PLD1 (phospholipase D1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: PLD1 (phospholipase D1) Canis lupus familiaris
Analyze
Symbol: PLD1
Name: phospholipase D1
RGD ID: 12282137
Description: ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); phosphatidic acid biosynthetic process (ortholog); phospholipid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN Golgi cisterna (ortholog); lamellipodium (ortholog); synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13435,917,759 - 36,080,383 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3435,921,058 - 36,121,631 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3444,928,877 - 45,133,990 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03436,000,267 - 36,205,332 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3436,000,274 - 36,205,751 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13435,940,863 - 36,145,600 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03435,903,822 - 36,109,331 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03436,165,953 - 36,370,780 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PLD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13435,917,759 - 36,080,383 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3435,921,058 - 36,121,631 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3444,928,877 - 45,133,990 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03436,000,267 - 36,205,332 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3436,000,274 - 36,205,751 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13435,940,863 - 36,145,600 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03435,903,822 - 36,109,331 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03436,165,953 - 36,370,780 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
PLD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383171,600,404 - 171,810,483 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3171,599,049 - 171,810,950 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh373171,318,194 - 171,528,273 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363172,801,339 - 172,938,566 (-)NCBIBuild 36Build 36hg18NCBI36
Build 343172,801,346 - 172,938,574NCBI
Celera3169,718,435 - 169,928,143 (-)NCBICelera
Cytogenetic Map3q26.31NCBI
HuRef3168,688,221 - 168,898,341 (-)NCBIHuRef
CHM1_13171,281,084 - 171,491,135 (-)NCBICHM1_1
T2T-CHM13v2.03174,384,521 - 174,594,617 (-)NCBIT2T-CHM13v2.0
Pld1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39327,992,636 - 28,187,388 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl327,992,788 - 28,188,692 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38327,938,459 - 28,133,362 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl327,938,695 - 28,133,362 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv37327,837,602 - 28,032,284 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36328,215,231 - 28,324,307 (+)NCBIMGSCv36mm8
Celera327,897,052 - 28,088,894 (+)NCBICelera
Cytogenetic Map3A3NCBI
cM Map311.15NCBI
Pld1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82112,777,820 - 112,975,857 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2112,777,951 - 112,976,245 (+)EnsemblGRCr8
mRatBN7.22110,849,205 - 111,047,304 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2110,893,608 - 111,047,692 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2117,548,080 - 117,700,325 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02115,660,662 - 115,812,852 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02110,374,318 - 110,526,587 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd2112,178,223 - 112,333,624 (+)NCBI
Lyon_Normotensive2112,237,121 - 112,392,529 (+)NCBI
Lyon_Hypertensive2112,101,890 - 112,257,307 (+)NCBI
F344_StmMcwi2111,908,768 - 112,064,085 (+)NCBI
Rnor_6.02113,651,967 - 113,849,403 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2113,652,348 - 113,849,403 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.02133,357,235 - 133,554,180 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42115,306,940 - 115,460,518 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2106,084,707 - 106,238,116 (+)NCBICelera
RGSC_v3.12115,251,901 - 115,405,480 (+)NCBI
Cytogenetic Map2q24NCBI
Pld1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554201,696,751 - 1,892,741 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049554201,697,716 - 1,892,741 (-)NCBIChiLan1.0ChiLan1.0
PLD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22169,481,152 - 169,693,135 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13169,482,578 - 169,696,377 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03168,606,342 - 168,816,383 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13176,790,736 - 176,999,974 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3176,790,753 - 176,961,033 (-)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
Pld1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap13116,354,011 - 116,559,195 (-)NCBImIctTri1.hap1
