PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: sarcosinemia pathway
Accession: PW:0001670
browse the term
Definition: A rare autosomal recessive metabolic disorder due to mutations in sarcosine dehydrogenase resulting in alterations of sarcosine metabolism.
Synonyms: exact_synonym: SARCOS pathway; SARD deficiency pathway; SARDH deficiency pathway; SARDHD pathway; hypersarcosinemia pathway; sarcosine dehydrogenase complex deficiency pathway; sarcosinemia disease pathway
related_synonym: SMP:00244
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AGXT
alanine--glyoxylate aminotransferase
ISO
SMPDB
SMP:00244
NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837
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ALAS1
5'-aminolevulinate synthase 1
ISO
SMPDB
SMP:00244
NCBI chr 3:52,140,423...52,156,656
Ensembl chr 3:53,369,522...53,385,361
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ALDH2
aldehyde dehydrogenase 2 family member
ISO
SMPDB
SMP:00244
NCBI chr12:109,343,020...109,385,060
Ensembl chr12:112,734,243...112,776,471
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AMT
aminomethyltransferase
ISO
SMPDB
SMP:00244
NCBI chr 3:49,344,590...49,350,383
Ensembl chr 3:50,589,193...50,594,968
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BHMT
betaine--homocysteine S-methyltransferase
ISO
SMPDB
SMP:00244
NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993
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CBS
cystathionine beta-synthase
ISO
SMPDB
SMP:00244
NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
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CTH
cystathionine gamma-lyase
ISO
SMPDB
SMP:00244
NCBI chr 1:69,646,608...69,674,301
Ensembl chr 1:71,629,333...71,677,666
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DLD
dihydrolipoamide dehydrogenase
ISO
SMPDB
SMP:00244
NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629
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DMGDH
dimethylglycine dehydrogenase
ISO
SMPDB
SMP:00244
NCBI chr 5:36,241,341...36,313,995
Ensembl chr 5:36,732,005...36,805,883
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GAMT
guanidinoacetate N-methyltransferase
ISO
SMPDB
SMP:00244
Ensembl chr19:1,371,312...1,375,461
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GARS1
glycyl-tRNA synthetase 1
ISO
SMPDB
SMP:00244
NCBI chr 7:31,208,351...31,247,841
Ensembl chr 7:31,329,456...31,368,582
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GATM
glycine amidinotransferase
ISO
SMPDB
SMP:00244
NCBI chr15:24,309,045...24,326,673
Ensembl chr15:42,639,597...42,657,209
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GCAT
glycine C-acetyltransferase
ISO
SMPDB
SMP:00244
NCBI chr22:18,722,886...18,731,963
Ensembl chr22:36,554,067...36,563,429
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GLDC
glycine decarboxylase
ISO
SMPDB
SMP:00244
NCBI chr 9:6,347,381...6,456,042
Ensembl chr 9:6,527,242...6,635,779
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GLYCTK
glycerate kinase
ISO
SMPDB
SMP:00244
NCBI chr 3:52,230,128...52,237,561
Ensembl chr 3:53,458,563...53,466,702
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GNMT
glycine N-methyltransferase
ISO
SMPDB
SMP:00244
NCBI chr 6:42,550,631...42,554,385
Ensembl chr 6:43,846,560...43,849,679
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LOC100993185
putative phosphoserine phosphatase-like protein
ISO
SMPDB
SMP:00244
NCBI chr 7:56,351,434...56,376,714
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MAOA
monoamine oxidase A
ISO
SMPDB
SMP:00244
NCBI chr X:36,106,680...36,197,907
Ensembl chr X:43,931,044...44,022,199
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PHGDH
phosphoglycerate dehydrogenase
ISO
SMPDB
SMP:00244
NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462
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PSAT1
phosphoserine aminotransferase 1
ISO
SMPDB
SMP:00244
NCBI chr 9:46,517,253...46,550,018
Ensembl chr 9:77,147,493...77,180,439
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SARDH
sarcosine dehydrogenase
ISO
SMPDB
SMP:00244
NCBI chr 9:104,786,774...104,864,480
Ensembl chr 9:133,398,806...133,473,642
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SARS1
seryl-tRNA synthetase 1
ISO
SMPDB
SMP:00244
NCBI chr 1:111,590,850...111,615,068
Ensembl chr 1:110,755,054...110,779,704
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SDS
serine dehydratase
ISO
SMPDB
SMP:00244
NCBI chr12:110,995,164...111,006,668
Ensembl chr12:114,377,650...114,388,839
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SHMT1
serine hydroxymethyltransferase 1
ISO
SMPDB
SMP:00244
NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220
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SHMT2
serine hydroxymethyltransferase 2
ISO
SMPDB
SMP:00244
NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138
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SRR
serine racemase
ISO
SMPDB
SMP:00244
NCBI chr17:2,294,440...2,316,244
Ensembl chr17:2,182,839...2,200,704
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