pyrimidine deoxyribonucleoside metabolic process - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS	{{ watchLinkText }}

Term:	pyrimidine deoxyribonucleoside metabolic process	go back to main search page
Accession:	GO:0046125	browse the term
Definition:	The chemical reactions and pathways involving any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).
Synonyms:	exact_synonym:	pyrimidine deoxyribonucleoside metabolism

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Rat (4) Mouse (4) Human (6) Chinchilla (4) Bonobo (5) Dog (5) Squirrel (4) Pig (4) All
Genes (4)

deoxycytidine metabolic process

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dck

deoxycytidine kinase

IDA
IMP

RGD

PMID:8305745, PMID:7686601

RGD:2300395, RGD:2300398

NCBI chr14:20,935,442...20,952,939
Ensembl chr14:20,935,369...20,953,095

thymidine kinase 2

RGD

NCBI chr19:917,203...939,236
Ensembl chr19:917,203...939,221

thymidine catabolic process

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dpyd

dihydropyrimidine dehydrogenase

ISO
IEA
ISS

(PMID:1512248)
GO_REF:0000107
GO_REF:0000024

RGD
Ensembl
UniProt

PMID:1512248

GO_REF:0000024 GO_REF:0000107

NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627

thymidine metabolic process

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tk1

thymidine kinase 1

IDA
IBA

phosphorylation
PMID:21873635

RGD
GO_Central

PMID:6642140, PMID:21873635

RGD:2317232, RGD:13792537

NCBI chr10:106,817,556...106,828,888
Ensembl chr10:106,817,601...106,828,884

thymidine kinase 2

RGD

NCBI chr19:917,203...939,236
Ensembl chr19:917,203...939,221

Term paths to the root

Path 1
Term	Annotations
biological_process	20044
metabolic process	12101
cellular metabolic process	11040
heterocycle metabolic process	5630
pyrimidine-containing compound metabolic process	69
pyrimidine nucleoside metabolic process	15
pyrimidine deoxyribonucleoside metabolic process	4
deoxycytidine metabolic process +	2
deoxyuridine metabolic process +	0
pyrimidine deoxyribonucleoside biosynthetic process +	0
pyrimidine deoxyribonucleoside catabolic process +	1
pyrimidine deoxyribonucleoside interconversion	0
thymidine metabolic process +	3
Path 2
Term	Annotations
biological_process	20044
metabolic process	12101
nitrogen compound metabolic process	10294
cellular nitrogen compound metabolic process	6722
nucleobase-containing compound metabolic process	5498
nucleobase-containing small molecule metabolic process	598
nucleoside metabolic process	99
pyrimidine nucleoside metabolic process	15
pyrimidine deoxyribonucleoside metabolic process	4
deoxycytidine metabolic process +	2
deoxyuridine metabolic process +	0
pyrimidine deoxyribonucleoside biosynthetic process +	0
pyrimidine deoxyribonucleoside catabolic process +	1
pyrimidine deoxyribonucleoside interconversion	0
thymidine metabolic process +	3

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ONTOLOGY REPORT - ANNOTATIONS