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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:absent Paneth cells
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Accession:MP:0014076 term browser browse the term
Definition:absence or loss of the large secretory cells containing coarse granules normally confined to the base of the crypts of Lieberkuhn in the small intestine
Synonyms:exact_synonym: absent Davidoff cells;   absent Paneth granule cells


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absent Paneth cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 IAGP MGI PMID:22354172 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:17980593 PMID:22354172 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:30952657 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 IAGP MGI PMID:22354172 NCBI chr10:115,286,219...115,423,685
Ensembl chr10:115,286,216...115,423,685 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box IAGP MGI PMID:22393260 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
G Xbp1 X-box binding protein 1 IAGP MGI PMID:18775308 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16738
    endocrine/exocrine gland phenotype 3409
      abnormal gland morphology 3171
        abnormal exocrine gland morphology 1092
          abnormal crypts of Lieberkuhn morphology 206
            abnormal small intestine crypts of Lieberkuhn morphology 93
              abnormal Paneth cell morphology 46
                abnormal Paneth cell number 31
                  decreased Paneth cell number 23
                    absent Paneth cells 6
Path 2
Term Annotations click to browse term
  mammalian phenotype 16738
    digestive/alimentary phenotype 1889
      abnormal digestive system morphology 1497
        abnormal intestine morphology 673
          abnormal intestinal mucosa morphology 262
            abnormal crypts of Lieberkuhn morphology 206
              abnormal small intestine crypts of Lieberkuhn morphology 93
                abnormal Paneth cell morphology 46
                  abnormal Paneth cell number 31
                    decreased Paneth cell number 23
                      absent Paneth cells 6
paths to the root