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COPII vesicle coating - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:COPII vesicle coating
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Accession:GO:0048208 term browser browse the term
Definition:The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
Synonyms:exact_synonym: COPII coating of ER-derived vesicle;   COPII vesicle coat assembly;   COPII vesicle coat formation
 xref: Reactome:R-HSA-204005 "COPII-mediated vesicle transport"

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COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in ISO
ISS
IEA		 (PMID:22358839)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:22358839 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Klhl12 kelch-like family member 12 involved_in IEA
ISO
ISS
IBA		 GO_REF:0000107
(PMID:22358839), (PMID:27716508)
GO_REF:0000024
GO_REF:0000033		 Ensembl
RGD
UniProt
GO_Central		 PMID:22358839 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643 		JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISO
ISS
IEA		 (PMID:27716508)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:27716508 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189 		JBrowse link
G Pef1 penta-EF hand domain containing 1 involved_in ISO
ISS
IEA
IBA		 (PMID:27716508)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033		 RGD
UniProt
Ensembl
GO_Central		 PMID:27716508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067 		JBrowse link
G Preb prolactin regulatory element binding involved_in IDA PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A involved_in ISO
IEA		 (PMID:23433038), (PMID:32358066)
GO_REF:0000107		 RGD
Ensembl		 PMID:23433038 PMID:32358066 GO_REF:0000107 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23433038), (PMID:32358066)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23433038 PMID:32358066 GO_REF:0000024 GO_REF:0000107 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:43,885,542...43,911,976
Ensembl chr11:43,885,661...43,911,976 		JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA
ISS		 (PMID:24618899)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24618899 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Preb prolactin regulatory element binding involved_in IEA
IBA
ISO		 GO_REF:0000104
GO_REF:0000107
GO_REF:0000033
(PMID:32358066)		 UniProt
Ensembl
GO_Central
RGD		 PMID:32358066 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO
IEA		 (PMID:17005010)
GO_REF:0000107		 RGD
Ensembl		 PMID:17005010 GO_REF:0000107 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      vesicle-mediated transport 1654
        vesicle budding from membrane 71
          COPII-coated vesicle budding 30
            COPII vesicle coating 10
              regulation of COPII vesicle coating 4
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      cellular localization 3705
        establishment of localization in cell 2162
          establishment of vesicle localization 189
            vesicle targeting 42
              vesicle targeting, to, from or within Golgi 18
                vesicle targeting, rough ER to cis-Golgi 10
                  COPII vesicle coating 10
                    regulation of COPII vesicle coating 4
paths to the root