Gene: RGD1306227 (similar to 4833420G17Rik protein) Rattus norvegicus
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Symbol: RGD1306227
Name: similar to 4833420G17Rik protein
Description: INTERACTS WITH acrylamide; bisphenol A; endosulfan
AGR Description: Orthologous to human C5orf34 (chromosome 5 open reading frame 34).
Merged Description: Orthologous to human C5orf34 (chromosome 5 open reading frame 34); INTERACTS WITH acrylamide; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC310377; LOC310377; uncharacterized protein C5orf34 homolog
Orthologs:
Homo sapiens (human) : C5orf34 (chromosome 5 open reading frame 34)  HGNC  Alliance
Mus musculus (house mouse) : 4833420G17Rik (RIKEN cDNA 4833420G17 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102003916 (chromosome unknown open reading frame, human C5orf34)
Pan paniscus (bonobo/pygmy chimpanzee) : C5H5orf34 (chromosome 5 C5orf34 homolog)
Canis lupus familiaris (dog) : C4H5orf34 (chromosome 4 C5orf34 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH5orf34 (chromosome unknown C5orf34 homolog)
Sus scrofa (pig) : C16H5orf34 (chromosome 16 C5orf34 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0252,333,396 - 52,355,044 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0270,696,592 - 70,718,964 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4251,642,381 - 51,664,029 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1251,570,613 - 51,592,260 (+)NCBI
Celera247,210,389 - 47,232,051 (+)NCBICelera
Cytogenetic Map2q15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on RGD1306227
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306227
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.