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ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribonucleoside diphosphate biosynthetic process
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Accession:GO:0009189 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: deoxyribonucleoside diphosphate anabolism;   deoxyribonucleoside diphosphate biosynthesis;   deoxyribonucleoside diphosphate formation;   deoxyribonucleoside diphosphate synthesis



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dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in IDA
ISO
(PMID:31201273) RGD PMID:31201273 PMID:4307347 RGD:5147877 NCBI chr10:43,971,514...43,988,658
Ensembl chr10:43,971,509...43,980,107
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:192455 GO_REF:0000033, RGD:5133256 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(MGI:77260|PMID:8845311)
(PMID:12614151)
GO_REF:0000033
RGD
GO_Central
PMID:8845311 PMID:12614151 PMID:220041 GO_REF:0000033 MGI:77260, RGD:5133687 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:3010881 RGD:5133253 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:192455 GO_REF:0000033, RGD:5133256 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20335
    metabolic process 11743
      organic substance metabolic process 11237
        organophosphate metabolic process 1066
          nucleoside phosphate metabolic process 636
            nucleoside diphosphate metabolic process 184
              nucleoside diphosphate biosynthetic process 13
                deoxyribonucleoside diphosphate biosynthetic process 4
                  purine deoxyribonucleoside diphosphate biosynthetic process + 1
                  pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
Path 2
Term Annotations click to browse term
  biological_process 20335
    metabolic process 11743
      cellular metabolic process 10298
        cellular aromatic compound metabolic process 5965
          nucleobase-containing compound metabolic process 5722
            nucleobase-containing small molecule metabolic process 711
              nucleoside phosphate metabolic process 636
                nucleoside diphosphate metabolic process 184
                  nucleoside diphosphate biosynthetic process 13
                    deoxyribonucleoside diphosphate biosynthetic process 4
                      purine deoxyribonucleoside diphosphate biosynthetic process + 1
                      pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
paths to the root