA 150520179 HPAGO_REF:0000052
1 to 11 of 11 rows

Molecular Function

  
Object Symbol
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Original Reference(s)
PIGNHumanmannose-ethanolamine phosphotransferase activity enablesISSUniProtKB:Q9R1S3150520179 UniProtGO_REF:0000024
PIGNHumanmannose-ethanolamine phosphotransferase activity enablesIBAPANTHER:PTN000262246 and SGD:S000001648150520179 GO_CentralGO_REF:0000033
PIGNHumanmannose-ethanolamine phosphotransferase activity enablesTAS 150520179 ReactomeReactome:R-HSA-162798
PIGNHumanmannose-ethanolamine phosphotransferase activity enablesIEAInterPro:IPR007070 and InterPro:IPR037671150520179 InterProGO_REF:0000002
PIGNHumanmannose-ethanolamine phosphotransferase activity enablesIEAUniRule:UR001454753150520179 UniProtGO_REF:0000104
PIGNHumantransferase activity enablesIEAUniProtKB-KW:KW-0808150520179 UniProtGO_REF:0000043
PIGNHumantransferase activity enablesIEAInterPro:IPR017852150520179 InterProGO_REF:0000002

Imported Annotations - KEGG (archival)

Object Symbol
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Reference
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Original Reference(s)
PIGNHumanglycosylphosphatidylinositol anchor biosynthetic pathway  IEA 6907045 KEGGhsa:00563
1 to 20 of 194 rows
Object Symbol
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Original Reference(s)
PIGNHumanAbnormal aortic arch morphology  IAGP 8699517 HPOORPHA:2059
PIGNHumanAbnormal aortic morphology  IAGP 8699517 HPOORPHA:2059
PIGNHumanAbnormal cardiac septum morphology  IAGP 8699517 HPOORPHA:2059
PIGNHumanAbnormal ilium morphology  IAGP 8699517 HPOMIM:614080
PIGNHumanAbnormal posterior cranial fossa morphology  IAGP 8699517 HPOORPHA:280633
PIGNHumanAbnormal renal collecting system morphology  IAGP 8699517 HPOORPHA:280633
PIGNHumanAbsent speech  IAGP 8699517 HPOMIM:614080
PIGNHumanAganglionic megacolon  IAGP 8699517 HPOORPHA:2059
PIGNHumanAgenesis of corpus callosum  IAGP 8699517 HPOORPHA:2059
PIGNHumanAmblyopia  IAGP 8699517 HPOORPHA:280633
PIGNHumanAmblyopia  IAGP 8699517 HPOMIM:614080
PIGNHumanAnal atresia  IAGP 8699517 HPOORPHA:2059
PIGNHumanAnal atresia  IAGP 8699517 HPOMIM:614080
PIGNHumanAnal atresia  IAGP 8699517 HPOORPHA:280633
PIGNHumanAnal stenosis  IAGP 8699517 HPOMIM:614080
PIGNHumanAnal stenosis  IAGP 8699517 HPOORPHA:280633
PIGNHumanAnteverted nares  IAGP 8699517 HPOMIM:614080
PIGNHumanAnteverted nares  IAGP 8699517 HPOORPHA:280633
PIGNHumanAnteverted nares  IAGP 8699517 HPOORPHA:2059
PIGNHumanAortic root aneurysm  IAGP 8699517 HPOORPHA:280633
1 to 20 of 194 rows
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Original Reference(s)
PIGNHumanAbnormal brain morphology  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Abnormality of brain morphologyClinVarPMID:25741868 more ...
