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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription factor TFTC complex
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Accession:GO:0033276 term browser browse the term
Definition:A protein complex that does not contain either a TATA-binding protein (TBP) or a TBP-like factor, but is composed of several TAFIIs and other proteins, including a histone acetyltransferase. This complex is able to nucleate transcription initiation by RNA polymerase II, can mediate transcriptional activation, and has histone acetyltransferase activity.


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transcription factor TFTC complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 9:15,878,296...16,206,768
Ensembl chr 9:15,868,287...16,206,706 		JBrowse link
G Tada3 transcriptional adaptor 3 part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 4:146,510,213...146,521,975
Ensembl chr 4:146,510,246...146,521,590 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 part_of ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525 PMID:10373431 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Taf12 TATA-box binding protein associated factor 12 part_of ISO (PMID:9603525) RGD PMID:9603525 NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 part_of ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525 PMID:10373431 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 part_of ISO (PMID:10373431), (PMID:9603525) RGD PMID:9603525 PMID:10373431 NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914 		JBrowse link
G Taf5l1 TATA-box binding protein associated factor 5 like 1 part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 part_of ISO
IEA		 (PMID:9603525)
GO_REF:0000107		 RGD
Ensembl		 PMID:9603525 GO_REF:0000107 NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 part_of ISO (PMID:9603525) RGD PMID:9603525 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 part_of ISO
IEA
IBA		 (PMID:15899866)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15899866 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
G Taf9b TATA-box binding protein associated factor 9b part_of ISO (PMID:15899866) RGD PMID:15899866 NCBI chr  X:71,289,290...71,300,142
Ensembl chr  X:71,289,290...71,300,604 		JBrowse link
G Trrap transformation/transcription domain-associated protein part_of ISO (PMID:10373431) RGD PMID:10373431 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20624
    cellular anatomical entity 20386
      nucleoplasm 3535
        RNA polymerase II, holoenzyme 75
          transcription factor TFTC complex 14
Path 2
Term Annotations click to browse term
  cellular_component 20624
    cellular anatomical entity 20386
      organelle 13799
        membrane-bounded organelle 12396
          intracellular membrane-bounded organelle 11845
            nucleus 7395
              nuclear lumen 4027
                nucleoplasm 3535
                  RNA polymerase II, holoenzyme 75
                    transcription factor TFTC complex 14
paths to the root