Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine deoxyribonucleoside diphosphate metabolic process
go back to main search page
Accession:GO:0009196 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine deoxyribonucleoside diphosphate metabolism



show annotations for term's descendants           Sort by:
 
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(MGI:77260|PMID:8845311)
PMID:21873635
RGD PMID:8845311 PMID:220041 PMID:21873635 MGI:77260, RGD:5133687, RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:3010881 RGD:5133253 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      small molecule metabolic process 1805
        nucleobase-containing small molecule metabolic process 576
          nucleoside phosphate metabolic process 508
            nucleoside diphosphate metabolic process 166
              pyrimidine nucleoside diphosphate metabolic process 8
                pyrimidine deoxyribonucleoside diphosphate metabolic process 3
                  dCDP metabolic process + 1
                  dTDP metabolic process + 2
                  dUDP metabolic process + 3
                  pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
                  pyrimidine deoxyribonucleoside diphosphate catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      cellular metabolic process 10675
        cellular nitrogen compound metabolic process 6562
          nucleobase-containing compound metabolic process 5452
            nucleobase-containing small molecule metabolic process 576
              nucleoside phosphate metabolic process 508
                nucleoside diphosphate metabolic process 166
                  deoxyribonucleoside diphosphate metabolic process 6
                    pyrimidine deoxyribonucleoside diphosphate metabolic process 3
                      dCDP metabolic process + 1
                      dTDP metabolic process + 2
                      dUDP metabolic process + 3
                      pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
                      pyrimidine deoxyribonucleoside diphosphate catabolic process + 0
paths to the root