ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of CD4-positive, alpha-beta T cell differentiation
Accession: GO:0043370
browse the term
Definition: Any process that modulates the frequency, rate, or extent of CD4-positive, alpha-beta T cell differentiation.
Comment: Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms: exact_synonym: regulation of CD4-positive T lymphocyte differentiation; regulation of CD4-positive T-cell differentiation; regulation of CD4-positive, alpha beta T lymphocyte differentiation
related_synonym: regulation of CD4-positive, alpha beta T cell development
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Sh3rf1
SH3 domain containing ring finger 1
involved_in
ISO
(MGI:6158776|PMID:27084103)
UniProt
PMID:27084103
MGI:6158776
NCBI chrNW_004624769:668,175...834,863
Ensembl chrNW_004624769:666,406...834,156
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Cbfb
core-binding factor subunit beta
involved_in
ISO
(MGI:3772948|PMID:18258917)
UniProt
PMID:18258917
MGI:3772948
NCBI chrNW_004624746:19,204,415...19,264,217
Ensembl chrNW_004624746:19,204,392...19,264,194
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Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:22473704)
UniProt
PMID:22473704
NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184
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Runx3
RUNX family transcription factor 3
involved_in
ISO
(MGI:3772948|PMID:18258917)
UniProt
PMID:18258917
MGI:3772948
NCBI chrNW_004624764:9,192,067...9,218,617
Ensembl chrNW_004624764:9,191,556...9,248,252
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Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(MGI:5565031|PMID:24463518)
UniProt
PMID:24463518
MGI:5565031
NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191
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Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
(PMID:16424184)
MGI
PMID:16424184
NCBI chrNW_004624782:11,981,781...12,008,362
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Jak3
Janus kinase 3
involved_in
ISO
(MGI:3719947|PMID:16020505)
BHF-UCL
PMID:16020505
MGI:3719947
NCBI chrNW_004624908:1,371,595...1,383,879
Ensembl chrNW_004624908:1,371,595...1,383,879
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4942267|PMID:9670042)
BHF-UCL
PMID:9670042
MGI:4942267
NCBI chrNW_004624771:8,580,489...8,599,735
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Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(MGI:5565031|PMID:24463518)
UniProt
PMID:24463518
MGI:5565031
NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191
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Foxp3
forkhead box P3
involved_in
ISO
(PMID:23169781)
UniProt
PMID:23169781
NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
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Il2
interleukin 2
involved_in
ISO
(MGI:5634593|PMID:25642768)
BHF-UCL
PMID:25642768
MGI:5634593
NCBI chrNW_004624777:2,885,537...2,890,453
Ensembl chrNW_004624777:2,885,535...2,890,453
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Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:18792410)
MGI
PMID:18792410
NCBI chrNW_004624733:39,412,800...39,420,079
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Rc3h1
ring finger and CCCH-type domains 1
involved_in
ISO
(MGI:6142401|PMID:25282160)
UniProt
PMID:25282160
MGI:6142401
NCBI chrNW_004624771:7,837,547...7,948,217
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Rc3h2
ring finger and CCCH-type domains 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624760:12,025,206...12,074,548
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Smad7
SMAD family member 7
involved_in
ISO
(MGI:5634593|PMID:25642768)
BHF-UCL
PMID:25642768
MGI:5634593
NCBI chrNW_004624778:12,415,364...12,444,882
Ensembl chrNW_004624778:12,415,282...12,444,835
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Tbx21
T-box transcription factor 21
involved_in
ISO
(MGI:4868293|PMID:21151104)
UniProt
PMID:21151104
MGI:4868293
NCBI chrNW_004624795:4,442,188...4,453,544
Ensembl chrNW_004624795:4,442,188...4,453,143
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Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
(PMID:23034280)
MGI
PMID:23034280
NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
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Zc3h12a
zinc finger CCCH-type containing 12A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624764:20,224,919...20,234,108
Ensembl chrNW_004624764:20,224,906...20,234,629
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Cd69
CD69 molecule
involved_in
ISO
(PMID:24752896)
UniProt
PMID:24752896
NCBI chrNW_004624860:4,345,497...4,364,251
Ensembl chrNW_004624860:4,345,232...4,365,817
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Jak3
Janus kinase 3
involved_in
ISO
(PMID:20696842)
UniProt
PMID:20696842
NCBI chrNW_004624908:1,371,595...1,383,879
Ensembl chrNW_004624908:1,371,595...1,383,879
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Lgals1
galectin 1
involved_in
ISO
(PMID:24752896)
UniProt
PMID:24752896
NCBI chrNW_004624752:10,220,115...10,223,434
Ensembl chrNW_004624752:10,219,872...10,223,317
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Loxl3
lysyl oxidase like 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624749:28,959,682...28,980,428
Ensembl chrNW_004624749:28,960,593...28,980,428
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Tbx21
T-box transcription factor 21