PIGNHumanNeurodevelopmental delay  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental delayClinVarPMID:25741868
PIGNHumanSchizophrenia  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVar 

#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
PMID:8889548   PMID:10069808   PMID:10574991   PMID:11102867   PMID:12477932   PMID:15489334   PMID:16341674   PMID:16344560   PMID:19322201   PMID:19690890   PMID:19946888   PMID:20301533  
PMID:20301632   PMID:20379614   PMID:21493957   PMID:21873635   PMID:21903422   PMID:21988832   PMID:22658674   PMID:22876578   PMID:24104479   PMID:24253414   PMID:26186194   PMID:26364997  
PMID:26394714   PMID:27038415   PMID:27980068   PMID:28187452   PMID:28327575   PMID:28514442   PMID:29330547   PMID:33961781   PMID:34051595   PMID:34079125   PMID:34561473   PMID:35271311  
PMID:35337019   PMID:35439318   PMID:35696571   PMID:36215168   PMID:36322149   PMID:36363484   PMID:36526897  



PIGN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381862,017,615 - 62,187,056 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1861,905,255 - 62,187,118 (-)EnsemblGRCh38hg38GRCh38
GRCh371859,708,397 - 59,854,289 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361857,862,437 - 58,005,269 (-)NCBINCBI36Build 36hg18NCBI36
Build 341857,862,439 - 58,005,206NCBI
Celera1856,430,705 - 56,573,517 (-)NCBICelera
Cytogenetic Map18q21.33NCBI
HuRef1856,421,823 - 56,565,179 (-)NCBIHuRef
CHM1_11859,707,055 - 59,849,802 (-)NCBICHM1_1
T2T-CHM13v2.01862,220,799 - 62,389,993 (-)NCBIT2T-CHM13v2.0
Pign
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391105,446,147 - 105,591,466 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1105,446,147 - 105,591,402 (-)EnsemblGRCm39 Ensembl
GRCm381105,518,421 - 105,663,741 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1105,518,422 - 105,663,677 (-)EnsemblGRCm38mm10GRCm38
MGSCv371107,417,716 - 107,560,253 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361107,348,686 - 107,491,209 (-)NCBIMGSCv36mm8
Celera1108,376,436 - 108,513,016 (-)NCBICelera
Cytogenetic Map1E2.1NCBI
cM Map149.63NCBI
Pign
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81322,173,670 - 22,321,344 (-)NCBIGRCr8
mRatBN7.21321,659,092 - 21,812,932 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1321,662,455 - 21,806,790 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1321,998,808 - 22,126,716 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01323,283,603 - 23,411,510 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01321,967,490 - 22,095,400 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01325,510,593 - 25,662,943 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1325,513,892 - 25,652,473 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01330,779,066 - 30,820,235 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01330,676,676 - 30,740,322 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41311,668,749 - 11,833,940 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11311,442,630 - 11,828,636 (-)NCBI
Celera1321,552,506 - 21,677,358 (-)NCBICelera
Cytogenetic Map13p11NCBI
Pign
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540245,983,826 - 46,114,752 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540245,979,577 - 46,114,634 (-)NCBIChiLan1.0ChiLan1.0
PIGN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21779,566,515 - 79,708,287 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11865,259,126 - 65,400,898 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01855,415,182 - 55,557,092 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11858,733,740 - 58,875,183 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1858,733,740 - 58,875,183 (-)Ensemblpanpan1.1panPan2
PIGN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1114,684,026 - 14,791,221 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl114,685,694 - 14,805,691 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha115,651,440 - 15,758,632 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0114,544,736 - 14,652,948 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl114,544,755 - 14,652,948 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1114,580,565 - 14,688,156 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0114,513,807 - 14,621,155 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0114,760,723 - 14,868,433 (+)NCBIUU_Cfam_GSD_1.0
Pign
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494427,882,060 - 27,991,301 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364973,124,557 - 3,234,061 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364973,121,184 - 3,230,912 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIGN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1159,317,734 - 159,417,327 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11159,317,734 - 159,417,335 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21176,781,531 - 176,879,102 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PIGN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11817,589,582 - 17,725,823 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1817,589,631 - 17,725,823 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660607,936,049 - 8,099,945 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pign
