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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:Wnt signaling, the planar cell polarity pathway
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Accession:PW:0000200 term browser browse the term
Definition:The planar cell polarity (PCP) Wnt signaling pathway plays an essential role in morphogenesis through the regulation of tissues patterning.
Synonyms:related_synonym: PCP Wnt signaling pathway;   Wnt signaling pathway, planar cell polarity pathway

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Wnt signaling, the planar cell polarity pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 ISO RGD PMID:17226800 RGD:2293492 Ensembl chr22:45,428,159...45,604,453 JBrowse link
G DAAM1 dishevelled associated activator of morphogenesis 1 ISO RGD PMID:17226800 RGD:2293492 NCBI chr14:39,792,952...39,975,754
Ensembl chr14:58,133,462...58,241,353
JBrowse link
G DVL1 dishevelled segment polarity protein 1 ISO RGD PMID:15608632 RGD:1581694 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008
JBrowse link
G DVL2 dishevelled segment polarity protein 2 ISO RGD PMID:17226800 RGD:2293492 NCBI chr17:7,255,241...7,264,452
Ensembl chr17:7,242,493...7,251,571
JBrowse link
G FZD3 frizzled class receptor 3 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 8:27,773,699...27,853,980
Ensembl chr 8:24,973,644...25,042,115
JBrowse link
G FZD6 frizzled class receptor 6 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 ISO RGD PMID:17226800 RGD:2293492 NCBI chr12:46,127,673...46,262,333
Ensembl chr12:47,100,393...47,126,102
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) ISO RGD PMID:17226800 RGD:2293492 NCBI chr 6:42,668,077...42,753,547
Ensembl chr 6:43,962,560...44,051,146
JBrowse link
G RAC1 Rac family small GTPase 1 ISO RGD PMID:15608632 RGD:1581694 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:15637299 RGD:2302030 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G SCRIB scribble planar cell polarity protein ISO RGD PMID:17226800 RGD:2293492 NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 ISO RGD PMID:17226800 RGD:2293492 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
G WNT7B Wnt family member 7B ISO RGD PMID:15608632 PMID:18177422 RGD:1581694 RGD:2292645 Ensembl chr22:44,988,647...45,044,841 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 4069
    signaling pathway 1942
      signaling pathway pertinent to development 459
        Wnt signaling pathway 113
          Wnt signaling, non-canonical pathway 42
            Wnt signaling, the planar cell polarity pathway 13
              altered Wnt signaling, the planar cell polarity pathway 0
Path 2
Term Annotations click to browse term
  pathway 4069
    signaling pathway 1942
      glycoconjugated protein signaling pathway 335
        glycoprotein signaling pathway 215
          Wnt signaling pathway 113
            Wnt signaling, non-canonical pathway 42
              Wnt signaling, the planar cell polarity pathway 13
                altered Wnt signaling, the planar cell polarity pathway 0
paths to the root