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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine deoxyribonucleoside diphosphate metabolic process
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Accession:GO:0009196 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine deoxyribonucleoside diphosphate metabolism


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dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830 		JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183 		JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA		 (MGI:77260|PMID:8845311)
(PMID:12614151)
PMID:21873635		 RGD PMID:8845311 PMID:12614151 PMID:220041 PMID:21873635 MGI:77260, RGD:5133687, RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870 		JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:3010881 RGD:5133253 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830 		JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183 		JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      small molecule metabolic process 1914
        nucleobase-containing small molecule metabolic process 582
          nucleoside phosphate metabolic process 507
            nucleoside diphosphate metabolic process 33
              pyrimidine nucleoside diphosphate metabolic process 9
                pyrimidine deoxyribonucleoside diphosphate metabolic process 3
                  dCDP metabolic process + 1
                  dTDP metabolic process + 2
                  dUDP metabolic process + 3
                  pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
                  pyrimidine deoxyribonucleoside diphosphate catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      cellular metabolic process 9631
        cellular nitrogen compound metabolic process 6704
          nucleobase-containing compound metabolic process 5683
            nucleobase-containing small molecule metabolic process 582
              nucleoside phosphate metabolic process 507
                nucleoside diphosphate metabolic process 33
                  deoxyribonucleoside diphosphate metabolic process 5
                    pyrimidine deoxyribonucleoside diphosphate metabolic process 3
                      dCDP metabolic process + 1
                      dTDP metabolic process + 2
                      dUDP metabolic process + 3
                      pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
                      pyrimidine deoxyribonucleoside diphosphate catabolic process + 0
paths to the root