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EXPERIMENTAL CONDITION - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:controlled visible light condition
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Accession:XCO:0000181 term browser browse the term
Definition:Condition in which the presence or absence of visible light, that is, electromagnetic radiation with wavelengths between approximately 390 (violet) and 770 (red) nanometers, capable of stimulating the subjective sensation of sight, is constrained.


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controlled exposure to ambient light term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp349 Blood pressure QTL 349 IDA RGD PMID:11015589 RGD:69700 NCBI chr18:46,718,935...59,796,478 JBrowse link
Q Bp351 Blood pressure QTL 351 IDA RGD PMID:11015589 RGD:69700 NCBI chr18:46,718,935...59,796,478 JBrowse link
Q Bp352 Blood pressure QTL 352 IDA RGD PMID:11015589 RGD:69700 NCBI chr18:46,718,935...59,796,478 JBrowse link
Q Bp353 Blood pressure QTL 353 IDA RGD PMID:24023717 RGD:7327193 NCBI chr18:59,796,478...83,828,827 JBrowse link
Q Bp354 Blood pressure QTL 354 IDA RGD PMID:11015589 RGD:69700 NCBI chr18:59,796,478...83,828,827 JBrowse link
Q Bp355 Blood pressure QTL 355 IDA RGD PMID:11015589 RGD:69700 NCBI chr18:11,944,544...59,796,478 JBrowse link
Q Hrtrt3 Heart rate QTL 3 IDA RGD PMID:14532335 RGD:727992 NCBI chr 2:29,971,593...51,729,300 JBrowse link
Q Stresp4 Stress response QTL 4 IDA RGD PMID:15013833 RGD:737981 NCBI chr 4:50,119,848...146,803,430 JBrowse link
Q Stresp5 Stress response QTL 5 IDA RGD PMID:15013833 RGD:737981 NCBI chr10:42,045,676...104,670,812 JBrowse link
controlled exposure to darkness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp350 Blood pressure QTL 350 IDA RGD PMID:11015589 RGD:69700 NCBI chr18:31,359,530...59,796,478 JBrowse link
Q Hrtrt3 Heart rate QTL 3 IDA RGD PMID:14532335 RGD:727992 NCBI chr 2:29,971,593...51,729,300 JBrowse link
visible light stimulus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr22 Anxiety related response QTL 22 IDA RGD PMID:11932246 RGD:625384 NCBI chr10:61,345,276...98,211,570 JBrowse link
Q Anxrr54 Anxiety related response QTL 54 IDA RGD PMID:27044679 RGD:11566049 NCBI chr 4:114,627,026...159,627,026 JBrowse link
Q Anxrr56 Anxiety related response QTL 56 IDA RGD PMID:27044679 RGD:11566049 NCBI chr 4:85,253,748...150,276,390 JBrowse link
Q Anxrr57 Anxiety related response QTL 57 IDA RGD PMID:27044679 RGD:11566049 NCBI chr 4:147,278,504...167,139,601 JBrowse link

Related Phenotype Data for Term "controlled visible light condition" (XCO:0000181)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

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  experimental condition 2376
    controlled visible light condition 14
      controlled exposure to darkness 2
      controlled visible light exposure + 13
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