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ONTOLOGY REPORT - ANNOTATIONS

Term:GBAF complex
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Accession:GO:0140288 term browser browse the term
Definition:A SWI/SNF subcomplex that incorporates two mutually exclusive paralogs, GLTSCR1 (glioma tumor suppressor candidate region gene 1) or GLTSCR1L (GLTSCR1-like), BRD9 (bromodomain-containing 9) and the BAF subunits BAF155, BAF60, SS18, BAF53a, and BRG1/BRM.


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GBAF complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509 		JBrowse link
G Actl6a actin-like 6A part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 3:32,762,695...32,781,122
Ensembl chr 3:32,760,447...32,781,122 		JBrowse link
G Actl6b actin-like 6B part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 5:137,551,784...137,567,844
Ensembl chr 5:137,551,779...137,567,844 		JBrowse link
G Bcl7a B cell CLL/lymphoma 7A part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 5:123,482,511...123,512,146
Ensembl chr 5:123,481,897...123,513,055 		JBrowse link
G Bcl7b B cell CLL/lymphoma 7B part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 5:135,197,226...135,210,706
Ensembl chr 5:135,197,137...135,210,709 		JBrowse link
G Bcl7c B cell CLL/lymphoma 7C part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 7:127,260,626...127,307,938
Ensembl chr 7:127,260,628...127,308,105 		JBrowse link
G Bicra BRD4 interacting chromatin remodeling complex associated protein part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 7:15,704,596...15,785,047
Ensembl chr 7:15,704,597...15,781,846 		JBrowse link
G Bicral BRD4 interacting chromatin remodeling complex associated protein like part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr17:47,109,046...47,201,329
Ensembl chr17:47,109,046...47,169,408 		JBrowse link
G Brd9 bromodomain containing 9 part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr13:74,085,920...74,109,014
Ensembl chr13:74,085,930...74,109,014 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246 		JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr15:99,600,175...99,611,872
Ensembl chr15:99,600,010...99,611,872 		JBrowse link
G Ss18 SS18, subunit of BAF chromatin remodeling complex part_of NAS (MGI:6157116|PMID:29374058) ComplexPortal PMID:29374058 MGI:6157116 NCBI chr18:14,758,686...14,817,476
Ensembl chr18:14,757,255...14,815,971 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28585
    protein-containing complex 6177
      nuclear protein-containing complex 1285
        SWI/SNF superfamily-type complex 94
          GBAF complex 14
Path 2
Term Annotations click to browse term
  cellular_component 28585
    cellular anatomical entity 19619
      organelle 13554
        non-membrane-bounded organelle 4912
          intracellular non-membrane-bounded organelle 4910
            chromosome 1486
              chromatin 822
                SWI/SNF superfamily-type complex 94
                  GBAF complex 14
paths to the root