Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:thymidine biosynthetic process
go back to main search page
Accession:GO:0046105 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of thymidine, deoxyribosylthymine thymine 2-deoxyriboside, a deoxynucleoside very widely distributed but occurring almost entirely as phosphoric esters in deoxynucleotides and deoxyribonucleic acid, DNA.
Synonyms:exact_synonym: deoxyribosylthymine biosynthesis;   deoxyribosylthymine biosynthetic process;   thymidine anabolism;   thymidine biosynthesis;   thymidine formation;   thymidine synthesis


show annotations for term's descendants           Sort by:
thymidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHFR2 dihydrofolate reductase 2 involved_in IDA (PMID:21876188) UniProt PMID:21876188 NCBI chr 3:94,057,922...94,063,320
Ensembl chr 3:94,047,836...94,063,389 		JBrowse link
G DTYMK deoxythymidylate kinase involved_in TAS
IDA		 (PMID:8024690)
(PMID:12614151)		 GO_Central
UniProt		 PMID:8024690 PMID:12614151 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944 		JBrowse link
G TK1 thymidine kinase 1 involved_in IDA (PMID:14697231) UniProt PMID:14697231 NCBI chr17:78,174,079...78,187,204
Ensembl chr17:78,174,091...78,187,233 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    metabolic process 12467
      small molecule metabolic process 2010
        nucleobase-containing small molecule metabolic process 744
          nucleoside metabolic process 70
            pyrimidine nucleoside metabolic process 27
              pyrimidine deoxyribonucleoside metabolic process 6
                thymidine metabolic process 5
                  thymidine biosynthetic process 3
Path 2
Term Annotations click to browse term
  biological_process 19669
    metabolic process 12467
      organic substance metabolic process 11970
        organic substance biosynthetic process 9228
          organic cyclic compound biosynthetic process 4419
            nucleobase-containing compound biosynthetic process 4145
              nucleobase-containing small molecule biosynthetic process 20
                nucleoside biosynthetic process 20
                  deoxyribonucleoside biosynthetic process 3
                    pyrimidine deoxyribonucleoside biosynthetic process 3
                      thymidine biosynthetic process 3
paths to the root