Ndufb10 (NADH:ubiquinone oxidoreductase subunit B10) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ndufb10 (NADH:ubiquinone oxidoreductase subunit B10) Rattus norvegicus
Analyze
Symbol: Ndufb10
Name: NADH:ubiquinone oxidoreductase subunit B10
RGD ID: 1310782
Description: Predicted to be located in mitochondrion. Predicted to be part of respiratory chain complex I. Predicted to be active in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 35. Orthologous to human NDUFB10 (NADH:ubiquinone oxidoreductase subunit B10); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC287121; LOC681418; NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW)
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,253,805 - 14,255,966 (-)NCBIGRCr8
mRatBN7.21013,749,273 - 13,751,434 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,749,275 - 13,751,442 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1018,496,065 - 18,498,341 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,984,925 - 17,987,201 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,484,121 - 13,486,397 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01014,090,128 - 14,092,289 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1014,090,128 - 14,092,289 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01013,905,856 - 13,908,017 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,977,307 - 13,979,468 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1013,428,991 - 13,431,152 (-)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ndufb10Ratdevelopmental and epileptic encephalopathy 1  ISONDUFB10 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 1ClinVarPMID:28492532 and PMID:30866059
Ndufb10Ratepilepsy  ISONDUFB10 (Homo sapiens)8554872ClinVar Annotator: match by term: EpilepsyClinVarPMID:28492532
Ndufb10RatIdiopathic Generalized Epilepsy  ISONDUFB10 (Homo sapiens)8554872ClinVar Annotator: match by term: Idiopathic generalized epilepsyClinVarPMID:28492532
Ndufb10Ratmitochondrial complex I deficiency  ISONDUFB10 (Homo sapiens)8554872ClinVar Annotator: match by term: Mitochondrial complex I deficiencyClinVarPMID:25741868
Ndufb10Ratnuclear type mitochondrial complex I deficiency 35  ISONDUFB10 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:28040730 and PMID:28492532
Ndufb10Ratshort-rib thoracic dysplasia 9 with or without polydactyly  ISONDUFB10 (Homo sapiens)8554872ClinVar Annotator: match by term: Saldino-Mainzer syndromeClinVarPMID:28492532
Ndufb10Rattuberous sclerosis 2  ISONDUFB10 (Homo sapiens)8554872ClinVar Annotator: match by term: Tuberous sclerosis 2ClinVarPMID:10205261 more ...
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ndufb10Ratnuclear type mitochondrial complex I deficiency 35  ISONDUFB10 (Homo sapiens)7240710 OMIM 

