rs62097170 Rat Genome Database
Welcome
Sign In
Message Center
1 Messages
Go to Message Center
Watched Genes
Watched Ontology Terms
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
Subscribe to Updates
Select categories you would like to watch. Updates to this gene will be sent to Sign In
Analyze List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailable
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants)
unavailable
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
Summary
ClinVar Data
Variant Details
Variant Transcripts
Variant Samples
Additional Information
External Database Links
Variant: rs62097170 - Homo sapiens
RGD ID:
150484508
RS ID:
rs62097170
ClinVar ID:
CV1222511
Genic Status:
GENIC
Type:
SNV
(SO:0001483)
Associated Genes:
PIGN
Reference Nucleotide:
T
Variant Nucleotide:
C
Position
Assembly
Chr
Position
GRCh37
18
59,805,996
GRCh38
18
62,138,763
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
ClinVar Data
HGVS Name(s)
Last Evaluated
Molecular Consequence
Clinical Significance
Trait Synonyms
NC_000018.10:g.62138763T>C
NC_000018.9:g.59805996T>C
NM_012327.6:c.1116+220A>G
NM_176787.5:c.1116+220A>G
NG_033144.1:g.53294A>G
More...
07/05/2018
intron variant
benign
none provided
Variant Details
Variant Transcripts
Gene Symbol:
PIGN
Accession:
XM_011525898
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437450
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437430
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525893
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437461
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437459
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437452
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525896
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437458
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525892
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437439
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437441
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525894
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437435
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437453
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525890
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437444
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437451
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437456
Location:
INTRON
Gene Symbol:
PIGN
Accession:
NM_176787
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525895
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437431
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437433
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437463
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437432
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437457
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437442
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525889
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_017025685
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437440
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437438
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437454
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437449
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437443
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437447
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437448
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437445
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_011525891
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437436
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437434
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437455
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437464
Location:
INTRON
Gene Symbol:
PIGN
Accession:
NM_012327
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437437
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437462
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437460
Location:
INTRON
Gene Symbol:
PIGN
Accession:
XM_047437446
Location:
INTRON
.
Variant Samples
1 to 1 of 1 rows
10
20
30
40
100
All Rows
ClinVar GRCh37
ClinVar GRCh38
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Additional Information
External Database Links
1 to 5 of 5 rows
3
5
10
20
40
100
All Rows
Database
Acc Id
Source(s)
ClinVar
RCV001617514
CLINVAR
dbSNP (RS)
rs62097170
CLINVAR
MedGen
C3661900
CLINVAR
NCBI Gene
PIGN
CLINVAR
OMIM
606097
CLINVAR
1 to 5 of 5 rows
3
5
10
20
40
100
All Rows