involved_in
ISO
(MGI:4868293|PMID:21151104)
UniProt
PMID:21151104
MGI:4868293
NCBI chrNW_004624795:4,442,188...4,453,544
Ensembl chrNW_004624795:4,442,188...4,453,143
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Tnfsf18
TNF superfamily member 18
involved_in
ISO
(MGI:5551556|PMID:24107315)
UniProt
PMID:24107315
MGI:5551556
NCBI chrNW_004624771:8,711,093...8,722,518
Ensembl chrNW_004624771:8,711,017...8,722,539
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Anxa1
annexin A1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
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Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(MGI:5565031|PMID:24463518)
UniProt
PMID:24463518
MGI:5565031
NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191
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Bcl6
BCL6 transcription repressor
acts_upstream_of_or_within
ISO
(PMID:12594267)
MGI
PMID:12594267
NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689
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Hlx
H2.0 like homeobox
acts_upstream_of_or_within
ISO
(PMID:16424184)
MGI
PMID:16424184
NCBI chrNW_004624835:4,223,252...4,227,892
Ensembl chrNW_004624835:4,223,511...4,227,979
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Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(MGI:3687909|PMID:12242343)
UniProt
PMID:12242343
MGI:3687909
NCBI chrNW_004624738:28,150,004...28,217,850
Ensembl chrNW_004624738:28,150,664...28,216,389
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Rc3h1
ring finger and CCCH-type domains 1
acts_upstream_of_or_within
ISO
(PMID:15917799)
MGI
PMID:15917799
NCBI chrNW_004624771:7,837,547...7,948,217
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Cd83
CD83 molecule
acts_upstream_of_or_within
ISO
(PMID:15322158)
MGI
PMID:15322158
NCBI chrNW_004624756:12,212,921...12,229,974
Ensembl chrNW_004624756:12,210,892...12,229,749
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Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
(PMID:17028180)
MGI
PMID:17028180
NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
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Nckap1l
NCK associated protein 1 like
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624904:2,508,576...2,575,505
Ensembl chrNW_004624904:2,508,799...2,578,609
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Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16227612)
MGI Ensembl
PMID:16227612
GO_REF:0000107
NCBI chrNW_004624797:9,001,846...9,017,441
Ensembl chrNW_004624797:9,001,795...9,018,027
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Socs1
suppressor of cytokine signaling 1
involved_in
ISO
(MGI:6140589|PMID:24880459)
UniProt
PMID:24880459
MGI:6140589
NCBI chrNW_004624824:8,444,877...8,446,628
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4819294|PMID:20639485)
BHF-UCL
PMID:20639485
MGI:4819294
NCBI chrNW_004624771:8,580,489...8,599,735
G
Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(MGI:6140589|PMID:24880459)
UniProt
PMID:24880459
MGI:6140589
NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
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Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
(PMID:16301745), (PMID:18573908) (PMID:16275384) (PMID:12612578)
MGI
PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908
NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679
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Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of_or_within
ISO
(PMID:16227984)
MGI
PMID:16227984
NCBI chrNW_004624903:1,402,586...1,406,554
Ensembl chrNW_004624903:1,402,481...1,406,600
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Klhl25
kelch like family member 25
involved_in
ISO
(MGI:6765767|PMID:34491895) (PMID:34491895)
UniProt
PMID:34491895
MGI:6765767
NCBI chrNW_004624768:13,112,589...13,134,855
Ensembl chrNW_004624768:13,110,912...13,121,206
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LOC101706353
HLA class II histocompatibility antigen, DR alpha chain
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624754:24,079,459...24,086,342
Ensembl chrNW_004624754:24,079,366...24,084,512
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Ifng
interferon gamma
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
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Lgals9
galectin 9
involved_in
ISO
(PMID:20209097)
UniProt
PMID:20209097
NCBI chrNW_004624786:478,048...491,086
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Anxa1
annexin A1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
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Ccl19
C-C motif chemokine ligand 19
involved_in
ISO
(MGI:3576832|PMID:15845453)
BHF-UCL
PMID:15845453
MGI:3576832
NCBI chrNW_004624736:39,088,741...39,090,745
Ensembl chrNW_004624736:39,088,921...39,090,394
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Hlx
H2.0 like homeobox
acts_upstream_of_or_within
ISO
(PMID:16424184)
MGI
PMID:16424184
NCBI chrNW_004624835:4,223,252...4,227,892
Ensembl chrNW_004624835:4,223,511...4,227,979
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Ripk2
receptor interacting serine/threonine kinase 2
acts_upstream_of_or_within
ISO
(PMID:11894097)
MGI
PMID:11894097
NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890
G
Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(MGI:3687909|PMID:12242343)
UniProt
PMID:12242343
MGI:3687909
NCBI chrNW_004624738:28,150,004...28,217,850