1 to 20 of 90 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ndufb10Rat1,2-dimethylhydrazine multiple interactionsISONdufb10 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of NDUFB10 mRNACTDPMID:22206623
Ndufb10Rat17beta-estradiol decreases expressionISONdufb10 (Mus musculus)6480464Estradiol results in decreased expression of NDUFB10 mRNACTDPMID:39298647
Ndufb10Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of NDUFB10 mRNACTDPMID:21215274
Ndufb10Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of NDUFB10 mRNACTDPMID:33387578
Ndufb10Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISONdufb10 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of NDUFB10 mRNACTDPMID:21570461
Ndufb10Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISONdufb10 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of NDUFB10 mRNACTDPMID:20399798
Ndufb10Rat2-hydroxypropanoic acid decreases expressionISONDUFB10 (Homo sapiens)6480464Lactic Acid results in decreased expression of NDUFB10 mRNACTDPMID:30851411
Ndufb10Rat4,4'-sulfonyldiphenol increases expressionISONdufb10 (Mus musculus)6480464bisphenol S results in increased expression of NDUFB10 mRNACTDPMID:39298647
Ndufb10Rat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of NDUFB10 mRNACTDPMID:36041667
Ndufb10Rat4,4'-sulfonyldiphenol increases expressionISONDUFB10 (Homo sapiens)6480464bisphenol S results in increased expression of NDUFB10 proteinCTDPMID:34186270
Ndufb10Rat5-fluorouracil affects expressionISONDUFB10 (Homo sapiens)6480464Fluorouracil affects the expression of NDUFB10 mRNACTDPMID:34151400
Ndufb10Ratactinomycin D multiple interactionsISONDUFB10 (Homo sapiens)6480464[Dactinomycin co-treated with nutlin 3] results in increased secretion of NDUFB10 proteinCTDPMID:38460933
Ndufb10Ratarsane multiple interactionsISONDUFB10 (Homo sapiens)6480464[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of NDUFB10 mRNACTDPMID:39836092
Ndufb10Ratarsenic atom multiple interactionsISONDUFB10 (Homo sapiens)6480464[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of NDUFB10 mRNACTDPMID:39836092
Ndufb10Ratarsenite(3-) multiple interactionsISONDUFB10 (Homo sapiens)6480464arsenite promotes the reaction [G3BP1 protein binds to NDUFB10 mRNA]CTDPMID:32406909
Ndufb10Rataspartame multiple interactionsISONdufb10 (Mus musculus)6480464[Fats more ...CTDPMID:23783067
Ndufb10Ratatrazine decreases expressionISONDUFB10 (Homo sapiens)6480464Atrazine results in decreased expression of NDUFB10 mRNACTDPMID:22378314
Ndufb10Ratbenzo[a]pyrene increases expressionISONdufb10 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of NDUFB10 mRNACTDPMID:19770486 and PMID:22228805
Ndufb10Ratbenzo[a]pyrene increases methylationISONDUFB10 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of NDUFB10 promoterCTDPMID:27901495
Ndufb10Ratbeta-lapachone decreases expressionISONDUFB10 (Homo sapiens)6480464beta-lapachone results in decreased expression of NDUFB10 mRNACTDPMID:38218311

1 to 20 of 90 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ndufb10Ratbiological_process  ND 159840712/2008: no relevant rat dataRGD 

Cellular Component
1 to 15 of 15 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ndufb10Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Ndufb10Ratmitochondrial inner membrane is_active_inISONdufb10 (Mus musculus)1624291 PMID:38575788RGDPMID:38575788
Ndufb10Ratmitochondrial inner membrane located_inIEAUniProtKB-SubCell:SL-01681600115GO_REF:0000044UniProtGO_REF:0000044
Ndufb10Ratmitochondrial inner membrane located_inIEAUniProtKB-KW:KW-09991600115GO_REF:0000043UniProtGO_REF:0000043
Ndufb10Ratmitochondrial inner membrane is_active_inIEAUniProtKB:Q9DCS9 and ensembl:ENSMUSP000000435431600115GO_REF:0000107EnsemblGO_REF:0000107
Ndufb10Ratmitochondrial inner membrane located_inIEAUniProtKB:O96000 and ensembl:ENSP000002686681600115GO_REF:0000107EnsemblGO_REF:0000107
Ndufb10Ratmitochondrial inner membrane located_inISONDUFB10 (Homo sapiens)1624291 PMID:28040730 and PMID:28844695RGDPMID:28040730 and PMID:28844695
Ndufb10Ratmitochondrion located_inIEAARBA:ARBA000269621600115GO_REF:0000117UniProtGO_REF:0000117
Ndufb10Ratmitochondrion located_inIEAUniProtKB-KW:KW-04961600115GO_REF:0000043UniProtGO_REF:0000043
Ndufb10Ratrespiratory chain complex I part_ofISONDUFB10 (Homo sapiens)1624291 PMID:12611891 and PMID:27626371RGDPMID:12611891 and PMID:27626371
Ndufb10Ratrespiratory chain complex I part_ofIEAARBA:ARBA000276361600115GO_REF:0000117UniProtGO_REF:0000117
Ndufb10Ratrespiratory chain complex I part_ofIBAFB:FBgn0021967 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ndufb10Ratrespiratory chain complex I part_ofIEAUniProtKB:Q9DCS9 and ensembl:ENSMUSP000000435431600115GO_REF:0000107EnsemblGO_REF:0000107
Ndufb10Ratrespiratory chain complex I part_ofIEAUniProtKB:O96000 and ensembl:ENSP000002686681600115GO_REF:0000107EnsemblGO_REF:0000107
Ndufb10Ratrespiratory chain complex I part_ofISONdufb10 (Mus musculus)1624291 PMID:38575788RGDPMID:38575788
1 to 15 of 15 rows

