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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine deoxyribonucleoside metabolic process
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Accession:GO:0046125 term browser browse the term
Definition:The chemical reactions and pathways involving any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).
Synonyms:exact_synonym: pyrimidine deoxyribonucleoside metabolism


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deoxycytidine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase IDA
IMP
RGD PMID:8305745, PMID:7686601 RGD:2300395, RGD:2300398 NCBI chr14:20,935,442...20,952,939
Ensembl chr14:20,935,369...20,953,095
JBrowse link
G Tk2 thymidine kinase 2 IDA RGD PMID:21444706 RGD:5134349 NCBI chr19:917,203...939,236
Ensembl chr19:917,203...939,221
JBrowse link
thymidine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase ISO
IEA
ISS
(PMID:1512248)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:1512248 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
thymidine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tk1 thymidine kinase 1 IDA
IBA
phosphorylation
PMID:21873635
RGD
GO_Central
PMID:6642140, PMID:21873635 RGD:2317232, RGD:13792537 NCBI chr10:106,817,556...106,828,888
Ensembl chr10:106,817,601...106,828,884
JBrowse link
G Tk2 thymidine kinase 2 IDA RGD PMID:21444706 RGD:5134349 NCBI chr19:917,203...939,236
Ensembl chr19:917,203...939,221
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      cellular metabolic process 11040
        heterocycle metabolic process 5630
          pyrimidine-containing compound metabolic process 69
            pyrimidine nucleoside metabolic process 15
              pyrimidine deoxyribonucleoside metabolic process 4
                deoxycytidine metabolic process + 2
                deoxyuridine metabolic process + 0
                pyrimidine deoxyribonucleoside biosynthetic process + 0
                pyrimidine deoxyribonucleoside catabolic process + 1
                pyrimidine deoxyribonucleoside interconversion 0
                thymidine metabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      nitrogen compound metabolic process 10294
        cellular nitrogen compound metabolic process 6722
          nucleobase-containing compound metabolic process 5498
            nucleobase-containing small molecule metabolic process 598
              nucleoside metabolic process 99
                pyrimidine nucleoside metabolic process 15
                  pyrimidine deoxyribonucleoside metabolic process 4
                    deoxycytidine metabolic process + 2
                    deoxyuridine metabolic process + 0
                    pyrimidine deoxyribonucleoside biosynthetic process + 0
                    pyrimidine deoxyribonucleoside catabolic process + 1
                    pyrimidine deoxyribonucleoside interconversion 0
                    thymidine metabolic process + 3
paths to the root