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ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribonucleoside diphosphate metabolic process
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Accession:GO:0009186 term browser browse the term
Definition:The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: deoxyribonucleoside diphosphate metabolism


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dADP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dADP phosphorylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 ISO (PMID:23416111) RGD PMID:23416111 NCBI chr20:46,044,901...46,162,015
Ensembl chr20:46,044,892...46,162,073
JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 IDA
ISO
(PMID:31201273) RGD PMID:31201273, PMID:4307347 RGD:5147877 NCBI chr10:45,535,617...45,552,455
Ensembl chr10:45,535,627...45,543,897
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dGDP phosphorylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 ISO
IBA
(PMID:23416111)
PMID:21873635
RGD PMID:23416111, PMID:21873635 RGD:13792537 NCBI chr20:46,044,901...46,162,015
Ensembl chr20:46,044,892...46,162,073
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455, PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
JBrowse link
G Dtymk deoxythymidylate kinase IDA
IBA
ISO
PMID:21873635
(MGI:77260|PMID:8845311)
RGD PMID:8845311, PMID:220041, PMID:21873635 MGI:77260, RGD:5133687, RGD:13792537 NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:3010881 RGD:5133253 NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455, PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
JBrowse link
G Dtymk deoxythymidylate kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      organic substance metabolic process 11552
        organophosphate metabolic process 947
          nucleoside phosphate metabolic process 517
            nucleoside diphosphate metabolic process 161
              deoxyribonucleoside diphosphate metabolic process 6
                deoxyribonucleoside diphosphate biosynthetic process + 4
                deoxyribonucleoside diphosphate catabolic process + 1
                purine deoxyribonucleoside diphosphate metabolic process + 3
                pyrimidine deoxyribonucleoside diphosphate metabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      nitrogen compound metabolic process 10212
        cellular nitrogen compound metabolic process 6678
          nucleobase-containing compound metabolic process 5476
            nucleobase-containing small molecule metabolic process 591
              nucleoside phosphate metabolic process 517
                nucleoside diphosphate metabolic process 161
                  deoxyribonucleoside diphosphate metabolic process 6
                    deoxyribonucleoside diphosphate biosynthetic process + 4
                    deoxyribonucleoside diphosphate catabolic process + 1
                    purine deoxyribonucleoside diphosphate metabolic process + 3
                    pyrimidine deoxyribonucleoside diphosphate metabolic process + 3
paths to the root