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247927,712,113 - 7,916,160 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247927,713,042 - 7,916,177 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in PIGN
1209 total Variants

1 to 10 of 1419 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_176787.5(PIGN):c.1258del (p.Leu420fs) deletion Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV000549586] Chr18:62113310 [GRCh38]
Chr18:59780543 [GRCh37]
Chr18:18q21.33
pathogenic|likely pathogenic
NM_176787.5(PIGN):c.787C>A (p.His263Asn) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV001061678]|not provided [RCV000726748]|not specified [RCV003317254] Chr18:62146989 [GRCh38]
Chr18:59814222 [GRCh37]
Chr18:18q21.33
conflicting interpretations of pathogenicity|uncertain significance
NM_176787.5(PIGN):c.2590G>A (p.Val864Ile) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV000558792] Chr18:62074808 [GRCh38]
Chr18:59742041 [GRCh37]
Chr18:18q21.33
uncertain significance
NM_176787.5(PIGN):c.2672G>A (p.Ser891Asn) single nucleotide variant not provided [RCV000520775] Chr18:62072673 [GRCh38]
Chr18:59739906 [GRCh37]
Chr18:18q21.33
uncertain significance
NM_176787.5(PIGN):c.2098C>T (p.Leu700=) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV000544679] Chr18:62095930 [GRCh38]
Chr18:59763163 [GRCh37]
Chr18:18q21.33
likely benign
NM_176787.5(PIGN):c.661C>T (p.Arg221Ter) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV001389985]|not provided [RCV000521215] Chr18:62148227 [GRCh38]
Chr18:59815460 [GRCh37]
Chr18:18q21.33
pathogenic
NM_176787.5(PIGN):c.2679C>G (p.Ser893Arg) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV000706539]|not provided [RCV000519462] Chr18:62045973 [GRCh38]
Chr18:59713206 [GRCh37]
Chr18:18q21.33
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance
NM_176787.5(PIGN):c.1387A>G (p.Ile463Val) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV000549796]|not provided [RCV004722912] Chr18:62113181 [GRCh38]
Chr18:59780414 [GRCh37]
Chr18:18q21.33
uncertain significance
NM_176787.5(PIGN):c.963G>A (p.Gln321=) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV000087306]|not provided [RCV001548501] Chr18:62143306 [GRCh38]
Chr18:59810539 [GRCh37]
Chr18:18q21.33
pathogenic
NM_176787.5(PIGN):c.1926A>G (p.Lys642=) single nucleotide variant Multiple congenital anomalies-hypotonia-seizures syndrome 1 [RCV000555870]|not provided [RCV004808777] Chr18:62102836 [GRCh38]
Chr18:59770069 [GRCh37]
Chr18:18q21.33
likely benign
1 to 10 of 1419 rows

Predicted Target Of
Summary Value
Count of predictions:2656
Count of miRNA genes:1000
Interacting mature miRNAs:1209
Transcripts:ENST00000357637, ENST00000400334, ENST00000585344, ENST00000585458, ENST00000585923, ENST00000585926, ENST00000586566, ENST00000587134, ENST00000587942, ENST00000588571, ENST00000588748, ENST00000589098, ENST00000589339, ENST00000589414, ENST00000589720, ENST00000590765, ENST00000590948, ENST00000591238, ENST00000592803, ENST00000593225
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597525525GWAS1621599_Hamyloid-beta measurement, Alzheimer's disease biomarker measurement QTL GWAS1621599 (human)0.0000004amyloid-beta measurement, Alzheimer's disease biomarker measurement186203036362030364Human
597490341GWAS1586415_HCOVID-19 QTL GWAS1586415 (human)0.000009COVID-19186202253462022535Human
406971388GWAS620364_Htrait in response to efavirenz, virologic response measurement QTL GWAS620364 (human)0.000009trait in response to abacavir, virologic response measurement186217168662171687Human
597609777GWAS1666637_Hendocrine system disease QTL GWAS1666637 (human)2e-11endocrine system disease186202067862020679Human
597367604GWAS1463678_Hgut microbiome measurement QTL GWAS1463678 (human)0.000002gut microbiome measurement186202580862025809Human

RH91991  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,712,681 - 59,712,838UniSTSGRCh37
Build 361857,863,661 - 57,863,818RGDNCBI36
Celera1856,431,931 - 56,432,088RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,423,049 - 56,423,206UniSTS
GeneMap99-GB4 RH Map18408.9UniSTS
RH80923  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,711,874 - 59,712,063UniSTSGRCh37
Build 361857,862,854 - 57,863,043RGDNCBI36
Celera1856,431,124 - 56,431,313RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,422,242 - 56,422,431UniSTS
GeneMap99-GB4 RH Map18402.72UniSTS
RH66563  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,711,694 - 59,711,859UniSTSGRCh37
