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ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribonucleoside diphosphate metabolic process
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Accession:GO:0009186 term browser browse the term
Definition:The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: deoxyribonucleoside diphosphate metabolism



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dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:45,650,597...45,653,985
Ensembl chr15:45,650,664...45,653,963
JBrowse link
dADP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) RGD PMID:23416111 NCBI chr20:44,724,494...44,941,135
Ensembl chr20:44,724,496...44,941,136
JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in IDA
ISO
(PMID:31201273) RGD PMID:31201273 PMID:4307347 RGD:5147877 NCBI chr10:43,971,514...43,988,658
Ensembl chr10:43,971,509...43,980,107
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:45,650,597...45,653,985
Ensembl chr15:45,650,664...45,653,963
JBrowse link
dGDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO
IBA
(PMID:23416111)
PMID:21873635
RGD PMID:23416111 PMID:21873635 RGD:13792537 NCBI chr20:44,724,494...44,941,135
Ensembl chr20:44,724,496...44,941,136
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(MGI:77260|PMID:8845311)
PMID:21873635
RGD PMID:8845311 PMID:220041 PMID:21873635 MGI:77260, RGD:5133687, RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:3010881 RGD:5133253 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      organic substance metabolic process 11326
        organophosphate metabolic process 939
          nucleoside phosphate metabolic process 508
            nucleoside diphosphate metabolic process 166
              deoxyribonucleoside diphosphate metabolic process 6
                deoxyribonucleoside diphosphate biosynthetic process + 4
                deoxyribonucleoside diphosphate catabolic process + 1
                purine deoxyribonucleoside diphosphate metabolic process + 3
                pyrimidine deoxyribonucleoside diphosphate metabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      nitrogen compound metabolic process 9974
        cellular nitrogen compound metabolic process 6562
          nucleobase-containing compound metabolic process 5452
            nucleobase-containing small molecule metabolic process 576
              nucleoside phosphate metabolic process 508
                nucleoside diphosphate metabolic process 166
                  deoxyribonucleoside diphosphate metabolic process 6
                    deoxyribonucleoside diphosphate biosynthetic process + 4
                    deoxyribonucleoside diphosphate catabolic process + 1
                    purine deoxyribonucleoside diphosphate metabolic process + 3
                    pyrimidine deoxyribonucleoside diphosphate metabolic process + 3
paths to the root