Hr (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404943 | 12,612,526 - 12,634,082 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936555 | 5,936,220 - 5,954,974 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936555 | 5,936,431 - 5,954,852 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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HR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 8 | 22,114,419 - 22,131,052 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 22,114,419 - 22,133,384 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 21,971,932 - 21,988,565 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 22,027,877 - 22,043,975 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 22,028,526 - 22,045,326 | NCBI | | | | | Celera | 8 | 20,934,236 - 20,950,880 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | p21.3 | NCBI | | | | | HuRef | 8 | 20,514,477 - 20,541,503 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 22,173,616 - 22,190,245 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 22,388,371 - 22,405,000 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Hr (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 14 | 70,789,644 - 70,810,988 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 70,789,652 - 70,810,988 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 70,554,056 - 70,573,548 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 70,552,212 - 70,573,548 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 70,953,863 - 70,973,350 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 69,289,136 - 69,308,623 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 68,095,776 - 68,115,052 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | D2 | NCBI | | | | | cM Map | 14 | 36.32 | NCBI | | | | |
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Hr (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 15 | 52,036,540 - 52,056,019 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 15 | 45,626,835 - 45,646,313 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 15 | 45,626,835 - 45,646,313 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 15 | 49,744,700 - 49,764,175 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 15 | 50,856,205 - 50,875,680 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 15 | 47,715,507 - 47,734,986 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 15 | 52,241,801 - 52,261,276 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 15 | 52,241,801 - 52,261,276 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 15 | 55,967,613 - 55,984,797 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 15 | 50,957,053 - 50,972,842 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 15 | 50,972,821 - 50,988,623 (+) | NCBI | | | | | Celera | 15 | 45,305,217 - 45,324,692 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | p11 | NCBI | | | | |
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Hr (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955403 | 45,605,510 - 45,624,402 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955403 | 45,605,870 - 45,624,386 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HR (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 7 | 40,616,243 - 40,630,986 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 16,341,438 - 16,357,572 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 21,359,348 - 21,378,315 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 18,298,709 - 18,316,151 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 18,298,709 - 18,316,151 (-) | Ensembl | panpan1.1 | | panPan2 | |
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HR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 25 | 35,120,566 - 35,136,560 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 25 | 35,119,784 - 35,135,545 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 25 | 35,710,085 - 35,727,556 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 25 | 35,332,063 - 35,349,535 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 25 | 35,333,417 - 35,347,559 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 25 | 35,277,299 - 35,294,762 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 25 | 35,131,873 - 35,149,314 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 25 | 35,287,349 - 35,304,802 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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HR (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 6,386,903 - 6,407,031 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 6,386,900 - 6,404,968 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 6,822,598 - 6,840,654 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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HR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 20,183,797 - 20,207,510 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 20,183,677 - 20,198,700 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666052 | 22,028,581 - 22,052,527 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hr (Heterocephalus glaber - naked mole-rat) |
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