HiC_Itri_2NW_024405602102,572,478 - 102,777,840 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936593930,637 - 1,046,821 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936593844,634 - 1,049,478 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13110,154,874 - 110,376,294 (-)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.113110,152,268 - 110,376,319 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213119,138,285 - 119,362,303 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap11517,992,949 - 18,204,963 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366606326,423,171 - 26,629,555 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.11517,667,079 - 17,871,452 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1517,706,030 - 17,870,266 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Pld1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473049,665,432 - 49,885,242 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462473049,665,432 - 49,885,184 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl871,973,690 - 72,192,185 (+)Ensembl
Pld1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13126,531,701 - 126,733,956 (-)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in PLD1
2568 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022414244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000024237   ⟹   ENSCAFP00000022501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3435,949,642 - 36,044,906 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000050001   ⟹   ENSCAFP00000039362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3435,921,058 - 36,121,631 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000063505   ⟹   ENSCAFP00000061925
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3435,921,058 - 36,121,631 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845043811   ⟹   ENSCAFP00845034331
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3436,000,274 - 36,205,751 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845044059   ⟹   ENSCAFP00845034526
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3436,000,274 - 36,205,751 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845044301   ⟹   ENSCAFP00845034714
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3436,000,274 - 36,205,751 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845044584   ⟹   ENSCAFP00845034927
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3436,000,274 - 36,205,751 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845044787   ⟹   ENSCAFP00845035101
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3436,000,274 - 36,205,751 (-)Ensembl
RefSeq Acc Id: XM_038446083   ⟹   XP_038302011
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03436,000,267 - 36,164,440 (-)NCBI
RefSeq Acc Id: XM_038446084   ⟹   XP_038302012
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03436,000,267 - 36,164,438 (-)NCBI
RefSeq Acc Id: XM_038446085   ⟹   XP_038302013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03436,000,267 - 36,164,716 (-)NCBI
RefSeq Acc Id: XM_038446086   ⟹   XP_038302014
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03436,000,267 - 36,204,866 (-)NCBI
RefSeq Acc Id: XM_038446087   ⟹   XP_038302015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03436,000,267 - 36,172,372 (-)NCBI
RefSeq Acc Id: XM_038446088   ⟹   XP_038302016
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03436,000,267 - 36,182,817 (-)NCBI
RefSeq Acc Id: XM_038446089   ⟹   XP_038302017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03436,000,267 - 36,205,332 (-)NCBI
RefSeq Acc Id: XM_038462658   ⟹   XP_038318586
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3444,928,877 - 45,093,722 (-)NCBI
RefSeq Acc Id: XM_038462659   ⟹   XP_038318587
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3444,928,877 - 45,133,538 (-)NCBI
RefSeq Acc Id: XM_038462660   ⟹   XP_038318588
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3444,928,877 - 45,111,490 (-)NCBI
RefSeq Acc Id: XM_038462661   ⟹   XP_038318589
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3444,928,877 - 45,093,446 (-)NCBI
RefSeq Acc Id: XM_038462662   ⟹   XP_038318590
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3444,928,877 - 45,133,990 (-)NCBI
RefSeq Acc Id: XM_038462664   ⟹   XP_038318592
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3444,928,877 - 45,093,722 (-)NCBI
RefSeq Acc Id: XM_038462665   ⟹   XP_038318593
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3444,928,877 - 45,101,330 (-)NCBI
RefSeq Acc Id: XM_038520266   ⟹   XP_038376194
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13435,940,863 - 36,104,998 (-)NCBI
RefSeq Acc Id: XM_038520267   ⟹   XP_038376195
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13435,940,863 - 36,145,149 (-)NCBI
RefSeq Acc Id: XM_038520268   ⟹   XP_038376196
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13435,940,863 - 36,123,057 (-)NCBI
RefSeq Acc Id: XM_038520269   ⟹   XP_038376197
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13435,940,863 - 36,104,722 (-)NCBI
RefSeq Acc Id: XM_038520270   ⟹   XP_038376198
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13435,940,863 - 36,145,600 (-)NCBI
RefSeq Acc Id: XM_038520271   ⟹   XP_038376199
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13435,940,863 - 36,104,998 (-)NCBI
RefSeq Acc Id: XM_038520272   ⟹   XP_038376200
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13435,940,863 - 36,112,609 (-)NCBI
RefSeq Acc Id: XM_038583900   ⟹   XP_038439828
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,330,185 (-)NCBI
RefSeq Acc Id: XM_038583901   ⟹   XP_038439829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,370,328 (-)NCBI
RefSeq Acc Id: XM_038583902   ⟹   XP_038439830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,337,851 (-)NCBI
RefSeq Acc Id: XM_038583903   ⟹   XP_038439831
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,348,262 (-)NCBI
RefSeq Acc Id: XM_038583904   ⟹   XP_038439832
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,370,780 (-)NCBI
RefSeq Acc Id: XM_038583905   ⟹   XP_038439833
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,330,185 (-)NCBI
RefSeq Acc Id: XM_038583906   ⟹   XP_038439834
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,329,907 (-)NCBI
RefSeq Acc Id: XM_038583907   ⟹   XP_038439835
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03436,165,953 - 36,329,905 (-)NCBI
RefSeq Acc Id: XM_038648315   ⟹   XP_038504243
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03435,903,822 - 36,068,452 (-)NCBI
RefSeq Acc Id: XM_038648316   ⟹   XP_038504244
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03435,903,822 - 36,068,450 (-)NCBI
RefSeq Acc Id: XM_038648317   ⟹   XP_038504245
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03435,903,822 - 36,068,728 (-)NCBI
RefSeq Acc Id: XM_038648318   ⟹   XP_038504246
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03435,903,822 - 36,108,881 (-)NCBI
RefSeq Acc Id: XM_038648319   ⟹   XP_038504247
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03435,903,822 - 36,076,377 (-)NCBI
RefSeq Acc Id: XM_038648320   ⟹   XP_038504248
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03435,903,822 - 36,086,830 (-)NCBI
RefSeq Acc Id: XM_038648321   ⟹   XP_038504249
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03435,903,822 - 36,109,331 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038302011 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302012 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302013 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302014 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302015 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302016 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302017 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318586 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318587 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318588 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318589 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318590 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318592 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318593 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376194 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376195 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376196 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376197 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376198 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376199 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376200 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439828 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439829 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439830 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439831 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439832 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439833 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439834 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439835 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504243 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504244 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504245 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504246 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504247 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504248 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504249 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00845034331
  ENSCAFP00845034331.1
  ENSCAFP00845034526
  ENSCAFP00845034526.1
  ENSCAFP00845034714.1
  ENSCAFP00845034927.1
  ENSCAFP00845035101.1
Ensembl Acc Id: ENSCAFP00000039362   ⟸   ENSCAFT00000050001
Ensembl Acc Id: ENSCAFP00000061925   ⟸   ENSCAFT00000063505
Ensembl Acc Id: ENSCAFP00000022501   ⟸   ENSCAFT00000024237
RefSeq Acc Id: XP_038376198   ⟸   XM_038520270
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376195   ⟸   XM_038520267
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376196   ⟸   XM_038520268
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376200   ⟸   XM_038520272
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376199   ⟸   XM_038520271
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038376194   ⟸   XM_038520266
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376197   ⟸   XM_038520269
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504249   ⟸   XM_038648321
