FCGR1A (Fc gamma receptor Ia) - Rat Genome Database

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Gene: FCGR1A (Fc gamma receptor Ia) Pan paniscus
Analyze
Symbol: FCGR1A
Name: Fc gamma receptor Ia
RGD ID: 11673348
Description: ENCODES a protein that exhibits IgG binding (ortholog); IgG receptor activity (ortholog); leukotriene receptor binding (ortholog); INVOLVED IN antibody-dependent cellular cytotoxicity (ortholog); antigen processing and presentation of exogenous antigen (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); calcinosis (ortholog); Experimental Arthritis (ortholog); FOUND IN external side of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Fc fragment of IgG receptor Ia; high affinity immunoglobulin gamma Fc receptor I; LOC100984157; putative high affinity immunoglobulin gamma Fc receptor IC
RGD Orthologs
Human
Mouse
Rat
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21100,047,861 - 100,056,851 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1199,802,796 - 99,811,784 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01125,127,073 - 125,136,911 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11128,805,436 - 128,815,227 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1128,805,484 - 128,814,220 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
FCGR1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21100,047,861 - 100,056,851 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1199,802,796 - 99,811,784 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01125,127,073 - 125,136,911 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11128,805,436 - 128,815,227 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1128,805,484 - 128,814,220 (+)Ensemblpanpan1.1panPan2
FCGR1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381149,782,694 - 149,800,609 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1149,782,671 - 149,791,675 (+)EnsemblGRCh38hg38GRCh38
GRCh371149,754,250 - 149,772,165 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361148,020,912 - 148,030,698 (+)NCBINCBI36Build 36hg18NCBI36
Build 341146,567,360 - 146,577,146NCBI
Cytogenetic Map1q21.2NCBI
CHM1_11151,150,820 - 151,160,644 (+)NCBICHM1_1
T2T-CHM13v2.01148,906,840 - 148,924,747 (+)NCBIT2T-CHM13v2.0
Fcgr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39396,190,225 - 96,201,285 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl396,190,225 - 96,201,285 (-)EnsemblGRCm39 Ensembl
GRCm38396,282,909 - 96,293,969 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl396,282,909 - 96,293,969 (-)EnsemblGRCm38mm10GRCm38
MGSCv37396,086,832 - 96,097,892 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36396,368,314 - 96,379,374 (-)NCBIMGSCv36mm8
Celera397,711,230 - 97,722,291 (-)NCBICelera
Cytogenetic Map3F2.1NCBI
cM Map341.72NCBI
Fcgr1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82186,539,941 - 186,548,941 (-)NCBIGRCr8
mRatBN7.22183,851,075 - 183,860,077 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2183,851,077 - 183,859,994 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2191,514,627 - 191,523,542 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02189,313,778 - 189,322,712 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02184,147,164 - 184,156,079 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02198,430,536 - 198,439,453 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,430,530 - 198,458,041 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02217,916,295 - 217,925,212 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42191,095,026 - 191,103,942 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12191,057,780 - 191,066,696 (-)NCBI
Celera2176,378,627 - 176,387,543 (-)NCBICelera
Cytogenetic Map2q34NCBI
FCGR1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11759,073,139 - 59,102,023 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1759,092,933 - 59,102,015 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1758,541,116 - 58,550,066 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01760,070,040 - 60,098,863 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1760,089,692 - 60,098,850 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11758,939,430 - 58,948,415 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01759,023,178 - 59,032,132 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01759,749,960 - 59,759,005 (+)NCBIUU_Cfam_GSD_1.0
Fcgr1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505821,085,119 - 21,114,589 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936580115,450 - 145,785 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936580115,552 - 144,970 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FCGR1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl499,233,611 - 99,242,586 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1499,233,632 - 99,242,531 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24108,773,630 - 108,782,529 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FCGR1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366603813,502,010 - 13,510,802 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Sequence


Ensembl Acc Id: ENSPPAT00000056877   ⟹   ENSPPAP00000033996
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1128,805,484 - 128,814,220 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000056880   ⟹   ENSPPAP00000033999
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1128,805,484 - 128,814,220 (+)Ensembl
RefSeq Acc Id: XM_003808794   ⟹   XP_003808842
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21100,047,861 - 100,056,834 (-)NCBI
NHGRI_mPanPan1199,802,796 - 99,811,769 (-)NCBI
Mhudiblu_PPA_v01125,127,073 - 125,136,911 (+)NCBI
PanPan1.11128,805,436 - 128,815,219 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008960896   ⟹   XP_008959144
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21100,047,861 - 100,056,851 (-)NCBI
NHGRI_mPanPan1199,802,796 - 99,811,784 (-)NCBI
Mhudiblu_PPA_v01125,127,129 - 125,136,070 (+)NCBI
PanPan1.11128,805,436 - 128,814,378 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003808842 (Get FASTA)   NCBI Sequence Viewer  
  XP_008959144 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000033996
  ENSPPAP00000033996.1
  ENSPPAP00000033999.1
RefSeq Acc Id: XP_003808842   ⟸   XM_003808794
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BX04 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008959144   ⟸   XM_008960896
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BX04 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000033996   ⟸   ENSPPAT00000056877
Ensembl Acc Id: ENSPPAP00000033999   ⟸   ENSPPAT00000056880
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039866 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000056877.1 UniProtKB/TrEMBL
  ENSPPAT00000056880.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_Fc_receptor UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
NCBI Gene LOC100984157 ENTREZGENE
PANTHER HIGH AFFINITY IMMUNOGLOBULIN GAMMA FC RECEPTOR I-RELATED UniProtKB/TrEMBL
  IMMUNOGLOBULIN FC RECEPTOR UniProtKB/TrEMBL
Pfam Ig_2 UniProtKB/TrEMBL
  Ig_3 UniProtKB/TrEMBL
  PF00047 UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A2R9BX04 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C625_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-02 FCGR1A  Fc gamma receptor Ia  FCGR1A  Fc fragment of IgG receptor Ia  Symbol and/or name change 5135510 APPROVED
2020-07-01 FCGR1A  Fc fragment of IgG receptor Ia  LOC100984157  high affinity immunoglobulin gamma Fc receptor I  Symbol and/or name change 5135510 APPROVED