Symbol:
Hr
Name:
HR lysine demethylase and nuclear receptor corepressor
RGD ID:
12486025
Description:
ENCODES a protein that exhibits histone deacetylase binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); INVOLVED IN negative regulation of DNA-binding transcription factor activity (ortholog); ASSOCIATED WITH alopecia (ortholog); alopecia universalis (ortholog); atrichia with papular lesions (ortholog); FOUND IN histone deacetylase complex (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
hair growth associated; HR, lysine demethylase and nuclear receptor corepressor; HR, lysine demethylase and nuclear receptor corepressor, transcript variant X1; HR, lysine demethylase and nuclear receptor corepressor, transcript variant X2; lysine-specific demethylase hairless
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404943 12,612,526 - 12,634,082 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936555 5,936,220 - 5,954,974 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936555 5,936,431 - 5,954,852 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Hr Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404943 12,612,526 - 12,634,082 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936555 5,936,220 - 5,954,974 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936555 5,936,431 - 5,954,852 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
HR Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 8 22,114,419 - 22,131,052 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 8 22,114,419 - 22,133,384 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 8 21,971,932 - 21,988,565 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 8 22,027,877 - 22,043,975 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 8 22,028,526 - 22,045,326 NCBI Celera 8 20,934,236 - 20,950,880 (-) NCBI Celera Cytogenetic Map 8 p21.3 NCBI HuRef 8 20,514,477 - 20,541,503 (-) NCBI HuRef CHM1_1 8 22,173,616 - 22,190,245 (-) NCBI CHM1_1 T2T-CHM13v2.0 8 22,388,371 - 22,405,000 (-) NCBI T2T-CHM13v2.0
Hr Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 14 70,789,644 - 70,810,988 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 14 70,789,652 - 70,810,988 (+) Ensembl GRCm39 Ensembl GRCm38 14 70,554,056 - 70,573,548 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 14 70,552,212 - 70,573,548 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 14 70,953,863 - 70,973,350 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 14 69,289,136 - 69,308,623 (+) NCBI MGSCv36 mm8 Celera 14 68,095,776 - 68,115,052 (+) NCBI Celera Cytogenetic Map 14 D2 NCBI cM Map 14 36.32 NCBI
Hr Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 15 52,036,540 - 52,056,019 (+) NCBI GRCr8 mRatBN7.2 15 45,626,835 - 45,646,313 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 15 45,626,835 - 45,646,313 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 15 49,744,700 - 49,764,175 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 15 50,856,205 - 50,875,680 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 15 47,715,507 - 47,734,986 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 15 52,241,801 - 52,261,276 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 15 52,241,801 - 52,261,276 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 15 55,967,613 - 55,984,797 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 15 50,957,053 - 50,972,842 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 15 50,972,821 - 50,988,623 (+) NCBI Celera 15 45,305,217 - 45,324,692 (+) NCBI Celera Cytogenetic Map 15 p11 NCBI
Hr Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955403 45,605,510 - 45,624,402 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955403 45,605,870 - 45,624,386 (-) NCBI ChiLan1.0 ChiLan1.0
HR Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 7 40,616,243 - 40,630,986 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 8 16,341,438 - 16,357,572 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 8 21,359,348 - 21,378,315 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 8 18,298,709 - 18,316,151 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 8 18,298,709 - 18,316,151 (-) Ensembl panpan1.1 panPan2
HR Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 25 35,120,566 - 35,136,560 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 25 35,119,784 - 35,135,545 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 25 35,710,085 - 35,727,556 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 25 35,332,063 - 35,349,535 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 25 35,333,417 - 35,347,559 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 25 35,277,299 - 35,294,762 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 25 35,131,873 - 35,149,314 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 25 35,287,349 - 35,304,802 (+) NCBI UU_Cfam_GSD_1.0
HR Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 14 6,386,903 - 6,407,031 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 14 6,386,900 - 6,404,968 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 14 6,822,598 - 6,840,654 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
HR Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 8 20,183,797 - 20,207,510 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 8 20,183,677 - 20,198,700 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666052 22,028,581 - 22,052,527 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Hr
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000016515 ⟹ ENSSTOP00000014779
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936555 5,936,220 - 5,954,974 (-) Ensembl
RefSeq Acc Id:
XM_005329303 ⟹ XP_005329360
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024404943 12,615,632 - 12,634,082 (+) NCBI SpeTri2.0 NW_004936555 5,936,431 - 5,954,852 (-) NCBI
Sequence:
GATTAGTGGCAGCTTGGCCTGACTCTCCGGGGCTCCTTCCCCCGCCCTGCCTGCTGCCCACCCCTGGGCAGGGGGCTGCTCCACCGAGGGGCACTGTGCTTGCCCAGGGTGCTGGAGGAGGAAACCGG
hide sequence
RefSeq Acc Id:
XM_013360343 ⟹ XP_013215797
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024404943 12,615,632 - 12,634,082 (+) NCBI SpeTri2.0 NW_004936555 5,936,431 - 5,954,852 (-) NCBI
Sequence:
GATTAGTGGCAGCTTGGCCTGACTCTCCGGGGCTCCTTCCCCCGCCCTGCCTGCTGCCCACCCC
hide sequence
RefSeq Acc Id:
XM_040293157 ⟹ XP_040149091
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024404943 12,612,526 - 12,634,082 (+) NCBI
RefSeq Acc Id:
XP_005329360 ⟸ XM_005329303
- Peptide Label:
isoform X2
- UniProtKB:
I3MRP4 (UniProtKB/TrEMBL)
- Sequence:
MESTPSFLKDTPAWEKTAPENGIVGQEPGTPPRDSLRHGALCLGEPAPFWRGILSTPDSWFPPGFPQGPKDTLPLVEGEGPRNGERKASWLGSKEGLRWKEAMLAHPLAFCGPACPPRYGPFIPEHSG
hide sequence
RefSeq Acc Id:
XP_013215797 ⟸ XM_013360343
- Peptide Label:
isoform X1
- Sequence:
MESTPSFLKDTPAWEKTAPENGIVGQEPGTPPRDSLRHGALCLGEPAPFWRGILSTPDSWFPPG
hide sequence
RefSeq Acc Id:
XP_040149091 ⟸ XM_040293157
- Peptide Label:
isoform X1
Ensembl Acc Id:
ENSSTOP00000014779 ⟸ ENSSTOT00000016515
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2019-01-29
Hr
HR lysine demethylase and nuclear receptor corepressor
HR, lysine demethylase and nuclear receptor corepressor
Symbol and/or name change
5135510 APPROVED
