Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:thymidine metabolic process
go back to main search page
Accession:GO:0046104 term browser browse the term
Definition:The chemical reactions and pathways involving thymidine, deoxyribosylthymine thymine 2-deoxyriboside, a deoxynucleoside very widely distributed but occurring almost entirely as phosphoric esters in deoxynucleotides and deoxyribonucleic acid, DNA.
Synonyms:exact_synonym: deoxyribosylthymine metabolic process;   deoxyribosylthymine metabolism;   thymidine metabolism

show annotations for term's descendants           Sort by:
 
thymidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tk1 thymidine kinase 1 involved_in IDA
IBA		 phosphorylation
PMID:21873635		 RGD
GO_Central		 PMID:6642140, PMID:21873635, PMID:21873635 RGD:2317232, RGD:13792537, RGD:13792537 NCBI chr10:106,817,556...106,828,888
Ensembl chr10:106,817,601...106,828,884 		JBrowse link
G Tk2 thymidine kinase 2 IDA RGD PMID:21444706 RGD:5134349 NCBI chr19:917,203...939,236
Ensembl chr19:917,203...939,221 		JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO
ISS
IEA		 (PMID:1512248)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:1512248 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20082
    metabolic process 12142
      cellular metabolic process 11078
        heterocycle metabolic process 5645
          pyrimidine-containing compound metabolic process 69
            pyrimidine nucleoside metabolic process 15
              pyrimidine deoxyribonucleoside metabolic process 4
                thymidine metabolic process 3
                  thymidine biosynthetic process 0
                  thymidine catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 20082
    metabolic process 12142
      nitrogen compound metabolic process 10306
        cellular nitrogen compound metabolic process 6740
          nucleobase-containing compound metabolic process 5513
            nucleobase-containing small molecule metabolic process 598
              nucleoside metabolic process 99
                pyrimidine nucleoside metabolic process 15
                  pyrimidine deoxyribonucleoside metabolic process 4
                    thymidine metabolic process 3
                      thymidine biosynthetic process 0
                      thymidine catabolic process 1
paths to the root