Build 361857,862,674 - 57,862,839RGDNCBI36
Celera1856,430,942 - 56,431,107RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,422,060 - 56,422,225UniSTS
GeneMap99-GB4 RH Map18408.9UniSTS
NCBI RH Map18735.6UniSTS
STS-Z41050  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,711,645 - 59,711,702UniSTSGRCh37
Build 361857,862,625 - 57,862,682RGDNCBI36
Celera1856,430,893 - 56,430,950RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,422,011 - 56,422,068UniSTS
GeneMap99-GB4 RH Map18410.41UniSTS
NCBI RH Map18735.6UniSTS
REN77252  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372232,669,164 - 32,669,404UniSTSGRCh37
GRCh371859,758,637 - 59,758,876UniSTSGRCh37
Build 361857,909,617 - 57,909,856RGDNCBI36
Celera2216,471,383 - 16,471,623UniSTS
Celera1856,477,871 - 56,478,110RGD
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map18q21.33UniSTS
HuRef2215,626,796 - 15,627,036UniSTS
HuRef1856,469,543 - 56,469,782UniSTS
REN77270  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372232,674,261 - 32,674,495UniSTSGRCh37
GRCh371859,762,329 - 59,762,566UniSTSGRCh37
Build 361857,913,309 - 57,913,546RGDNCBI36
Celera1856,481,563 - 56,481,800RGD
Celera2216,476,484 - 16,476,718UniSTS
Cytogenetic Map18q21.33UniSTS
HuRef2215,631,893 - 15,632,127UniSTS
HuRef1856,473,235 - 56,473,472UniSTS
REN77522  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372232,738,982 - 32,739,234UniSTSGRCh37
GRCh371859,747,460 - 59,747,713UniSTSGRCh37
Build 361857,898,440 - 57,898,693RGDNCBI36
Celera1856,466,695 - 56,466,948RGD
Celera2216,541,154 - 16,541,406UniSTS
Cytogenetic Map18q21.33UniSTS
HuRef2215,695,477 - 15,695,729UniSTS
HuRef1856,458,366 - 56,458,619UniSTS
SHGC-44499  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,711,621 - 59,711,721UniSTSGRCh37
Build 361857,862,601 - 57,862,701RGDNCBI36
Celera1856,430,869 - 56,430,969RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,421,987 - 56,422,087UniSTS
TNG Radiation Hybrid Map1824586.0UniSTS
G19812  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,711,556 - 59,711,770UniSTSGRCh37
Build 361857,862,536 - 57,862,750RGDNCBI36
Celera1856,430,804 - 56,431,018RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,421,922 - 56,422,136UniSTS
A001Z15  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,711,556 - 59,711,770UniSTSGRCh37
Build 361857,862,536 - 57,862,750RGDNCBI36
Celera1856,430,804 - 56,431,018RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,421,922 - 56,422,136UniSTS
GeneMap99-GB4 RH Map18391.39UniSTS
SGC44499  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371859,711,640 - 59,711,897UniSTSGRCh37
Build 361857,862,620 - 57,862,877RGDNCBI36
Celera1856,430,888 - 56,431,147RGD
Cytogenetic Map18q21.33UniSTS
HuRef1856,422,006 - 56,422,265UniSTS
GeneMap99-GB4 RH Map18406.82UniSTS
Whitehead-RH Map18451.8UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 30 of 108 rows
RefSeq Transcripts NG_033144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_012327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_176787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017025685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017025686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047437445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 108 rows

Ensembl Acc Id: ENST00000357637   ⟹   ENSP00000350263
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,233 - 62,187,038 (-)Ensembl
Ensembl Acc Id: ENST00000400334   ⟹   ENSP00000383188
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,549 - 62,187,038 (-)Ensembl
Ensembl Acc Id: ENST00000585344   ⟹   ENSP00000465897
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,145,981 - 62,187,118 (-)Ensembl
Ensembl Acc Id: ENST00000585458   ⟹   ENSP00000466883
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,153,569 - 62,187,028 (-)Ensembl
Ensembl Acc Id: ENST00000585923   ⟹   ENSP00000467812
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,157,156 - 62,187,049 (-)Ensembl
Ensembl Acc Id: ENST00000585926   ⟹   ENSP00000468456
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,157,780 - 62,186,313 (-)Ensembl
Ensembl Acc Id: ENST00000586566   ⟹   ENSP00000467410
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,135,741 - 62,187,028 (-)Ensembl
Ensembl Acc Id: ENST00000587134
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,161,352 - 62,187,020 (-)Ensembl
Ensembl Acc Id: ENST00000587942
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,045,342 - 62,110,150 (-)Ensembl
Ensembl Acc Id: ENST00000588571   ⟹   ENSP00000466035
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,112,813 - 62,187,069 (-)Ensembl
Ensembl Acc Id: ENST00000588748
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,146,996 - 62,158,005 (-)Ensembl
Ensembl Acc Id: ENST00000589339   ⟹   ENSP00000465506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,112,811 - 62,187,028 (-)Ensembl
