FLOT1 (flotillin 1) - Rat Genome Database

Name: FLOT1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: FLOT1 (flotillin 1) Pan paniscus

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Symbol:

FLOT1

Name:

flotillin 1

RGD ID:

11936924

Description:

ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN axonogenesis (ortholog); plasma membrane raft organization (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH megacolon (ortholog); proteasome-associated autoinflammatory syndrome 1 (ortholog); Q fever (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); caveola (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

flotillin-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FLOT1 (flotillin 1)	NCBI	Ortholog
Mus musculus (house mouse):	Flot1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Flot1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Flot1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FLOT1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Flot1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FLOT1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FLOT1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Flot1 (flotillin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	45,288,663 - 45,303,454 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	41,251,507 - 41,266,371 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	30,472,839 - 30,487,809 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	31,342,026 - 31,357,505 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	31,342,033 - 31,357,559 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

megacolon (ISO)

proteasome-associated autoinflammatory syndrome 1 (ISO)

Q fever (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axonogenesis (IEA,ISO)

cellular response to exogenous dsRNA (IEA)

dsRNA transport (IEA)

extracellular matrix disassembly (IEA)

intracellular signal transduction (IEA)

plasma membrane raft assembly (IEA)

plasma membrane raft organization (IEA,ISO)

positive regulation of canonical NF-kappaB signal transduction (IEA)

positive regulation of cell junction assembly (IEA)

positive regulation of cell-cell adhesion mediated by cadherin (IEA)

positive regulation of cytokine production (IEA)

positive regulation of endocytosis (IEA)

positive regulation of heterotypic cell-cell adhesion (IEA)

positive regulation of interferon-beta production (IEA)

positive regulation of myoblast fusion (IEA)

positive regulation of protein phosphorylation (ISO)

positive regulation of skeletal muscle tissue development (IEA)

positive regulation of synaptic transmission, dopaminergic (IEA)

positive regulation of toll-like receptor 3 signaling pathway (IEA)

protein kinase C signaling (IEA)

protein localization to plasma membrane (IEA,ISO)

protein stabilization (IEA)

regulation of neurotransmitter uptake (IEA)

regulation of receptor internalization (IEA)

regulation of Rho protein signal transduction (IEA,ISO)

regulation of toll-like receptor 4 signaling pathway (ISO)

response to endoplasmic reticulum stress (IEA)

Cellular Component

adherens junction (IEA)

apical part of cell (ISO)

apical plasma membrane (ISO)

basolateral plasma membrane (IEA)

caveola (IEA,ISO)

cell-cell contact zone (IEA)

cell-cell junction (IEA)

centriolar satellite (IEA)

COP9 signalosome (IEA,ISO)

cortical actin cytoskeleton (IEA)

cytoplasmic vesicle (IEA)

dopaminergic synapse (IEA,ISO)

early endosome (IEA)

endosome (IEA)

external side of plasma membrane (IEA)

flotillin complex (IEA,ISO)

GABA-ergic synapse (ISO)

glutamatergic synapse (ISO)

lamellipodium (IEA)

membrane (IEA)

membrane raft (IEA)

microtubule organizing center (IEA)

plasma membrane (IEA)

plasma membrane raft (IEA)

presynapse (ISO)

presynaptic active zone (ISO)

sarcolemma (IEA)

synapse (ISO)

uropod (IEA)

Molecular Function

ionotropic glutamate receptor binding (ISO)

protease binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

FLOT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	45,288,663 - 45,303,454 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	41,251,507 - 41,266,371 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	30,472,839 - 30,487,809 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	31,342,026 - 31,357,505 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	31,342,033 - 31,357,559 (-)	Ensembl	panpan1.1		panPan2

FLOT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	30,727,709 - 30,742,687 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	30,727,709 - 30,742,732 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	30,695,486 - 30,710,464 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	30,803,490 - 30,818,432 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	30,803,491 - 30,818,432	NCBI
Celera	6	32,293,643 - 32,308,593 (-)	NCBI		Celera
Cytogenetic Map	6	p21.33	NCBI
HuRef	6	30,495,459 - 30,510,242 (-)	NCBI		HuRef
CHM1_1	6	30,697,639 - 30,712,561 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	30,591,911 - 30,606,890 (-)	NCBI		T2T-CHM13v2.0

Flot1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	36,134,243 - 36,143,674 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	36,134,122 - 36,143,683 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	35,823,320 - 35,832,789 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	35,823,230 - 35,832,791 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	35,960,302 - 35,969,732 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	35,431,410 - 35,440,840 (+)	NCBI		MGSCv36	mm8
Celera	17	39,333,424 - 39,342,847 (+)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	18.7	NCBI