Ensembl chrNW_004624738:28,150,664...28,216,389
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Malt1
MALT1 paracaspase
involved_in
ISO
(MGI:6142401|PMID:25282160)
UniProt
PMID:25282160
MGI:6142401
NCBI chrNW_004624792:4,148,258...4,223,431
Ensembl chrNW_004624792:4,148,453...4,217,548
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Nfkbid
NFKB inhibitor delta
involved_in
ISO
(MGI:6142401|PMID:25282160)
UniProt
PMID:25282160
MGI:6142401
NCBI chrNW_004624794:10,172,789...10,180,693
Ensembl chrNW_004624794:10,168,792...10,179,510
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Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
(MGI:6142401|PMID:25282160)
UniProt
PMID:25282160
MGI:6142401
NCBI chrNW_004624789:15,612,311...15,623,878
Ensembl chrNW_004624789:15,612,335...15,624,152
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Nlrp3
NLR family pyrin domain containing 3
involved_in
ISO
(MGI:5689221|PMID:26098997)
UniProt
PMID:26098997
MGI:5689221
NCBI chrNW_004624937:564,191...584,470
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Brd2
bromodomain containing 2
involved_in
ISO
(MGI:6106706|PMID:28262505) (PMID:28262505)
UniProt
PMID:28262505
MGI:6106706
NCBI chrNW_004624754:23,742,506...23,750,668
Ensembl chrNW_004624754:23,742,509...23,750,062
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Brd4
bromodomain containing 4
involved_in
ISO
(MGI:6106706|PMID:28262505)
UniProt
PMID:28262505
MGI:6106706
NCBI chrNW_004624901:2,348,218...2,434,429
Ensembl chrNW_004624901:2,346,734...2,380,852
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Il23a
interleukin 23 subunit alpha
involved_in
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004624802:11,662,851...11,664,444
Ensembl chrNW_004624802:11,662,753...11,665,418
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Il18
interleukin 18
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687
G
Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
(PMID:16424184)
MGI
PMID:16424184
NCBI chrNW_004624782:11,981,781...12,008,362
G
Il6
interleukin 6
acts_upstream_of_or_within
ISO
(PMID:12594267)
MGI
PMID:12594267
NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318
G
Nlrp3
NLR family pyrin domain containing 3
involved_in
ISO
(MGI:5689221|PMID:26098997)
UniProt
PMID:26098997
MGI:5689221
NCBI chrNW_004624937:564,191...584,470
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Prkcz
protein kinase C zeta
involved_in
ISO
(MGI:3584076|PMID:15987782)
UniProt
PMID:15987782
MGI:3584076
NCBI chrNW_004624818:7,758,192...7,846,950
Ensembl chrNW_004624818:7,759,770...7,847,208
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Rara
retinoic acid receptor alpha
involved_in
ISO
(PMID:18416830)
BHF-UCL
PMID:18416830
NCBI chrNW_004624795:2,935,432...2,975,226
Ensembl chrNW_004624795:2,934,731...2,967,232
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4943387|PMID:18354165)
BHF-UCL
PMID:18354165
MGI:4943387
NCBI chrNW_004624771:8,580,489...8,599,735
G
Shb
SH2 domain containing adaptor protein B
acts_upstream_of_or_within
ISO
(PMID:24645804)
MGI
PMID:24645804
NCBI chrNW_004624825:3,846,604...3,972,780
Ensembl chrNW_004624825:3,845,092...3,973,636
G
Il27
interleukin 27
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624782:13,009,450...13,015,548
Ensembl chrNW_004624782:13,009,564...13,015,440
G
Ccl20
C-C motif chemokine ligand 20
NOT|involved_in
ISO
(MGI:3820359|PMID:19050256)
UniProt
PMID:19050256
MGI:3820359
NCBI chrNW_004624843:2,017,738...2,021,153
G
Ccr6
C-C motif chemokine receptor 6
NOT|involved_in
ISO
(MGI:3820359|PMID:19050256)
UniProt
PMID:19050256
MGI:3820359
NCBI chrNW_004624785:12,190,802...12,203,924
G
Gata3
GATA binding protein 3
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:18776904)
Ensembl MGI
PMID:18776904
GO_REF:0000107
NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
G
LOC101706353
HLA class II histocompatibility antigen, DR alpha chain
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624754:24,079,459...24,086,342
Ensembl chrNW_004624754:24,079,366...24,084,512
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
(PMID:18776904)
MGI
PMID:18776904
NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all
Path 1
biological_process
15052
immune system process
2108
leukocyte activation
899
lymphocyte activation
731
T cell activation
511
alpha-beta T cell activation
177
CD4-positive, alpha-beta T cell activation
118
CD4-positive, alpha-beta T cell differentiation
92
regulation of CD4-positive, alpha-beta T cell differentiation
52
negative regulation of CD4-positive, alpha-beta T cell differentiation +
24
positive regulation of CD4-positive, alpha-beta T cell differentiation +
30
regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation +
6
regulation of T-helper cell differentiation +
40
Path 2
biological_process
15052
developmental process
6157
cellular developmental process
4126
cell differentiation
4125
cell development
2965
hemopoiesis
930
leukocyte differentiation
596
mononuclear cell differentiation
483
lymphocyte differentiation
394
T cell differentiation
293
alpha-beta T cell differentiation
129
CD4-positive, alpha-beta T cell differentiation
92
regulation of CD4-positive, alpha-beta T cell differentiation
52
negative regulation of CD4-positive, alpha-beta T cell differentiation +
24
positive regulation of CD4-positive, alpha-beta T cell differentiation +
30
regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation +
6
regulation of T-helper cell differentiation +
40