Ensembl Acc Id: ENST00000589414
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,118,547 - 62,154,556 (-)Ensembl
Ensembl Acc Id: ENST00000589720   ⟹   ENSP00000468721
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,153,445 - 62,187,015 (-)Ensembl
Ensembl Acc Id: ENST00000590765   ⟹   ENSP00000464707
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,154,566 - 62,187,053 (-)Ensembl
Ensembl Acc Id: ENST00000590948   ⟹   ENSP00000465241
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,102,811 - 62,109,957 (-)Ensembl
Ensembl Acc Id: ENST00000591238   ⟹   ENSP00000466462
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,136,733 - 62,162,290 (-)Ensembl
Ensembl Acc Id: ENST00000592803   ⟹   ENSP00000466985
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,145,993 - 62,161,337 (-)Ensembl
Ensembl Acc Id: ENST00000593225
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,162,263 - 62,187,038 (-)Ensembl
Ensembl Acc Id: ENST00000638167   ⟹   ENSP00000491549
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,242 - 62,186,998 (-)Ensembl
Ensembl Acc Id: ENST00000638183   ⟹   ENSP00000491013
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,051,788 - 62,187,015 (-)Ensembl
Ensembl Acc Id: ENST00000638329   ⟹   ENSP00000492804
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,112,565 - 62,187,049 (-)Ensembl
Ensembl Acc Id: ENST00000638369   ⟹   ENSP00000491811
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,723 - 62,187,067 (-)Ensembl
Ensembl Acc Id: ENST00000638424   ⟹   ENSP00000491963
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,045,513 - 62,187,015 (-)Ensembl
Ensembl Acc Id: ENST00000638435   ⟹   ENSP00000491850
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,324 - 62,187,024 (-)Ensembl
Ensembl Acc Id: ENST00000638591   ⟹   ENSP00000492660
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,135,653 - 62,187,015 (-)Ensembl
Ensembl Acc Id: ENST00000638858
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,636 - 62,158,008 (-)Ensembl
Ensembl Acc Id: ENST00000638904   ⟹   ENSP00000491318
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,045,435 - 62,187,015 (-)Ensembl
Ensembl Acc Id: ENST00000638936   ⟹   ENSP00000492592
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,634 - 62,187,079 (-)Ensembl
Ensembl Acc Id: ENST00000638977   ⟹   ENSP00000491010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,236 - 62,187,056 (-)Ensembl
Ensembl Acc Id: ENST00000639174   ⟹   ENSP00000492783
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,069,392 - 62,186,993 (-)Ensembl
Ensembl Acc Id: ENST00000639214
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,105,040 - 62,186,975 (-)Ensembl
Ensembl Acc Id: ENST00000639342   ⟹   ENSP00000491022
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,301 - 62,187,017 (-)Ensembl
Ensembl Acc Id: ENST00000639372   ⟹   ENSP00000491459
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,041,164 - 62,102,821 (-)Ensembl
Ensembl Acc Id: ENST00000639491
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,311 - 62,076,027 (-)Ensembl
Ensembl Acc Id: ENST00000639600   ⟹   ENSP00000492474
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1861,905,255 - 62,154,623 (-)Ensembl
Ensembl Acc Id: ENST00000639681   ⟹   ENSP00000491929
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,350 - 62,187,046 (-)Ensembl
Ensembl Acc Id: ENST00000639758   ⟹   ENSP00000491475
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,634 - 62,187,015 (-)Ensembl
Ensembl Acc Id: ENST00000639902   ⟹   ENSP00000490965
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,634 - 62,186,989 (-)Ensembl
Ensembl Acc Id: ENST00000639912   ⟹   ENSP00000490970
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,042,471 - 62,187,017 (-)Ensembl
Ensembl Acc Id: ENST00000640050   ⟹   ENSP00000492051
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,045,681 - 62,184,671 (-)Ensembl
Ensembl Acc Id: ENST00000640145   ⟹   ENSP00000491525
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,234 - 62,187,077 (-)Ensembl
Ensembl Acc Id: ENST00000640170   ⟹   ENSP00000491270
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,240 - 62,186,989 (-)Ensembl
Ensembl Acc Id: ENST00000640248
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,052,549 - 62,075,900 (-)Ensembl
Ensembl Acc Id: ENST00000640252   ⟹   ENSP00000492233
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,041,164 - 62,187,056 (-)Ensembl
Ensembl Acc Id: ENST00000640268   ⟹   ENSP00000491111
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,045,369 - 62,187,077 (-)Ensembl
Ensembl Acc Id: ENST00000640540   ⟹   ENSP00000491620
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,044,257 - 62,187,019 (-)Ensembl
Ensembl Acc Id: ENST00000640593   ⟹   ENSP00000492017
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,045,187 - 62,187,017 (-)Ensembl