Flot1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	2,922,662 - 2,932,906 (-)	NCBI		GRCr8
mRatBN7.2	20	2,917,864 - 2,927,993 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	2,917,137 - 2,927,978 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	2,969,295 - 2,979,369 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	2,974,276 - 2,984,354 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	3,000,638 - 3,010,732 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	3,427,890 - 3,438,418 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	3,427,880 - 3,438,396 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	5,524,708 - 5,535,232 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	3,065,792 - 3,076,166 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	3,066,008 - 3,169,167 (-)	NCBI
Celera	20	343,778 - 353,887 (-)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

Flot1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955583	713,560 - 729,924 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955583	717,246 - 729,924 (-)	NCBI	ChiLan1.0	ChiLan1.0

FLOT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	517,941 - 528,677 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	516,032 - 528,637 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	655,207 - 665,931 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	661,078 - 671,802 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	656,880 - 671,882 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	519,006 - 529,724 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	587,853 - 598,598 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	656,440 - 667,178 (-)	NCBI		UU_Cfam_GSD_1.0

Flot1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	34,021,923 - 34,035,815 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936837	380,288 - 401,071 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936837	387,012 - 401,076 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FLOT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	23,253,162 - 23,265,106 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	23,253,157 - 23,265,165 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	26,975,124 - 26,987,109 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FLOT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	41,714,354 - 41,725,820 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	41,714,402 - 41,725,397 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	30,425,408 - 30,437,271 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Flot1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	24,992,929 - 25,003,759 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	24,992,961 - 25,000,463 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003807347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024929086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000039278 ⟹ ENSPPAP00000016581

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	6	31,342,033 - 31,357,559 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000039305 ⟹ ENSPPAP00000016608

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	6	31,342,413 - 31,356,844 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000039306 ⟹ ENSPPAP00000016609

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	6	31,342,413 - 31,356,844 (-)	Ensembl

RefSeq Acc Id:

XM_003807347 ⟹ XP_003807395

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	5	45,288,663 - 45,303,454 (-)	NCBI
NHGRI_mPanPan1	6	41,251,507 - 41,266,371 (-)	NCBI
Mhudiblu_PPA_v0	6	30,472,849 - 30,487,648 (-)	NCBI
PanPan1.1	6	31,342,121 - 31,357,505 (-)	NCBI

Sequence:

show sequence

TGTGGCCCTCCCCGGGCTAACCAGGCAGCCCGGCTGGGCCCGAGAGCCAGCGGGCGGGCGGGCT
GCGGACTCTAGCGGGGCCTGCCGGGAAAGGGGCGGGCCGAGCGCACTGGGCCGAGGCGGGGCGA
AGTGGGGGTGCTTAGTCCGTTGCGGGGGGCGGGGTCGCGTCTCCGCAGCAACAGGGTGCGGCCG
GGTGGGGAACGCGGGAGCGGGGCCAGCTCCCAGGAAAGCTGGTCTGCGAGCGGCCCCTGCCCGG
CTCCCAGGTCCCTGCGCGACCCCGCCCTTCCCGAGACCCCAGCCGGGCTGCCGCCCGCGTCCCG
GAAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGT
TCTGCCGAAGCCCCCCAGTCATGGTGGCTGGAGGGCGTGTCTTTGTCCTGCCCTGCATCCAACA
GATCCAGAGGATCTCTCTCAACACACTGACCCTCAATGTCAAGAGTGAAAAGGTTTACACTCGC
CATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAGGTAAAAATCCAGGGGCAGAACAAGGAGA
TGTTGGCGGCCGCCTGTCAGATGTTCCTGGGGAAGACGGAGGCTGAGATTGCCCACATTGCCCT
GGAGACGTTAGAGGGCCACCAGAGGGCCATCATGGCCCACATGACTGTGGAGGAGATCTATAAG
GACAGGCAGAAATTCTCAGAACAGGTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATGGGCA
TCAGTGTGGTTAGCTACACTCTGAAGGACATTCACGATGACCAGGACTATTTGCACTCTTTGGG
GAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGAT
GCTGGGATCCGGGAAGCTAAAGCCAAGCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGATCG
AGATGGCCAAGGCACAGAGAGATTACGAACTGAAGAAGGCCGCCTATGACATCGAGGTCAACAC
CCGCCGAGCACAGGCTGACCTGGCCTATCAGCTTCAGGTGGCCAAGACTAAGCAGCAGATTGAG
GAGCAGCGGGTGCAGGTGCAGGTGGTGGAGCGGGCCCAGCAGGTGGCAGTGCAGGAGCAGGAGA
TCGCCCGGCGGGAGAAGGAGCTGGAGGCCCGGGTGCGGAAGCCAGCGGAAGCTGAGCGCTACAA
GCTGGAGCGCCTAGCCGAGGCAGAGAAGTCCCAACTAATTATGCAGGCGGAGGCAGAAGCCGAG
TCTGTGCGGATGCGTGGGGAAGCTGAGGCCTTTGCCATAGGGGCCCGAGCCCGAGCCGAGGCTG
AGCAGATGGCCAAGAAGGCAGAAGCCTTCCAGCTGTACCAAGAGGCTGCTCAGCTGGACATGCT
GCTAGAGAAGCTGCCCCAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTTCAGCCAATAAGATC
ACACTGGTGTCCAGCGGCAGTGGGACCATGGGGGCAGCCAAAGTGACTGGGGAAGTACTGGACA
TTCTAACTCGCCTGCCAGAGAGTGTGGAAAGACTCACAGGCGTGAGCATCTCCCAGGTGAATCA
CAAGCCTTTGAGAACAGCCTGAGCCTTCAGCCCTCACAGATGCCCAGCCTCATAGCTGAAGTTG
CCTGAATGATCCTCCTGTTGCATGTAACCCACTGGCCTCCCTGAGCATGTCCATTGACAGTGAG
GTCCCACCCCTCATCTCTCCTTGCCAAATAGTTTGTGCCTTGTCTTGAAGGGGGTTGGTCCCCT
TGCCAACCTCACACTGCTATGATTGCCAACTCCAGCGGTCCCATGTCAGCCTTCTGATGATCCC
ACTCCACCCCACCTCAACTTATTTAACTTCCTAATTAAATCAGACTGTTTGAGCCTGT

