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ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear pore nuclear basket
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Accession:GO:0044615 term browser browse the term
Definition:A filamentous, cage-like assembly on the nuclear face of the nuclear pore complex (NPC). In S. cerevisiae, Mlp1p and Mlp2p are two major components of the NPC nuclear basket. In vertebrates, Tpr is a major component.


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nuclear pore nuclear basket term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cetn2 centrin 2 part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr  X:150,769,944...150,774,833
Ensembl chr  X:150,769,953...150,774,919 		JBrowse link
G Cetn3 centrin 3 part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr 2:12,089,025...12,101,828
Ensembl chr 2:12,089,226...12,101,828 		JBrowse link
G Eny2 ENY2, transcription and export complex 2 subunit part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897 		JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 part_of ISO (PMID:18981471) RGD PMID:18981471 NCBI chr12:14,320,892...14,630,750
Ensembl chr12:14,320,892...14,630,703 		JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 part_of ISO (PMID:18981471) RGD PMID:18981471 NCBI chr 4:95,906,692...95,918,885
Ensembl chr 4:95,906,817...95,913,470 		JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr20:12,127,570...12,165,165
Ensembl chr20:12,127,570...12,165,165 		JBrowse link
G Nup153 nucleoporin 153 part_of ISO
IDA
IEA		 (PMID:11839768)
GO_REF:0000107		 RGD
Ensembl		 PMID:11839768 PMID:11839768 GO_REF:0000107, RGD:8553300 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Nup35 nucleoporin 35 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor part_of ISO
IDA		 (PMID:11839768) RGD PMID:11839768 PMID:11839768 RGD:8553300 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Pcid2 PCI domain containing 2 part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712 		JBrowse link
G Ranbp2 RAN binding protein 2 part_of ISO (PMID:11839768) RGD PMID:11839768 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein part_of ISO
IDA
IEA		 (PMID:11839768), (PMID:15229283), (PMID:18981471), (PMID:9024684)
GO_REF:0000107		 RGD
Ensembl		 PMID:9024684 PMID:11839768 PMID:15229283 PMID:18981471 PMID:11839768 GO_REF:0000107, RGD:8553300 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20624
    protein-containing complex 6602
      nuclear protein-containing complex 1276
        nuclear pore nuclear basket 12
Path 2
Term Annotations click to browse term
  cellular_component 20624
    cellular anatomical entity 20386
      organelle 13799
        membrane-bounded organelle 12396
          intracellular membrane-bounded organelle 11845
            nucleus 7395
              nuclear protein-containing complex 1276
                nuclear pore 77
                  nuclear pore nuclear basket 12
paths to the root