Ensembl Acc Id: ENST00000640682   ⟹   ENSP00000491415
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,045,383 - 62,114,626 (-)Ensembl
Ensembl Acc Id: ENST00000640704
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,072,370 - 62,075,181 (-)Ensembl
Ensembl Acc Id: ENST00000640876   ⟹   ENSP00000491628
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1862,042,852 - 62,187,056 (-)Ensembl
RefSeq Acc Id: NM_012327   ⟹   NP_036459
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
GRCh371859,711,457 - 59,854,289 (-)RGD
Build 361857,862,437 - 58,005,269 (-)NCBI Archive
Celera1856,430,705 - 56,573,517 (-)RGD
HuRef1856,421,823 - 56,565,179 (-)RGD
CHM1_11859,707,055 - 59,849,802 (-)NCBI
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
Sequence:
RefSeq Acc Id: NM_176787   ⟹   NP_789744
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
GRCh371859,711,457 - 59,854,289 (-)RGD
Build 361857,862,437 - 58,005,269 (-)NCBI Archive
Celera1856,430,705 - 56,573,517 (-)RGD
HuRef1856,421,823 - 56,565,179 (-)RGD
CHM1_11859,707,055 - 59,849,802 (-)NCBI
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525889   ⟹   XP_011524191
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525890   ⟹   XP_011524192
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525891   ⟹   XP_011524193
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525892   ⟹   XP_011524194
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525893   ⟹   XP_011524195
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525894   ⟹   XP_011524196
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525895   ⟹   XP_011524197
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525896   ⟹   XP_011524198
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525898   ⟹   XP_011524200
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,052,932 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017025685   ⟹   XP_016881174
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047437430   ⟹   XP_047293386
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,049,551 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437431   ⟹   XP_047293387
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,017,615 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437432   ⟹   XP_047293388
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437433   ⟹   XP_047293389
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437434   ⟹   XP_047293390
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437435   ⟹   XP_047293391
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437436   ⟹   XP_047293392
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437437   ⟹   XP_047293393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437438   ⟹   XP_047293394
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437439   ⟹   XP_047293395
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437440   ⟹   XP_047293396
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437441   ⟹   XP_047293397
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437442   ⟹   XP_047293398
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,049,551 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437443   ⟹   XP_047293399
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437444   ⟹   XP_047293400
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437445   ⟹   XP_047293401
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437446   ⟹   XP_047293402
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437447   ⟹   XP_047293403
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437448   ⟹   XP_047293404
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437449   ⟹   XP_047293405
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437450   ⟹   XP_047293406
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437451   ⟹   XP_047293407
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437452   ⟹   XP_047293408
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437453   ⟹   XP_047293409
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437454   ⟹   XP_047293410
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437455   ⟹   XP_047293411
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437456   ⟹   XP_047293412
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437457   ⟹   XP_047293413
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437458   ⟹   XP_047293414
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437459   ⟹   XP_047293415
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,041,164 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437460   ⟹   XP_047293416
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437461   ⟹   XP_047293417
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,017,615 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437462   ⟹   XP_047293418
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437463   ⟹   XP_047293419
