Symbol:
Rbp4
Name:
retinol binding protein 4
RGD ID:
12507916
Description:
ENCODES a protein that exhibits protein-containing complex binding (ortholog); retinol binding (ortholog); INVOLVED IN response to ethanol (ortholog); response to muscle activity (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute pyelonephritis (ortholog); Alcoholic Liver Diseases (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
retinol-binding protein 4
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 39,768,612 - 39,777,592 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936601 1,402,691 - 1,410,208 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936601 1,401,215 - 1,410,195 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Rbp4 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 39,768,612 - 39,777,592 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936601 1,402,691 - 1,410,208 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936601 1,401,215 - 1,410,195 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
RBP4 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 10 93,591,694 - 93,601,744 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 10 93,591,687 - 93,601,744 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 10 95,351,451 - 95,361,501 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 10 95,341,583 - 95,350,983 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 10 95,341,583 - 95,350,983 NCBI Celera 10 89,092,718 - 89,102,118 (-) NCBI Celera Cytogenetic Map 10 q23.33 NCBI HuRef 10 88,979,353 - 88,988,753 (-) NCBI HuRef CHM1_1 10 95,634,147 - 95,643,547 (-) NCBI CHM1_1 T2T-CHM13v2.0 10 94,471,646 - 94,481,695 (-) NCBI T2T-CHM13v2.0
Rbp4 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 19 38,105,068 - 38,113,769 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 19 38,105,077 - 38,113,729 (-) Ensembl GRCm39 Ensembl GRCm38 19 38,116,620 - 38,125,321 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 19 38,116,629 - 38,125,281 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 19 38,191,110 - 38,199,811 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 19 38,181,773 - 38,190,392 (-) NCBI MGSCv36 mm8 Celera 19 38,908,311 - 38,919,212 (-) NCBI Celera Cytogenetic Map 19 C2 NCBI cM Map 19 32.75 NCBI
Rbp4 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 245,306,349 - 245,313,551 (-) NCBI GRCr8 mRatBN7.2 1 235,893,917 - 235,901,315 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 235,893,917 - 235,901,399 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 1 244,315,318 - 244,322,517 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 1 251,211,097 - 251,218,299 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 1 244,049,331 - 244,056,533 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 1 256,806,476 - 256,813,678 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 256,806,472 - 256,813,711 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 264,286,998 - 264,294,396 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 242,443,795 - 242,450,997 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 1 242,637,193 - 242,644,147 (-) NCBI Celera 1 232,987,269 - 232,994,470 (-) NCBI Celera RH 3.4 Map 1 1581.5 RGD Cytogenetic Map 1 q53 NCBI
Rbp4 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955507 108,669 - 120,584 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955507 112,342 - 120,050 (-) NCBI ChiLan1.0 ChiLan1.0
RBP4 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 8 105,629,725 - 105,639,359 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 10 105,635,040 - 105,644,675 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 10 90,337,879 - 90,347,530 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 10 93,848,166 - 93,857,679 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 10 93,848,166 - 93,857,887 (-) Ensembl panpan1.1 panPan2
RBP4 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 28 7,822,936 - 7,830,735 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 28 7,822,944 - 7,830,750 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 28 7,999,367 - 8,007,133 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 28 8,083,216 - 8,090,965 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 28 8,083,226 - 8,090,980 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 28 7,802,939 - 7,810,708 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 28 7,832,158 - 7,839,906 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 28 8,002,083 - 8,009,832 (-) NCBI UU_Cfam_GSD_1.0
RBP4 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 14 105,037,464 - 105,044,765 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 14 105,037,360 - 105,044,552 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 14 114,769,053 - 114,775,781 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
RBP4 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 9 86,831,042 - 86,840,668 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 9 86,830,957 - 86,840,250 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666048 47,606,135 - 47,615,805 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Rbp4
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000016097 ⟹ ENSSTOP00000014409
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936601 1,402,691 - 1,410,208 (+) Ensembl
RefSeq Acc Id:
XM_005333762 ⟹ XP_005333819
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024407213 39,768,612 - 39,777,592 (+) NCBI SpeTri2.0 NW_004936601 1,401,215 - 1,410,195 (+) NCBI
Sequence:
ATGGAGACTCAGCTGATATTTTATGAAAGGAATCTTAAGAAATTTCTTTGCCATATCACCAATTCTCATTCAGCCAAAATCTTGATTGCTTTGTTCTCCGGGACCTGGTACGCCATAGCCAAGAAGGA
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RefSeq Acc Id:
XP_005333819 ⟸ XM_005333762
- UniProtKB:
I3MQX1 (UniProtKB/TrEMBL)
- Sequence:
METQLIFYERNLKKFLCHITNSHSAKILIALFSGTWYAIAKKDPEGLFLQDNIVAEFSVDENGHMSATAKGRVRLLSNWEVCADMVGTFTDTEDPAKFKMKYWGVASFLQRGIDDHWIIDTDYHTFAL
hide sequence
Ensembl Acc Id:
ENSSTOP00000014409 ⟸ ENSSTOT00000016097