Molecular Function

  

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ndufb10RatAlzheimer's disease pathway   IEA 6907045 KEGGrno:05010
Ndufb10RatHuntington's disease pathway   IEA 6907045 KEGGrno:05016
Ndufb10Ratoxidative phosphorylation pathway  IEA 6907045 KEGGrno:00190
Ndufb10RatParkinson's disease pathway   IEA 6907045 KEGGrno:05012

#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
PMID:12611891   PMID:12865426   PMID:14651853   PMID:18614015   PMID:21700703   PMID:23376485   PMID:27626371   PMID:34800366  



Ndufb10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,253,805 - 14,255,966 (-)NCBIGRCr8
mRatBN7.21013,749,273 - 13,751,434 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,749,275 - 13,751,442 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1018,496,065 - 18,498,341 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,984,925 - 17,987,201 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,484,121 - 13,486,397 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01014,090,128 - 14,092,289 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1014,090,128 - 14,092,289 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01013,905,856 - 13,908,017 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,977,307 - 13,979,468 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1013,428,991 - 13,431,152 (-)NCBICelera
Cytogenetic Map10q12NCBI
NDUFB10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38161,959,538 - 1,961,975 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl161,959,538 - 1,961,975 (+)EnsemblGRCh38hg38GRCh38
GRCh37162,009,539 - 2,011,976 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36161,949,520 - 1,951,977 (+)NCBINCBI36Build 36hg18NCBI36
Build 34161,949,519 - 1,951,977NCBI
Celera162,221,698 - 2,224,158 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef161,933,643 - 1,936,103 (+)NCBIHuRef
CHM1_1162,009,462 - 2,011,922 (+)NCBICHM1_1
T2T-CHM13v2.0161,979,496 - 1,981,934 (+)NCBIT2T-CHM13v2.0
Ndufb10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391724,941,034 - 24,943,397 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1724,941,034 - 24,943,452 (-)EnsemblGRCm39 Ensembl
GRCm381724,722,060 - 24,724,423 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1724,722,060 - 24,724,478 (-)EnsemblGRCm38mm10GRCm38
MGSCv371724,859,012 - 24,861,333 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361724,449,667 - 24,451,988 (-)NCBIMGSCv36mm8
Celera1725,245,195 - 25,247,516 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.51NCBI
Ndufb10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,306,741 - 15,309,167 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544215,306,688 - 15,309,281 (-)NCBIChiLan1.0ChiLan1.0
NDUFB10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2182,385,452 - 2,389,332 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1166,167,362 - 6,171,242 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v016742,402 - 744,850 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1162,048,550 - 2,051,005 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl162,048,550 - 2,051,005 (+)Ensemblpanpan1.1panPan2
NDUFB10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,968,737 - 38,971,214 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,968,742 - 38,971,196 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha640,208,429 - 40,210,907 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0639,285,757 - 39,288,235 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl639,282,767 - 39,288,119 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,962,532 - 38,965,010 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,934,840 - 38,937,318 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,413,727 - 39,416,205 (-)NCBIUU_Cfam_GSD_1.0
Ndufb10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,633,467 - 104,635,982 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366942,073,354 - 2,076,043 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366942,073,481 - 2,075,989 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFB10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl340,003,115 - 40,005,588 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1340,003,109 - 40,005,650 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
NDUFB10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,856,476 - 1,859,336 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl51,856,157 - 1,862,529 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606829,217,128 - 29,219,978 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufb10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624913297,732 - 300,213 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624913297,657 - 300,348 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Ndufb10
7 total Variants