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_047437464   ⟹   XP_047293420
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,048,624 - 62,187,056 (-)NCBI
RefSeq Acc Id: XM_054318431   ⟹   XP_054174406
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318432   ⟹   XP_054174407
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318433   ⟹   XP_054174408
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318434   ⟹   XP_054174409
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318435   ⟹   XP_054174410
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,930 (-)NCBI
RefSeq Acc Id: XM_054318436   ⟹   XP_054174411
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318437   ⟹   XP_054174412
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,987 (-)NCBI
RefSeq Acc Id: XM_054318438   ⟹   XP_054174413
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,220,799 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318439   ⟹   XP_054174414
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,255,876 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318440   ⟹   XP_054174415
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,273,261 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318441   ⟹   XP_054174416
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318442   ⟹   XP_054174417
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318443   ⟹   XP_054174418
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318444   ⟹   XP_054174419
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,900 (-)NCBI
RefSeq Acc Id: XM_054318445   ⟹   XP_054174420
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,907 (-)NCBI
RefSeq Acc Id: XM_054318446   ⟹   XP_054174421
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,993 (-)NCBI
RefSeq Acc Id: XM_054318447   ⟹   XP_054174422
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318448   ⟹   XP_054174423
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,273,261 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318449   ⟹   XP_054174424
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,273,261 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318450   ⟹   XP_054174425
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,273,261 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318451   ⟹   XP_054174426
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318452   ⟹   XP_054174427
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318453   ⟹   XP_054174428
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318454   ⟹   XP_054174429
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,922 (-)NCBI
RefSeq Acc Id: XM_054318455   ⟹   XP_054174430
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318456   ⟹   XP_054174431
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,899 (-)NCBI
RefSeq Acc Id: XM_054318457   ⟹   XP_054174432
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318458   ⟹   XP_054174433
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318459   ⟹   XP_054174434
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318460   ⟹   XP_054174435
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318461   ⟹   XP_054174436
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318462   ⟹   XP_054174437
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318463   ⟹   XP_054174438
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318464   ⟹   XP_054174439
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,244,099 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318465   ⟹   XP_054174440
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318466   ⟹   XP_054174441
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,220,799 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318467   ⟹   XP_054174442
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,273,261 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318468   ⟹   XP_054174443
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,273,261 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318469   ⟹   XP_054174444
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,936 (-)NCBI
RefSeq Acc Id: XM_054318470   ⟹   XP_054174445
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
RefSeq Acc Id: XM_054318471   ⟹   XP_054174446
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01862,248,931 - 62,389,867 (-)NCBI
1 to 30 of 115 rows
Protein RefSeqs NP_036459 (Get FASTA)   NCBI Sequence Viewer  
  NP_789744 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524191 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524192 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524193 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524194 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524195 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524196 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524197 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524198 (Get FASTA)   NCBI Sequence Viewer  