hide sequence

RefSeq Acc Id:

XM_024929086 ⟹ XP_024784854

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	5	45,288,663 - 45,303,454 (-)	NCBI
NHGRI_mPanPan1	6	41,251,507 - 41,266,356 (-)	NCBI
Mhudiblu_PPA_v0	6	30,472,839 - 30,487,809 (-)	NCBI
PanPan1.1	6	31,342,121 - 31,357,505 (-)	NCBI

Sequence:

show sequence

TGTGGCCCTCCCCGGGCTAACCAGGCAGCCCGGCTGGGCCCGAGAGCCAGCGGGCGGGCGGGCT
GCGGACTCTAGCGGGGCCTGCCGGGAAAGGGGCGGGCCGAGCGCACTGGGCCGAGGCGGGGCGA
AGTGGGGGTGCTTAGTCCGTTGCGGGGGGCGGGGTCGCGTCTCCGCAGCAACAGGGTGCGGCCG
GGTGGGGAACGCGGGAGCGGGGCCAGCTCCCAGGAAAGCTGGTCTGCGAGCGGCCCCTGCCCGG
CTCCCAGGTCCCTGCGCGACCCCGCCCTTCCCGAGACCCCAGCCGGGCTGCCGCCCGCGTCCCG
GAAGCTCCAGCCTGAACCATGTTTTTCACTTGTGGCCCAAATGAGGCCATGGTGGTCTCCGGGT
TCTGCCGAAGCCCCCCAGTCATGGTGGCTGGAGGGCGTGTCTTTGTCCTGCCCTGCATCCAACA
GATCCAGAGGATCTCTCTCAACACACTGACCCTCAATGTCAAGAGTGAAAAGGTTTACACTCGC
CATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAGGAGATCTATAAGGACAGGCAGAAATTCT
CAGAACAGGTTTTCAAAGTGGCCTCCTCAGACCTGGTCAACATGGGCATCAGTGTGGTTAGCTA
CACTCTGAAGGACATTCACGATGACCAGGACTATTTGCACTCTTTGGGGAAGGCTCGAACAGCT
CAAGTCCAAAAAGATGCACGGATTGGAGAAGCAGAGGCCAAGAGAGATGCTGGGATCCGGGAAG
CTAAAGCCAAGCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGATCGAGATGGCCAAGGCACA
GAGAGATTACGAACTGAAGAAGGCCGCCTATGACATCGAGGTCAACACCCGCCGAGCACAGGCT
GACCTGGCCTATCAGCTTCAGGTGGCCAAGACTAAGCAGCAGATTGAGGAGCAGCGGGTGCAGG
TGCAGGTGGTGGAGCGGGCCCAGCAGGTGGCAGTGCAGGAGCAGGAGATCGCCCGGCGGGAGAA
GGAGCTGGAGGCCCGGGTGCGGAAGCCAGCGGAAGCTGAGCGCTACAAGCTGGAGCGCCTAGCC
GAGGCAGAGAAGTCCCAACTAATTATGCAGGCGGAGGCAGAAGCCGAGTCTGTGCGGATGCGTG
GGGAAGCTGAGGCCTTTGCCATAGGGGCCCGAGCCCGAGCCGAGGCTGAGCAGATGGCCAAGAA
GGCAGAAGCCTTCCAGCTGTACCAAGAGGCTGCTCAGCTGGACATGCTGCTAGAGAAGCTGCCC
CAGGTGGCAGAGGAGATCAGTGGTCCCTTGACTTCAGCCAATAAGATCACACTGGTGTCCAGCG
GCAGTGGGACCATGGGGGCAGCCAAAGTGACTGGGGAAGTACTGGACATTCTAACTCGCCTGCC
AGAGAGTGTGGAAAGACTCACAGGCGTGAGCATCTCCCAGGTGAATCACAAGCCTTTGAGAACA
GCCTGAGCCTTCAGCCCTCACAGATGCCCAGCCTCATAGCTGAAGTTGCCTGAATGATCCTCCT
GTTGCATGTAACCCACTGGCCTCCCTGAGCATGTCCATTGACAGTGAGGTCCCACCCCTCATCT
CTCCTTGCCAAATAGTTTGTGCCTTGTCTTGAAGGGGGTTGGTCCCCTTGCCAACCTCACACTG
CTATGATTGCCAACTCCAGCGGTCCCATGTCAGCCTTCTGATGATCCCACTCCACCCCACCTCA
ACTTATTTAACTTCCTAATTAAATCAGACTGTTTGAGCCTGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_003807395	(Get FASTA)	NCBI Sequence Viewer
	XP_024784854	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000016581
	ENSPPAP00000016581.1
	ENSPPAP00000016608
	ENSPPAP00000016608.1
	ENSPPAP00000016609.1