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504246   ⟸   XM_038648318
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504248   ⟸   XM_038648320
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504247   ⟸   XM_038648319
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504245   ⟸   XM_038648317
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504243   ⟸   XM_038648315
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504244   ⟸   XM_038648316
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038302017   ⟸   XM_038446089
- Peptide Label: isoform X1
- UniProtKB: A0A8I3Q590 (UniProtKB/TrEMBL),   A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302014   ⟸   XM_038446086
- Peptide Label: isoform X1
- UniProtKB: A0A8I3Q590 (UniProtKB/TrEMBL),   A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302016   ⟸   XM_038446088
- Peptide Label: isoform X1
- UniProtKB: A0A8I3Q590 (UniProtKB/TrEMBL),   A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302015   ⟸   XM_038446087
- Peptide Label: isoform X1
- UniProtKB: A0A8I3Q590 (UniProtKB/TrEMBL),   A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302013   ⟸   XM_038446085
- Peptide Label: isoform X1
- UniProtKB: A0A8I3Q590 (UniProtKB/TrEMBL),   A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302011   ⟸   XM_038446083
- Peptide Label: isoform X1
- UniProtKB: A0A8I3Q590 (UniProtKB/TrEMBL),   A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302012   ⟸   XM_038446084
- Peptide Label: isoform X2
- UniProtKB: A0A8I3S502 (UniProtKB/TrEMBL),   A0A8I3PQ57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318590   ⟸   XM_038462662
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318587   ⟸   XM_038462659
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318588   ⟸   XM_038462660
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318593   ⟸   XM_038462665
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318592   ⟸   XM_038462664
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PQ57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318586   ⟸   XM_038462658
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318589   ⟸   XM_038462661
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439832   ⟸   XM_038583904
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439829   ⟸   XM_038583901
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439831   ⟸   XM_038583903
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439830   ⟸   XM_038583902
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439833   ⟸   XM_038583905
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JVB1 (UniProtKB/TrEMBL),   A0A8I3PQ57 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439828   ⟸   XM_038583900
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439834   ⟸   XM_038583906
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JS99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439835   ⟸   XM_038583907
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JVB1 (UniProtKB/TrEMBL),   A0A8I3PQ57 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845034331   ⟸   ENSCAFT00845043811
Ensembl Acc Id: ENSCAFP00845034927   ⟸   ENSCAFT00845044584
Ensembl Acc Id: ENSCAFP00845035101   ⟸   ENSCAFT00845044787
Ensembl Acc Id: ENSCAFP00845034526   ⟸   ENSCAFT00845044059
Ensembl Acc Id: ENSCAFP00845034714   ⟸   ENSCAFT00845044301
Protein Domains
PLD phosphodiesterase   PX

Promoters
RGD ID:13688943
Promoter ID:EPDNEW_C7009
Type:multiple initiation site
Name:PLD1_1
Description:phospholipase D1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13436,080,349 - 36,080,409EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000015246 Ensembl
  ENSCAFG00845024801 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845043811 ENTREZGENE
  ENSCAFT00845043811.1 UniProtKB/TrEMBL
  ENSCAFT00845044059 ENTREZGENE
  ENSCAFT00845044059.1 UniProtKB/TrEMBL
  ENSCAFT00845044301.1 UniProtKB/TrEMBL
  ENSCAFT00845044584.1 UniProtKB/TrEMBL
  ENSCAFT00845044787.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  3.30.1520.10 UniProtKB/TrEMBL
  Endonuclease Chain A UniProtKB/TrEMBL
InterPro PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
  PLD-like_dom UniProtKB/TrEMBL
  PLipase_D/transphosphatidylase UniProtKB/TrEMBL
  PLipase_D_euk UniProtKB/TrEMBL
  PLipase_D_fam UniProtKB/TrEMBL
  PX_dom UniProtKB/TrEMBL
  PX_dom_sf UniProtKB/TrEMBL
NCBI Gene PLD1 ENTREZGENE
PANTHER PHOSPHOLIPASE D1 UniProtKB/TrEMBL
  PTHR18896 UniProtKB/TrEMBL
Pfam PF00169 UniProtKB/TrEMBL
  PF00787 UniProtKB/TrEMBL
  PLDc UniProtKB/TrEMBL
  PLDc_2 UniProtKB/TrEMBL
PIRSF Phospholipase_D_euk UniProtKB/TrEMBL
PROSITE PLD UniProtKB/TrEMBL
  PS50195 UniProtKB/TrEMBL
SMART PLDc UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
  SM00312 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  Phospholipase D/nuclease UniProtKB/TrEMBL
  SSF64268 UniProtKB/TrEMBL
UniProt A0A8C0JS99 ENTREZGENE
  A0A8C0JVB1 ENTREZGENE
  A0A8I3PQ57 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PQJ5_CANLF UniProtKB/TrEMBL
  A0A8I3PTA3_CANLF UniProtKB/TrEMBL
  A0A8I3Q590 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S502 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:44660 ENTREZGENE