  XP_011524200 (Get FASTA)   NCBI Sequence Viewer  
  XP_016881174 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293386 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293387 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293388 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293389 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293390 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293391 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293392 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293393 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293394 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293395 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293396 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293397 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293398 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293399 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293400 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293401 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293402 (Get FASTA)   NCBI Sequence Viewer  
  XP_047293403 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 115 rows
1 to 5 of 129 rows
1 to 5 of 129 rows
RefSeq Acc Id: NP_036459   ⟸   NM_012327
- UniProtKB: Q8TC01 (UniProtKB/Swiss-Prot),   Q7L8F8 (UniProtKB/Swiss-Prot),   Q9NT05 (UniProtKB/Swiss-Prot),   O95427 (UniProtKB/Swiss-Prot),   B2RCI8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_789744   ⟸   NM_176787
- UniProtKB: Q8TC01 (UniProtKB/Swiss-Prot),   Q7L8F8 (UniProtKB/Swiss-Prot),   Q9NT05 (UniProtKB/Swiss-Prot),   O95427 (UniProtKB/Swiss-Prot),   B2RCI8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011524193   ⟸   XM_011525891
- Peptide Label: isoform X1
- UniProtKB: A0A1W2PQA9 (UniProtKB/TrEMBL),   B2RCI8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011524196   ⟸   XM_011525894
- Peptide Label: isoform X1
- UniProtKB: A0A1W2PQA9 (UniProtKB/TrEMBL),   B2RCI8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011524195   ⟸   XM_011525893
- Peptide Label: isoform X1
- UniProtKB: A0A1W2PQA9 (UniProtKB/TrEMBL),   B2RCI8 (UniProtKB/TrEMBL)
- Sequence:
Name Modeler Protein Id AA Range Protein Structure
AF-O95427-F1-model_v2 AlphaFold O95427 1-931 view protein structure

RGD ID:6794959
Promoter ID:HG_KWN:28133
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000256858,   NM_012327,   NM_176787,   OTTHUMT00000256187,   UC002LII.2,   UC002LIJ.2,   UC002LIK.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361858,004,866 - 58,006,437 (-)MPROMDB
RGD ID:7237473
Promoter ID:EPDNEW_H24482
Type:initiation region
Name:PIGN_1
Description:phosphatidylinositol glycan anchor biosynthesis class N
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381862,186,993 - 62,187,053EPDNEW


1 to 40 of 72 rows
Database
Acc Id
Source(s)
COSMIC PIGN COSMIC
Ensembl Genes ENSG00000197563 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000357637 ENTREZGENE
  ENST00000357637.10 UniProtKB/Swiss-Prot
  ENST00000400334 ENTREZGENE
  ENST00000400334.7 UniProtKB/Swiss-Prot
  ENST00000638167 ENTREZGENE
  ENST00000638183 ENTREZGENE
  ENST00000638424 ENTREZGENE
  ENST00000638936 ENTREZGENE
  ENST00000638936.1 UniProtKB/Swiss-Prot
  ENST00000639174 ENTREZGENE
  ENST00000639902 ENTREZGENE
  ENST00000640050.1 UniProtKB/Swiss-Prot
  ENST00000640145.1 UniProtKB/Swiss-Prot
  ENST00000640252 ENTREZGENE
  ENST00000640252.2 UniProtKB/Swiss-Prot
  ENST00000640540 ENTREZGENE
  ENST00000640876 ENTREZGENE
  ENST00000640876.1 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.720.10 UniProtKB/Swiss-Prot
GTEx ENSG00000197563 GTEx
HGNC ID HGNC:8967 ENTREZGENE
Human Proteome Map PIGN Human Proteome Map
InterPro Alkaline_phosphatase_core_sf UniProtKB/Swiss-Prot
  GPI_EtnP_transferase_1 UniProtKB/Swiss-Prot
  GPI_EtnP_transferase_1_C UniProtKB/Swiss-Prot
  Phosphodiest/P_Trfase UniProtKB/Swiss-Prot
  PIGN_N UniProtKB/Swiss-Prot
KEGG Report hsa:23556 UniProtKB/Swiss-Prot
NCBI Gene 23556 ENTREZGENE
OMIM 606097 OMIM
PANTHER GPI ETHANOLAMINE PHOSPHATE TRANSFERASE 1 UniProtKB/Swiss-Prot
  PTHR12250 UniProtKB/Swiss-Prot
Pfam Phosphodiest UniProtKB/Swiss-Prot
  PigN UniProtKB/Swiss-Prot
PharmGKB PA33298 PharmGKB
Superfamily-SCOP SSF53649 UniProtKB/Swiss-Prot
UniProt A0A1W2PNH8_HUMAN UniProtKB/TrEMBL
  A0A1W2PNQ8_HUMAN UniProtKB/TrEMBL
1 to 40 of 72 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-04-14 PIGN  phosphatidylinositol glycan anchor biosynthesis class N  LOC105372158  uncharacterized LOC105372158  Data merged from RGD:38675425 737654 PROVISIONAL
2015-11-10 PIGN  phosphatidylinositol glycan anchor biosynthesis class N  PIGN  phosphatidylinositol glycan anchor biosynthesis, class N  Symbol and/or name change 5135510 APPROVED