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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of nucleobase-containing compound transport
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Accession:GO:0032239 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms:related_synonym: regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport


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negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup153 nucleoporin 153 involved_in ISO
IEA
ISS
(PMID:22253824)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22253824 GO_REF:0000024 GO_REF:0000107 NCBI chr17:18,358,712...18,411,368
Ensembl chr17:18,358,712...18,411,368
JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO
ISS
(PMID:21613532), (PMID:22253824)
GO_REF:0000024
RGD
UniProt
PMID:21613532 PMID:22253824 GO_REF:0000024 NCBI chr13:67,611,685...67,672,833
Ensembl chr13:67,611,708...67,672,827
JBrowse link
positive regulation of nucleoside transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA RGD PMID:15024061 RGD:1625258 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852
JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in ISO (PMID:19864460) RGD PMID:19864460 NCBI chr 7:60,385,688...60,417,661
Ensembl chr 7:60,385,688...60,416,925
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11402034) RGD PMID:11402034 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21613532)
UniProt
RGD
PMID:21613532 GO_REF:0000024 NCBI chr 5:147,927,145...147,953,093
Ensembl chr 5:147,927,152...147,953,093
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:72,071,838...72,103,087
Ensembl chr11:72,921,282...72,929,003
Ensembl chr11:72,921,282...72,929,003
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:124,136,949...124,177,426
Ensembl chr 6:124,142,395...124,177,404
JBrowse link
regulation of ATP:ADP antiporter activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (PMID:16507998) RGD PMID:16507998 NCBI chr17:31,537,580...31,569,904
Ensembl chr17:31,537,591...31,569,904
JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:11402034) RGD PMID:11402034 NCBI chr 7:14,340,168...14,369,835
Ensembl chr 7:14,340,170...14,369,821
JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17234882)
UniProt
Ensembl
RGD
PMID:17234882 GO_REF:0000024 GO_REF:0000107 NCBI chr18:24,849,508...24,891,339
Ensembl chr18:24,849,545...24,880,317
JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO (PMID:28418038) RGD PMID:28418038 NCBI chr 1:36,295,650...36,319,906
Ensembl chr 1:36,295,650...36,319,966
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:19141475) RGD PMID:19141475 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO (MGI:5508611|PMID:17234882) RGD PMID:17234882 MGI:5508611 NCBI chr10:65,470,470...65,507,581
Ensembl chr10:65,470,471...65,507,581
JBrowse link
G Thoc2 THO complex 2 acts_upstream_of_or_within ISO (MGI:5529717|PMID:24315442) RGD PMID:24315442 MGI:5529717 NCBI chr  X:128,153,824...128,268,327
Ensembl chr  X:128,161,895...128,268,322
JBrowse link
G Thoc5 THO complex 5 acts_upstream_of_or_within ISO (MGI:5529717|PMID:24315442) RGD PMID:24315442 MGI:5529717 NCBI chr14:85,138,219...85,171,729
Ensembl chr14:85,142,279...85,171,726
JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) RGD PMID:22253824 NCBI chr13:67,611,685...67,672,833
Ensembl chr13:67,611,708...67,672,827
JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:2446384|PMID:12496368)
UniProt
RGD
PMID:12496368 GO_REF:0000024 MGI:2446384 NCBI chr 5:147,927,145...147,953,093
Ensembl chr 5:147,927,152...147,953,093
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    regulation of biological process 12857
      regulation of localization 3009
        regulation of transport 1988
          regulation of nucleobase-containing compound transport 16
            negative regulation of nucleobase-containing compound transport + 2
            positive regulation of nucleobase-containing compound transport + 6
            regulation of ATP:ADP antiporter activity + 1
            regulation of RNA export from nucleus + 14
            regulation of RNA import into nucleus + 0
            regulation of hypoxanthine transport + 0
            regulation of nucleoside transport + 1
            regulation of thymine transport + 0
Path 2
Term Annotations click to browse term
  biological_process 19612
    localization 6449
      establishment of localization 4865
        transport 4700
          organic substance transport 2466
            nucleobase-containing compound transport 193
              regulation of nucleobase-containing compound transport 16
                negative regulation of nucleobase-containing compound transport + 2
                positive regulation of nucleobase-containing compound transport + 6
                regulation of ATP:ADP antiporter activity + 1
                regulation of RNA export from nucleus + 14
                regulation of RNA import into nucleus + 0
                regulation of hypoxanthine transport + 0
                regulation of nucleoside transport + 1
                regulation of thymine transport + 0
paths to the root