Predicted Target Of
Summary Value
Count of predictions:47
Count of miRNA genes:46
Interacting mature miRNAs:46
Transcripts:ENSRNOT00000019624
Prediction methods:Microtar, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 25 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10129497586Rat

1 to 10 of 25 rows
RH128247  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81014,253,891 - 14,254,198 (+)Marker Load Pipeline
mRatBN7.21013,749,359 - 13,749,666 (+)MAPPERmRatBN7.2
Rnor_6.01014,090,215 - 14,090,521NCBIRnor6.0
Rnor_5.01013,905,943 - 13,906,249UniSTSRnor5.0
RGSC_v3.41013,977,394 - 13,977,700UniSTSRGSC3.4
Celera1013,429,078 - 13,429,384UniSTS
RH 3.4 Map10191.3UniSTS
Cytogenetic Map10q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000019624   ⟹   ENSRNOP00000019624
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1013,749,275 - 13,751,442 (-)Ensembl
Rnor_6.0 Ensembl1014,090,128 - 14,092,289 (-)Ensembl
RefSeq Acc Id: NM_001109443   ⟹   NP_001102913
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,253,805 - 14,255,966 (-)NCBI
mRatBN7.21013,749,273 - 13,751,434 (-)NCBI
Rnor_6.01014,090,128 - 14,092,289 (-)NCBI
Rnor_5.01013,905,856 - 13,908,017 (-)NCBI
RGSC_v3.41013,977,307 - 13,979,468 (-)RGD
Celera1013,428,991 - 13,431,152 (-)RGD
Sequence:
Protein RefSeqs NP_001102913 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM03875 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000019624
  ENSRNOP00000019624.5
RefSeq Acc Id: NP_001102913   ⟸   NM_001109443
- UniProtKB: A6HCX0 (UniProtKB/TrEMBL),   D4A0T0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000019624   ⟸   ENSRNOT00000019624

Name Modeler Protein Id AA Range Protein Structure
AF-D4A0T0-F1-model_v2 AlphaFold D4A0T0 1-176 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13697025
Promoter ID:EPDNEW_R7550
Type:initiation region
Name:Ndufb10_1
Description:NADH:ubiquinone oxidoreductase subunit B10
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01014,092,268 - 14,092,328EPDNEW


1 to 17 of 17 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-25826 BioCyc
BioCyc Pathway PWY-3781 [aerobic respiration I (cytochrome c)] BioCyc
BioCyc Pathway Image PWY-3781 BioCyc
Ensembl Genes ENSRNOG00000014568 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019624 ENTREZGENE
  ENSRNOT00000019624.6 UniProtKB/TrEMBL
InterPro NADH_UbQ_OxRdtase_su10 UniProtKB/TrEMBL
  NDUFB10 UniProtKB/TrEMBL
KEGG Report rno:681418 UniProtKB/TrEMBL
NCBI Gene Ndufb10 ENTREZGENE
PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 10 UniProtKB/TrEMBL
  PTHR13094 UniProtKB/TrEMBL
Pfam NDUFB10 UniProtKB/TrEMBL
PhenoGen Ndufb10 PhenoGen
RatGTEx ENSRNOG00000014568 RatGTEx
UniProt A6HCX0 ENTREZGENE, UniProtKB/TrEMBL
  D4A0T0 ENTREZGENE, UniProtKB/TrEMBL
1 to 17 of 17 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-12 Ndufb10  NADH:ubiquinone oxidoreductase subunit B10  Ndufb10  NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2009-06-15 Ndufb10  NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10   LOC681867  similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW)  Data merged from RGD:1590497 1643240 APPROVED
2008-12-12 Ndufb10  NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10   LOC681418  similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW)  Data merged from RGD:1595406 737654 APPROVED
2008-04-30 Ndufb10  NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10   Ndufb10_predicted  NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 (predicted)  'predicted' is removed 2292626 APPROVED
2006-11-20 LOC681418  similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW)      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC681867  similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW)      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-12 Ndufb10_predicted  NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 (predicted)      Symbol and Name status set to approved 70820 APPROVED