RefSeq Acc Id:	XP_003807395 ⟸ XM_003807347
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9AGW3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFFTCGPNEAMVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPIS VTGIAQVKIQGQNKEMLAAACQMFLGKTEAEIAHIALETLEGHQRAIMAHMTVEEIYKDRQKFS EQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQKDARIGEAEAKRDAGIREA KAKQEKVSAQYLSEIEMAKAQRDYELKKAAYDIEVNTRRAQADLAYQLQVAKTKQQIEEQRVQV QVVERAQQVAVQEQEIARREKELEARVRKPAEAERYKLERLAEAEKSQLIMQAEAEAESVRMRG EAEAFAIGARARAEAEQMAKKAEAFQLYQEAAQLDMLLEKLPQVAEEISGPLTSANKITLVSSG SGTMGAAKVTGEVLDILTRLPESVERLTGVSISQVNHKPLRTA hide sequence

RefSeq Acc Id:	XP_024784854 ⟸ XM_024929086
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9AHV4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFFTCGPNEAMVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPIS VTGIAQEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQKDA RIGEAEAKRDAGIREAKAKQEKVSAQYLSEIEMAKAQRDYELKKAAYDIEVNTRRAQADLAYQL QVAKTKQQIEEQRVQVQVVERAQQVAVQEQEIARREKELEARVRKPAEAERYKLERLAEAEKSQ LIMQAEAEAESVRMRGEAEAFAIGARARAEAEQMAKKAEAFQLYQEAAQLDMLLEKLPQVAEEI SGPLTSANKITLVSSGSGTMGAAKVTGEVLDILTRLPESVERLTGVSISQVNHKPLRTA hide sequence

Ensembl Acc Id:

ENSPPAP00000016609 ⟸ ENSPPAT00000039306

Ensembl Acc Id:

ENSPPAP00000016608 ⟸ ENSPPAT00000039305

Ensembl Acc Id:

ENSPPAP00000016581 ⟸ ENSPPAT00000039278

Protein Domains

Band

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000031390	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000039278.1	UniProtKB/TrEMBL
	ENSPPAT00000039305.1	UniProtKB/TrEMBL
	ENSPPAT00000039306.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.479.30	UniProtKB/TrEMBL
InterPro	Band_7	UniProtKB/TrEMBL
	Band_7/SPFH_dom_sf	UniProtKB/TrEMBL
	Flotillin_C	UniProtKB/TrEMBL
	Flotillin_fam	UniProtKB/TrEMBL
KEGG Report	pps:100970836	UniProtKB/TrEMBL
NCBI Gene	FLOT1	ENTREZGENE
PANTHER	FLOTILLIN-1	UniProtKB/TrEMBL
	PTHR13806	UniProtKB/TrEMBL
Pfam	Band_7	UniProtKB/TrEMBL
	Flot	UniProtKB/TrEMBL
SMART	PHB	UniProtKB/TrEMBL
Superfamily-SCOP	SSF117892	UniProtKB/TrEMBL
UniProt	A0A2R9AGW3	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9AHV4	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9ANS6_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD