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Gene: Trrap (transformation/transcription domain-associated protein) Rattus norvegicus

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Symbol:

Trrap

Name:

transformation/transcription domain-associated protein

RGD ID:

1305446

Description:

Enables chromatin binding activity. Predicted to be involved in positive regulation of double-strand break repair via homologous recombination; regulation of cell cycle; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in Golgi apparatus and nucleoplasm. Predicted to be part of chromatin. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 75. Orthologous to human TRRAP (transformation/transcription domain associated protein); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; RNA polymerase II transcription initiation pathway; INTERACTS WITH acrylamide; amphetamine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC288471

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI		GRCr8
mRatBN7.2	12	9,738,006 - 9,827,708 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	9,738,006 - 9,827,674 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	10,540,552 - 10,630,448 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	11,163,764 - 11,253,661 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	10,187,607 - 10,277,241 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	11,537,950 - 11,627,563 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	11,537,950 - 11,627,563 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	13,602,590 - 13,692,085 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	10,054,055 - 10,143,736 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	10,084,790 - 10,170,560 (-)	NCBI
Celera	12	11,542,099 - 11,631,737 (-)	NCBI		Celera
Cytogenetic Map	12	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant nonsyndromic deafness 75 (ISO)

Developmental Delay with or without Dysmorphic Facies and Autism (ISO)

Developmental Disabilities (ISO)

Developmental Disease (ISO)

genetic disease (ISO)

melanoma (ISO)

Neurodevelopmental Disorders (ISO)

pleomorphic xanthoastrocytoma (ISO)

prostate cancer (ISO)

schizophrenia (ISO)

teratoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (ISO)

acrylamide (EXP)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

bortezomib (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

clobetasol (ISO)

clofibrate (ISO)

coumarin (ISO)

diarsenic trioxide (ISO)

diazinon (ISO)

diclofenac (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

ethanol (ISO)

FR900359 (ISO)

fulvestrant (ISO)

hydrogen peroxide (ISO)

ibuprofen (ISO)

ivermectin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

menadione (ISO)

microcystin-LR (ISO)

nickel subsulfide (ISO)

ochratoxin A (ISO)

ozone (ISO)

paracetamol (ISO)

pirinixic acid (EXP)

potassium dichromate (ISO)

quercetin (ISO)

selenium atom (ISO)

serpentine asbestos (ISO)

sodium arsenite (ISO)

sodium dichromate (ISO)

sunitinib (ISO)

tamibarotene (ISO)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

tungsten (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

positive regulation of biosynthetic process (IEA)

positive regulation of DNA-templated transcription (IEA)

positive regulation of double-strand break repair via homologous recombination (ISO)

positive regulation of macromolecule metabolic process (IEA)

regulation of cell cycle (ISO)

regulation of DNA-templated transcription (ISO)

regulation of transcription by RNA polymerase II (ISO)

Cellular Component

Golgi apparatus (ISO)

NuA4 histone acetyltransferase complex (ISO)

nucleoplasm (ISO)

nucleosome (ISO)

nucleus (ISO)

SAGA complex (ISO)

Swr1 complex (ISO)

transcription factor TFTC complex (ISO)

transcription regulator complex (ISO)

Molecular Function

chromatin binding (IDA)

protein binding (ISO)

transcription coactivator activity (ISO)

transcription coregulator activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

INO80 family mediated chromatin remodeling pathway (ISO)

RNA polymerase II transcription initiation pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Binding of c-Myc to chromatin mediates mitogen-induced acetylation of histone H4 and gene activation.	Frank SR, etal., Genes Dev. 2001 Aug 15;15(16):2069-82.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation
7.	ATAC-king the complexity of SAGA during evolution.	Spedale G, etal., Genes Dev. 2012 Mar 15;26(6):527-41. doi: 10.1101/gad.184705.111.
8.	The INO80 family of chromatin-remodeling enzymes: regulators of histone variant dynamics.	Watanabe S and Peterson CL, Cold Spring Harb Symp Quant Biol. 2010;75:35-42. doi: 10.1101/sqb.2010.75.063. Epub 2011 Apr 18.

Additional References at PubMed

PMID:9708738	PMID:10373431	PMID:10966108	PMID:11418595	PMID:11544477	PMID:11564863	PMID:12464179	PMID:14966270	PMID:18206972	PMID:24463511

Genomics

Comparative Map Data

Trrap
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI		GRCr8
mRatBN7.2	12	9,738,006 - 9,827,708 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	9,738,006 - 9,827,674 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	10,540,552 - 10,630,448 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	11,163,764 - 11,253,661 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	10,187,607 - 10,277,241 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	11,537,950 - 11,627,563 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	11,537,950 - 11,627,563 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	13,602,590 - 13,692,085 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	10,054,055 - 10,143,736 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	10,084,790 - 10,170,560 (-)	NCBI
Celera	12	11,542,099 - 11,631,737 (-)	NCBI		Celera
Cytogenetic Map	12	p11	NCBI

TRRAP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	98,878,532 - 99,013,241 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	98,877,933 - 99,050,831 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	98,476,155 - 98,610,864 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	98,314,049 - 98,448,775 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	98,120,763 - 98,255,490	NCBI
Celera	7	93,204,993 - 93,339,694 (+)	NCBI		Celera
Cytogenetic Map	7	q22.1	NCBI
HuRef	7	93,109,006 - 93,243,743 (+)	NCBI		HuRef
CHM1_1	7	98,406,555 - 98,541,284 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	100,111,864 - 100,246,554 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	97,832,168 - 97,966,887 (+)	NCBI

Trrap
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	144,704,547 - 144,796,588 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	144,704,542 - 144,796,588 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	144,767,737 - 144,859,778 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	144,767,732 - 144,859,778 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	145,529,661 - 145,620,642 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	145,021,259 - 145,113,300 (+)	NCBI		MGSCv36	mm8
Celera	5	141,760,268 - 141,850,816 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	84.77	NCBI

Trrap
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955460	14,644,133 - 14,760,787 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955460	14,641,891 - 14,761,641 (+)	NCBI	ChiLan1.0	ChiLan1.0

TRRAP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	116,731,559 - 116,867,814 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	164,996,204 - 165,132,451 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	90,845,518 - 90,981,700 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	104,351,320 - 104,486,720 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	104,351,320 - 104,486,722 (+)	Ensembl	panpan1.1		panPan2

TRRAP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	10,519,734 - 10,635,175 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	10,519,711 - 10,632,776 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	12,145,756 - 12,261,165 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	10,519,773 - 10,632,776 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	10,519,797 - 10,635,242 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	10,389,520 - 10,504,779 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	10,367,972 - 10,481,129 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	10,602,017 - 10,717,277 (-)	NCBI		UU_Cfam_GSD_1.0

Trrap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	138,585,033 - 138,699,329 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936750	1,248,320 - 1,359,473 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936750	1,245,926 - 1,360,226 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRRAP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	5,909,022 - 6,029,333 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	5,903,205 - 6,029,343 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	5,919,254 - 5,939,051 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRRAP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	14,154,962 - 14,289,110 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	14,154,960 - 14,286,512 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	2,004,827 - 2,140,405 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trrap
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	32,349,568 - 32,472,308 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	32,349,521 - 32,472,240 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Trrap
500 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	81
Count of miRNA genes:	70
Interacting mature miRNAs:	74
Transcripts:	ENSRNOT00000030545
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2312418	Kidm41	Kidney mass QTL 41	3.7	0.0001	kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	12	1	19611090	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
1331739	Hrtrt14	Heart rate QTL 14	3.56232		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	12	9318216	12829686	Rat
9590147	Scort7	Serum corticosterone level QTL 7	13.61	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	12	1	42110980	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564498	46669029	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	9603277	46669029	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	6107579	46669029	Rat
61331	Eau2	Experimental allergic uveoretinitis QTL 2		0.0005	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	12	8525423	28064601	Rat
1581516	Cm56	Cardiac mass QTL 56	4.2	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	1	29333307	Rat
9590086	Insglur6	Insulin/glucose ratio QTL 6	18.97	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	12	1	42110980	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
6893681	Bw109	Body weight QTL 109	2.3	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	12	1	23297788	Rat
1302792	Scl21	Serum cholesterol level QTL 21	3.8	0.0011	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	12	7196730	46669029	Rat
1598855	Bp294	Blood pressure QTL 294	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	1	34851688	Rat
1600391	Edcs2	Endometrial carcinoma susceptibility QTL2	3.5	0.01	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	12	6833190	17870186	Rat
10755457	Coatc14	Coat color QTL 14		0.01759	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	12	1	22591684	Rat
724526	Uae3	Urinary albumin excretion QTL 3	4.9	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	12	3906969	10373166	Rat
634351	Apr5	Acute phase response QTL 5	6.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	12	1	44503507	Rat
8694179	Bw150	Body weight QTL 150	2.9	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	12	1	42110980	Rat
634350	Apr4	Acute phase response QTL 4	6		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	1172005	46172005	Rat
7411545	Bw128	Body weight QTL 128	5.2	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	12	1	42110980	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	5564495	46669029	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	36247923	Rat
1300157	Rf21	Renal function QTL 21	4.4		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	12	9318216	32103380	Rat
737979	Pia22	Pristane induced arthritis QTL 22	53.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	1	44465750	Rat
7411586	Foco5	Food consumption QTL 5	5.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	1	42110980	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	1	42450532	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
2302042	Pia38	Pristane induced arthritis QTL 38	3.5	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	12	1	44503507	Rat
7411595	Foco9	Food consumption QTL 9	4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	1	42110980	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
2293086	Iddm30	Insulin dependent diabetes mellitus QTL 30	3.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	8449490	28302290	Rat
7411660	Foco28	Food consumption QTL 28	10.9	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	1	42110980	Rat

Markers in Region

BI286241

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	9,738,359 - 9,738,574 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	11,538,304 - 11,538,518	NCBI	Rnor6.0
Rnor_5.0	12	13,602,944 - 13,603,158	UniSTS	Rnor5.0
RGSC_v3.4	12	10,054,402 - 10,054,616	UniSTS	RGSC3.4
Celera	12	11,542,454 - 11,542,668	UniSTS
RH 3.4 Map	12	121.3	UniSTS
Cytogenetic Map	12	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001105907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000030545

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	9,738,006 - 9,827,674 (-)	Ensembl
Rnor_6.0 Ensembl	12	11,537,950 - 11,627,563 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076323

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	9,738,006 - 9,827,674 (-)	Ensembl
Rnor_6.0 Ensembl	12	11,537,951 - 11,626,916 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091346

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	9,738,006 - 9,827,674 (-)	Ensembl
Rnor_6.0 Ensembl	12	11,537,964 - 11,605,427 (-)	Ensembl

RefSeq Acc Id:

NM_001105907 ⟹ NP_001099377

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,407 (-)	NCBI
mRatBN7.2	12	9,738,006 - 9,827,674 (-)	NCBI
Rnor_6.0	12	11,537,950 - 11,627,563 (-)	NCBI
Rnor_5.0	12	13,602,590 - 13,692,085 (-)	NCBI
RGSC_v3.4	12	10,054,055 - 10,143,736 (-)	RGD
Celera	12	11,542,099 - 11,631,737 (-)	NCBI

Sequence:

show sequence

TAAGCCGGGGCGGGACTGAGCGTGGAGCGGCAGCAGCAGCGTCGGCGGCGAGAGTTCGTCGGGG
ACTCGGGCCCGGATGCTGGAGGCTAGTCCGCAGGTCCCGGCTGGATAAACTCATGGACCTGGCA
GTTCAGGCTTGAGAAGGAAACAAACTCAGAAGAAAGATGGCGTTTGTTGCAACCCAGGGGGCCA
CCGTGGTCGACCAAACCACTCTGATGAAGAAATACCTTCAGTTTGTGGCAGCTCTCACGGATGT
GAATACACCTGATGAAACAAAGTTGAAAATGATGCAGGAAGTCAGCGAGAACTTCGAGAATGTC
ACATCATCTCCTCAGTATTCTACATTCCTGGAACATATCATCCCTCGATTTCTCACATTTCTCC
AAGATGGAGAAGTCCAGTTTCTTCAGGAGAAGCCAGCCCAGCAACTGCGGAAGCTGGTACTTGA
AATCCTCCACAGGATTCCAACCAATGAGCACCTTCGTCCTCATACGAAAAACGTTCTGTCTGTG
ATGTTTCGGTTTTTAGAGACGGAAAATGAAGAAAATGTTCTTATTTGTCTAAGAATAATTATTG
AGCTGCACAAACAGTTTAGGCCACCAATCACGCAAGAGATCCATCACTTTTTGGATTTCGTAAA
ACAGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGCTACTTCGAGAACCCCCAGGGGATCCCT
GAGAACACGGTGCCTCCCCCTGAAATGGTTGGTATGATCACCACAGTTGCTGTGAAAGTCAATC
CTGAGAGGGAGGACAGCGAGACACGGACGCACTCCATCATCCCTCGAGGGTCGCTCTCACTGAA
AGTCCTGGCCGAGCTCCCCATCATTGTTGTGCTAATGTACCAGCTGTACAAACTGAACATCCAC
AACGTTGTTGCCGAGTTCGTGCCCTTGATCATGAACACGATCGCAATTCAGGTATCCGCGCAGG
CCAGGCAACATAAGCTCTACAACAAGGAGTTGTATGCTGACTTCATTGCAGCTCAGATCAAAAC
ACTGTCGTTTTTAGCCTACATCATCAGGATTTACCAGGAGCTGGTGACAAAGTATTCTCAGCAG
ATGGTGAAAGGCATGCTACAGCTGCTTTCCAACTGTCCAGCGGAGACCGCACACCTCCGGAAGG
AGCTTCTCATCGCTGCCAAGCACATCCTCACCACGGAGCTAAGAAACCAGTTCATCCCCTGCAT
GGACAAGCTGTTTGATGAATCTATCCTGATAGGCTCTGGGTACACGGCTCGGGAGACGCTCAGG
CCACTCGCCTACAGCACCCTTGCCGACCTCGTGCATCACGTCCGTCAGCACCTGCCCCTCAGCG
ACCTTTCCCTTGCCGTCCAACTCTTTGCCAAGAACATCGATGATGAGTCCCTGCCCAGTAGCAT
CCAAACCATGTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCGCTCCAAGAGTGAGCAG
GAGAGCGGCAATGGCAGAGACGTCTTGATGCGGATGCTGGAGGTTTTTGTCCTCAAGTTCCACA
CCATTGCCCGGTACCAGCTCTCCGCCATTTTTAAGAAATGCAAGCCTCAATCTGAGCTGGGAGC
TGCAGAAGCTGCACTGCCTGGGGTGCCCACAGCCCCTGCTGCCCCTGGCCCAGCCCCTTCCCCA
GCCCCTGTGCCTGCCCCCCCACCCCCTCCACCTCCAGCCCCAGCCCCAGCCACCCCAGTAACCC
CCGCCCCCGTGCCCCCATTTGAGAAGCAAGGAGAAAAGGACAAGGAGGATAAGCAGACGTTTCA
GGTCACAGATTGTCGGAGTCTGGTGAAAACCCTGGTCTGCGGGGTCAAGACCATCACGTGGGGC
ATAACGTCGTGTAAAGCTCCTGGTGAAGCTCAGTTTATTCCTAACAAGCAGCTGCAACCCAAAG
AAACTCAGATTTATATCAAGCTTGTGAAGTACGCCATGCAGGCCTTGGACATTTATCAGGTCCA
GATCGCAGGAAACGGACAAACATACATTCGAGTGGCCAACTGCCAGACGGTGAGGATGAAGGAA
GAGAAGGAGGTGCTGGAGCACTTCGCGGGGGTCTTCACCATGATGAACCCACTAACGTTCAAGG
AGATCTTCCAGACTACAGTCCCTTACATGGTAGAAAGGATCTCAAAAAACTACGCTCTTCAGAT
TGTTGCCAACTCCTTCTTGGCAAATCCTACTACTTCTGCCCTGTTCGCTACAATCCTGGTGGAG
TACCTTCTGGAGCGACTGCCAGAAATGGGCTCCAATGTGGAGCTATCCAACTTGTACCTCAAAC
TGTTCAAGTTGGTCTTCGGCTCAGTGTCCCTGTTTGCAGCTGAGAATGAGCAGATGCTGAAGCC
TCACCTGCACAAGATCGTGAACAGCTCCATGGAACTGGCGCAGACCGCCAAGGAGCCTTACAAC
TACTTCCTCCTGCTCCGGGCTCTCTTCCGCTCCATAGGAGGCGGCAGCCATGACCTCCTGTATC
AGGAGTTTCTGCCTCTCCTTCCAAATCTCCTCCAAGGACTGAACATGTTGCAGAGCGGCCTGCA
TAAGCAGCACATGAAGGACCTCTTTGTAGAGCTGTGTCTCACGGTACCAGTGCGGCTGAGCTCT
CTCCTGCCCTATCTGCCCATGTTGATGGATCCCTTGGTGTCTGCCCTCAATGGGTCTCAGACAT
TGGTCAGCCAAGGCCTGAGGACCTTGGAGTTGTGTGTGGACAACCTGCAACCAGATTTCCTCTA
TGACCACATTCAGCCTGTGCGTGCAGAGCTCATGCAGGCTCTGTGGCGCACACTGCGCAACCCT
GCAGATAGCATCTCCCACGTGGCCTACCGTGTGCTGGGGAAGTTCGGCGGCAGCAACCGGAAGA
TGTTGAAGGAGTCGCAGAGGCTGCACTATGTTGTGACTGAAGTTCAAGGCCCCAGCATTACTGT
GGAGTTCTCTGACTGCAAAGCGTCTCTCCAGCTTCCAATGGAAAAGGCCATTGAGACCGCCCTG
GATTGCTTGAAAAGTGCCAACACAGAGCCCTACTACCGGAGGCAGGCTTGGGAGGTGATCAGGT
GCTTCCTGGTGGCCATGATGAGCCTGGAGGACAACAAGCACGCGCTCTACCAGCTGCTGGCACA
CCCTAACTTTACAGAAAAGACCATTCCCAGTGTCATCATATCGCACCGCTACAAAGCTCAGGAC
ACTCCAGCACGGAAGACGTTTGAACAGGCTCTGACTGGGGCATTCATGTCTGCAGTCATCAAAG
ACCTGCGACCCAGTGCCCTGCCCTTTGTGGCCAGCTTGATCCGCCACTACACCATGGTAGCGGT
GGCCCAGCAGTGTGGTCCATTCTTGCTACCTTGCTACCAGGTGGGCAGCCAGCCCAGCACGGCC
ATGTTCCACAGTGAAGAAAATGGGTCCAAAGGGATGGACCCCTTGGTCCTCATTGATGCAATAG
CTATCTGTATGGCTTATGAAGAAAAGGAACTGTGCAAAATTGGGGAGGTAGCCCTGGCTGTGAT
ATTCGATGTGGCAAGCATCATCCTGGGCTCAAAAGAGAGGGCGTGCCAGCTGCCCCTCTTCTCC
TACATTGTGGAGCGCCTGTGTGCCTGCTGCTATGAGCAGGCCTGGTATGCCAAACTGGGCGGTG
TGGTCTCCATTAAGTTCCTCATGGAGCGGCTTCCACTCACGTGGGTTCTCCAGAACCAGCAGAC
ATTCCTCAAAGCTCTGCTCTTTGTTATGATGGACCTGACTGGAGAGGTTTCCAATGGGGCAGTC
GCCATGGCGAAGACCACGCTGGAGCAACTCCTGATGAGATGTGCAACGCCTTTGAAGGATGAGG
AGAGAGCAGAAGAGATTGTGGTGGCTCAGGAGAAGTCTTTCCACCATGTGACCCACGATTTGGT
TCGTGAAGTGACCTCTCCAAACTCGACTGTGAGAAAGCAGGCCATGCATTCGCTTCAGGTCCTG
GCCCAGGTCACCGGAAAAAGTGTGACAGTAATTATGGAACCACATAAAGAGGTCCTTCAGGACA
TGGTCCCCCCAAAGAAGCACCTGCTGCGCCACCAGCCTGCCAACGCCCAGATCGGCCTGATGGA
GGGCAACACGTTCTGCACCACGCTGCAGCCGCGGCTCTTCACGATGGATCTCAATGTGGTGGAG
CACAAGGTTTTCTACACAGAGCTACTGAATTTGTGTGAGGCTGAGGATTCAGCTCTGACCAAGC
TGCCCTGTTACAAAAGTCTCCCATCGCTCGTGCCCTTACGGATCGCAGCATTAAATGCTCTCGC
TGCCTGCAATTACCTGCCCCAGTCCAGGGAGAAAATCATCGCTGCTCTCTTCAAAGCCCTCAAC
TCCACCAACAGTGAGCTGCAGGAGGCCGGGGAGGCCTGCATGAGGAAGTTTTTGGAAGGTGCCA
CCATCGAAGTAGATCAGATTCATACGCACATGCGGCCTTTGCTGATGATGCTGGGAGACTACCG
GAGCTTAACGCTGAATGTCGTGAATCGGCTAACCTCTGTTACTCGCCTCTTTCCAAATTCCTTC
AATGATAAGTTTTGTGATCAGATGATGCAACATCTGCGCAAGTGGATGGAAGTGGTGGTCATCA
CCCACAAAGGGGGCCAGAGGAGTGACGGAAATGAAATGAAGATTTGCTCGGCAATTATAAACCT
TTTCCACCTGATCCCAGCTGCTCCTCAAACGCTGGTCAAACCTTTGTTGGAGGTCGTAATGAAG
ACAGAGCGCGCCATGCTGATTGAGGCGGGCAGTCCATTCAGAGAGCCCCTTATCAAGTTCCTGA
CGCGGCATCCCTCGCAGACAGTGGAGCTGTTCATGATGGAAGCGACGCTGAATGACCCCCAGTG
GAGCCGAATGTTCATGAGTTTCTTAAAACACAAAGATGCCAGACCTCTGAGGGATGTGTTGGCA
GCAAACCCCAACAGGTTCATCACTCTGCTGCTGCCTGGCGGTGCACAGACAGCAGTTCGCCCCG
GCTCACCCAGTACCAGTAACATGCGCCTGGACCTCCAGTTCCAGGCCATCAAGATCATAAGCAT
CATAGTTAAAAACGATGATGCGTGGCTGGCTAATCAGCACTCTCTAGTGAGCCAGTTGAGGCGA
GTGTGGGTAAGCGAGACCTTTCAAGAAAGACACCGCAAAGAGAACATGGCCGCCACCAACTGGA
AGGAGCCCAAGCTTCTGGCCTTCTGTCTGCTGAACTATTGCAAGAGGAACTATGGCGACATAGA
GCTGCTCTTCCAGCTACTCCGAGCCTTCACTGGTCGCTTCCTGTGCAACATGACCTTCTTGAAG
GAGTATATGGAAGAAGAGATCCCCAAAAACTACAGCATTGCTCAGAAGCGGGCACTCTTCTTCC
GCTTCGTAGAGTTCAACGACCCCAACTTTGGAGATGAACTGAAAGCAAAGGTTCTGCAGCACAT
CCTGAATCCTGCTTTCTTGTACAGCTTTGAGAAGGGGGAAGGAGAGCAGCTCTTAGGACCTCCT
AATCCAGAGGGAGACAACCCGGAGAGCATCACCAGTGTGTTTATAACCAAGGTCCTGGACCCTG
AGAAACAAGCTGACATGCTAGACTCCCTGCGCATCTACCTCCTGCAGTACGCCACGCTGCTGGT
GGAGCATGCCCCCCACCACATCCACGACAACAACAAGAACCGCAACAGCAAGCTGCGCCGTCTC
ATGACCTTTGCGTGGCCCTGTCTGCTCTCCAAGGCCTGCGTGGACCCGGCCTGCAAGTACAGCG
GGCACCTGCTGCTGGCGCACATCATCGCCAAGTTCGCCATCCACAAGAAAATCGTCCTGCAGGT
TTTCCACAGTCTTCTCAAGGCTCACGCAATGGAAGCCCGAGCGATTGTGAGACAAGCAATGGCC
ATTTTGACCCCAGCGGTACCAGCCCGCATGGAGGATGGACACCAGATGCTGACCCACTGGACTA
GGAAGATCATCGTGGAGGAGGGGCATACAGTCCCACAGCTGGTGCACATTCTTCACCTCATAGT
GCAGCACTTTAAGGTGTACTACCCGGTGCGGCACCACTTGGTACAGCACATGGTCAGTGCCATG
CAGAGGCTGGGCTTCACACCCAGTGTCACCATTGAGCAGAGGAGGCTGGCTGTGGACCTCTCCG
AGGTTGTCATCAAGTGGGAACTGCAGAGGATCAAGGACCAGCAGCCGGATTCTGACATGGACCC
AAATTCTGGTGGAGAGGGCGTCAACTCGGTGTCCATTAAGAGGGGCCTGTCTGTAGACTCTGCG
CAGGAGGTGAAACGCTTCAGGGCGGCCACCGGAGCCATCAGCGCAGTGTTTGGGAGGAGCCAGT
CACTGCCAGGAGCTGACTCTCTTCTTGCCAAACCCATTGACAAGCAGCATACAGACACCGTGGT
GAACTTCCTCATTCGAGTGGCTTGCCAGGTGAATGACAACACCAACACAGCAGGGTCCCCTGGA
GAGGTGCTTTCTCGACGCTGTGTGAATCTCCTCAAGACCGCTCTACGGCCAGATATGTGGTGCA
AGTCGGAGCTCAAACTGCAGTGGTTTGACAAGCTGCTGATGACTGTGGAGCAGCCTAACCAGGT
GAACTATGGGAATATCTGCACGGGATTGGAAGTACTGAACTTCTTGCTAACTGTGCTGCAGTCT
CCGGCCATCCTCAGTAGCTTCAAGCCCCTACAGCGGGGCATTGCAGCCTGCATGACCTGTGGCA
ACACCAAAGTGCTGCGAGCTGTGCACAGCCTCCTCTCCCGACTGATGAGCATTTTCCCTACAGA
GCCGAGCACTTCGAGCGTGGCCTCCAAGTATGAAGAGCTGGAGTGCCTCTATGCAGCTGTGGGG
AAGGTCATCTACGAAGGCCTCACTAACTACGAGAAGGCCACCAGCGCCAACCCCTCCCAGCTCT
TCGGGACACTTATGATCCTCAAGTCGGCCTGCTGCAACAACCCGAGCTACATCGACAGGCTCAT
CTCCGTCTTCATGCGCTCCCTACAGAAGATGGTCCGAGAGCATCTGAACCCACAGGCAGCATCC
GGGAGCACCGAAGCAACCGCAGCTGGAGCAAGCGAGCTGGTGATGCTGAGCCTGGACCTCGTGA
AGACTCGTCTGGCGGTGATGAGCATGGAGATGCGGAAGAACTTCATCCAGACCATCCTGACGTC
CCTCATAGAGAAGTCCCCAGATGCCAAGATCCTCCGAGCTGTGGTGAAGATTGTGGAGGAATGG
GTTAAGAATAATTCCCCGATGGCAGCCAATCAGACGCCTACACTCCGGGAGAAGTCAATCTTGC
TCGTGAAAATGATGACTTACATAGAGAAACGCTTTCCGGAAGACCTTGAACTAAATGCCCAGTT
TTTGGACCTTGTTAACTATGTGTACAGGGATGAGGCACTCTCAGGCAGTGAGCTGACTGCAAAG
CTTGAGCCCGCCTTTCTCTCTGGGCTGCGCTGCGCCCAGCCATTGATCAGGGCCAAGTTTTTTG
AGGTTTTTGACAACTCTATGAAACGCCGTGTCTATGAGCGTCTGTTGTACGTCACTTGTTCCCA
GAATTGGGAGGCCATGGGGAGCCATTTCTGGATCAAGCAGTGCATTGAGCTCCTCCTGGCGGTG
TGCGAGAAGAGCACAGCCATTGGAACCAGCTGCCAGGGAGCCATGCTTCCCTCCATTACCAATG
TCATCAACCTGGCCGACAGCCATGACCGGGCTGCCTTTGCCATGGTCACTCATGTCAAGCAGGA
GCCTCGGGAACGAGAGAACAGTGAGTCTAAAGAAGAGGACGTGGAGATTGATATTGAGCTGGCC
CCTGGTGACCAGACCAGCACACCCAAAACCAAAGAGCTTTCTGAGAAGGACATTGGAAACCAGC
TACACATGCTTACCAACAGACATGACAAATTTCTCGATACTCTCCGGGAAGTGAAGACCGGGGC
ACTGCTCAGTGCCTTCGTTCAGCTCTGCCACATTTCCACAACGTTGGCTGAGAAGACCTGGGTC
CAGCTTTTCCCAAGGCTGTGGAAAATCCTCTCTGACAGACAGCAGCATGCTCTGGCGGGGGAGA
TCAGCCCTTTCCTGTGCAGCGGCAGTCATCAGGTGCAGCGAGACTGTCAGCCGAGCGCTTTGAA
CTGCTTCGTGGAAGCCATGTCCCAGTGCGTCCCCCCGATCCCCATGCGACCCTGTGTGCTGAAG
TACCTGGGAAAGACTCACAACCTTTGGTTCCGTTCCACGTTGATGCTGGAGCACCAGGCTTTCG
AGAAGGGGCTGAGCCTGCCAATCAAACCGAAGCAGACAGCCGAGTTTTATGAGCAGGAAAGCAT
AACACCGCCTCAGCAGGAGATACTGGATTCCCTCGCGGAACTTTACTCTCTGCTACAAGAAGAG
GACATGTGGGCTGGCCTATGGCAGAAGCGATGCAAGTTCTCAGAGACGGCCACCGCCATTGCTT
ATGAGCAGCACGGCTTCTTTGAGCAGGCCCAAGAATCCTACGAAAAGGCAATGGACAAAGCTAA
AAAAGAGCATGAGCGGAGCAATGCCTCCCCCGCCATCTTCCCTGAGTACCAGCTGTGGGAGGAC
CACTGGATTAGGTGCTCCAAGGAGCTGAACCAGTGGGAAGCCTTGACTGAGTTTGGCCAGTCTA
AAGGTCACATAAATCCTTACCTGGTCCTGGAGTGTGCGTGGAGGGTGTCCAACTGGACCGCCAT
GAAGGAGGCGCTGGTGGAGGTCAGCTGTCCCAAGGAGATGGCCTGGAGGGTTAACATGTACCGG
GGCTACCTGGCCATTTGCCATCCCGAGGAGCAGCAGCTCAGCTTCATTGAGCGCCTGGTGGAGA
TGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGCGGCTGCCCCATGTGGTGTCTCACGTGCATAC
ACCTCTTCTGCAGGCTGCCCAGCAGATCATCGAGCTTCAGGAAGCTGCGCAGATAAATGCGGGC
CTGCAGCCGACCAACCTGGGCAGGAACAACAGCCTCCACGACATGAAGACGGTGGTGAAGACCT
GGAGGAACCGGCTGCCCATCGTGTCTGACGACTTGTCGCACTGGAGCAGCGTCTTTATGTGGCG
GCAGCACCATTACCAGGCTATTGTAACTGCATATGAAAATAGCTCTCACCACGACCCGAGCTCC
AATAATGCCATGCTGGGTGTCCATGCCTCCGCCTCTGCTATCATCCAGTATGGGAAGATCGCCC
GGAAACAGGGTCTGGTTAATGTGGCGCTGGATATACTGAGCCGCATTCACACCATCCCTACTGT
GCCCATCGTGGATTGCTTCCAGAAGATTCGGCAGCAAGTGAAGTGCTACCTCCAGCTGGCGGGA
GTGATGGGCAAGAATGAGTGCATGCAGGGCCTGGAGGTTATTGAGTCCACAAACCTAAAATACT
TCACAAAGGAGATGACAGCTGAGTTCTACGCCCTGAAGGGGATGTTCCTGGCTCAGATCAACAA
ATCTGAGGAGGCCAACAAAGCATTCTCGGCAGCTGTGCAGATGCATGACGTGCTGGTGAAGGCC
TGGGCCATGTGGGGGGACTACCTGGAGAGCATCTTCGTGAAGGAGCGGCAGCTGCACCTGGGCG
TGTCCGCCATCACCTGCTACCTGCACGCGTGCCGCCATCAGAACGAGAGCAAGTCAAGGAAGTA
CTTGGCCAAGGTGCTGTGGCTTCTGAGTTTCGACGATGACAAAAATACGCTGGCAGATGCTGTG
GACAAGTACTGCATTGGCGTACCCCCCATCCAGTGGCTGGCGTGGATCCCACAGCTGCTCACCT
GCCTGGTGGGCTCCGAGGGCAAGCTGCTGCTGAACCTTATCAGCCAGGTTGGACGAGTGTATCC
CCAAGCCGTCTACTTTCCCATCCGGACTCTGTACCTGACCCTGAAAATTGAGCAGAGGGAACGC
TACAAGAGTGATTCTGGACAGCAGCAGCCCAGCTCAGTGGGTAACCAGTCCCATTCTGCATCAG
ATCCAGGGCCCATAAGAGCAACGGCGCCCATGTGGCGCTGCAGCCGAATCATGCACATGCAGAG
GGAGCTCCACCCCACCCTCCTGTCCTCCCTGGAGGGCATCGTCGACCAGATGGTCTGGTTCAGA
GAGAACTGGCACGAAGAGGTGCTCAGGCAGCTCCAGCAGGGCCTGGCAAAGTGTTACTCTGTTG
CCTTTGAAAAGAGTGGTGCTGTGTCAGACGCCAAGATTACCCCTCACACTCTCAACTTTGTCAA
GAAGCTGGTGAGCACTTTCGGGGTAGGCCTGGAGAATGTGTCCAACGTCTCAACCATGTTCTCC
AGCGCAGCCTCTGAGTCTCTGGCCCGACGGGCACAAGCCACAGCCCAGGATCCTGTCTTCCAGA
AGCTAAAAGGCCAGTTCACCACAGATTTCGACTTCAGTGTCCCAGGATCCATGAAGCTTCATAA
TCTGATCTCTAAATTGAAAAAGTGGATCAAAATCCTCGAGGCTAAAACCAAGCAGCTTCCCAAA
TTCTTCCTCATAGAAGAAAAATGTCGGTTCTTGAGCAATTTCTCGGCTCAGACAGCTGAAGTAG
AGATCCCTGGGGAGTTTTTGATGCCCAAGCCAACGCATTACTACATTAAGATTGCTCGCTTTAT
GCCCCGAGTGGAGATCGTGCAGAAGCACAACACAGCAGCCCGCAGGCTCTACATCCGGGGGCAC
AATGGCAAGATCTACCCGTACCTGGTCATGAATGACGCCTGCCTCACGGAGTCGCGCAGGGAGG
AGCGAGTGCTGCAGCTGCTGCGTCTGCTGAACCCTTGCCTGGAGAAGAGGAAGGAGACCACCAA
GAGGCACTTGTTCTTCACAGTTCCTCGGGTTGTGGCTGTGTCCCCTCAGATGCGCCTCGTGGAA
GACAACCCCTCTTCACTTTCCCTCGTGGAGATCTACAAGCAGCGCTGCGCCAAGAAAGGCATTG
AGCACGACAACCCCATCTCCCGCTACTATGACAGGCTGGCCACAGTACAGGCACGGGGGACCCA
GGCCAGCCACCAGGTCCTCCGAGACATTCTCAAAGAGGTCCAAAGCAACATGGTGCCCCGCAGC
ATGCTGAAGGAGTGGGCCCTGCACACGTTTCCCAACGCTACAGACTACTGGACCTTCCGGAAGA
TGTTCACCATCCAGTTGGCCCTCATCGGCTTTGCAGAGTTTGTCCTGCACCTAAACAGACTCAA
CCCTGAGATGCTGCAGATCGCTCAGGACACGGGCAAGCTGAATGTCGCTTACTTCCGATTTGAC
ATAAATGATGCAACTGGGGACTTAGATGCCAACCGTCCAGTCCCTTTCCGCCTCACGCCCAACA
TATCTGAGTTCCTGACCACCATTGGCGTCTCGGGCCCACTGACGGCCTCCATGATTGCTGTCTC
GCGGTGCTTCGCCCAGCCCAACTTCAAGGTGGATGGCATTCTGAAAACTGTGCTCCGAGATGAG
ATCATTGCTTGGCACAAAAAGACCCAGGAGGACACTTCCTCTGCCCTGTCGGCCGCCGGGCAGC
CTGAGAACATGGACAGCCAGCAGCTGGTCTCCTTGGTTCAGAAAGCTGTCACTGCCGTCATGAC
CCGCCTGCACAACTTGGCCCAGTTCGACGGTGGGGAGAGCAAGGTGAACACCCTGGTGGCTGCT
GCCAACAGCCTGGACAACCTGTGTCGCATGGACCCTGCCTGGCATCCGTGGCTGTGACCTCCGC
AGCTGTCACCCCACCCAGAATGTGAAATGTGCCTCTCAGCCTCTGAGCCCCTGGCTGTTGAGAC
CTCTCTGCCTTGTTACCCATGTTATTTAGTGACCTCCTTCCCAGTGGCTGTGTGGAAGAGCATG
GGATAGTCTGGAGGGACCCTGCACCACGGACGGCCAGGCCAGTGGAGATGGCGGCTTCCGGGGT
GCTTTGTAACTCGAGGAGTCCCAGGCTGGGGCTCTTTGTGGTACTCCTGTCTCAGTGTGAAGGG
CAGATTGAGAATGTCCCCTCCATCCCTTGACTTCAGACGCTGCACCTCAGAGCAGCTGTGCGCT
GTGCACAGACCTTCTGCAGGGCCTGGGAAACCCTGTGTTAGCTAGGAATCAGGACAGCCGCACA
GGCTTGCTTCTCTGAGCAGAGTTTTCACACTCTCACTGGTTGGGAAATCTCGATAAGTCTGACG
GTGTGGATGTGGCTCAGTGAGCCCGAGTTGCCCGCAGGGGAGAGCTGCCCTGGCCTCACCAGAT
TCTGATTCAGCTGTGCAGAAACGGAGTTGTGGGGGCCAGCAGGCCAACCTTTCACTTTTTACTG
CTGGCTTGTTGGATATCTTTTAGAAATTTACTATCATTGTACCAGAAAAAAGAAAAAAAAAGAT
AAGAAAATCATTTTGTTTTTCCTTCNTAATNTAAAAAAAAAGCAGTGAAAGTTTGTCCCCTTTA
GTCTGTTCTGTTGACATTTTTATAAATCTGAGCATTGAGAACGTTCTAGCTAAATTTGTACAGT
GTGATTTTTTTTTTTTTAGAATAAATATTTTATAAAAGTA

hide sequence

RefSeq Acc Id:

XM_039089159 ⟹ XP_038945087

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI
mRatBN7.2	12	9,738,006 - 9,827,708 (-)	NCBI

RefSeq Acc Id:

XM_039089162 ⟹ XP_038945090

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI
mRatBN7.2	12	9,738,006 - 9,827,708 (-)	NCBI

RefSeq Acc Id:

XM_039089168 ⟹ XP_038945096

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI
mRatBN7.2	12	9,738,006 - 9,827,708 (-)	NCBI

RefSeq Acc Id:

XM_039089172 ⟹ XP_038945100

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI
mRatBN7.2	12	9,738,821 - 9,824,570 (-)	NCBI

RefSeq Acc Id:

XM_039089173 ⟹ XP_038945101

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI
mRatBN7.2	12	9,738,006 - 9,827,708 (-)	NCBI

RefSeq Acc Id:

XM_039089174 ⟹ XP_038945102

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI
mRatBN7.2	12	9,738,006 - 9,827,708 (-)	NCBI

RefSeq Acc Id:

XM_063271119 ⟹ XP_063127189

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271121 ⟹ XP_063127191

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,291 (-)	NCBI

RefSeq Acc Id:

XM_063271122 ⟹ XP_063127192

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271123 ⟹ XP_063127193

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271124 ⟹ XP_063127194

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271125 ⟹ XP_063127195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271126 ⟹ XP_063127196

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271127 ⟹ XP_063127197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271128 ⟹ XP_063127198

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271130 ⟹ XP_063127200

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271131 ⟹ XP_063127201

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271132 ⟹ XP_063127202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271133 ⟹ XP_063127203

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

RefSeq Acc Id:

XM_063271134 ⟹ XP_063127204

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	14,851,758 - 14,941,444 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001099377	(Get FASTA)	NCBI Sequence Viewer
	XP_038945087	(Get FASTA)	NCBI Sequence Viewer
	XP_038945090	(Get FASTA)	NCBI Sequence Viewer
	XP_038945096	(Get FASTA)	NCBI Sequence Viewer
	XP_038945100	(Get FASTA)	NCBI Sequence Viewer
	XP_038945101	(Get FASTA)	NCBI Sequence Viewer
	XP_038945102	(Get FASTA)	NCBI Sequence Viewer
	XP_063127189	(Get FASTA)	NCBI Sequence Viewer
	XP_063127191	(Get FASTA)	NCBI Sequence Viewer
	XP_063127192	(Get FASTA)	NCBI Sequence Viewer
	XP_063127193	(Get FASTA)	NCBI Sequence Viewer
	XP_063127194	(Get FASTA)	NCBI Sequence Viewer
	XP_063127195	(Get FASTA)	NCBI Sequence Viewer
	XP_063127196	(Get FASTA)	NCBI Sequence Viewer
	XP_063127197	(Get FASTA)	NCBI Sequence Viewer
	XP_063127198	(Get FASTA)	NCBI Sequence Viewer
	XP_063127200	(Get FASTA)	NCBI Sequence Viewer
	XP_063127201	(Get FASTA)	NCBI Sequence Viewer
	XP_063127202	(Get FASTA)	NCBI Sequence Viewer
	XP_063127203	(Get FASTA)	NCBI Sequence Viewer
	XP_063127204	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL89625	(Get FASTA)	NCBI Sequence Viewer
	EDL89626	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000076944
	ENSRNOP00000076944.1
	ENSRNOP00000095357
	ENSRNOP00000095357.1
	ENSRNOP00000095828
	ENSRNOP00000095828.1
	ENSRNOP00000111242

RefSeq Acc Id:

NP_001099377 ⟸ NM_001105907

- UniProtKB:

A0A8I6GLC1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAFVATQGATVVDQTTLMKKYLQFVAALTDVNTPDETKLKMMQEVSENFENVTSSPQYSTFLEH
IIPRFLTFLQDGEVQFLQEKPAQQLRKLVLEILHRIPTNEHLRPHTKNVLSVMFRFLETENEEN
VLICLRIIIELHKQFRPPITQEIHHFLDFVKQIYKELPKVVNRYFENPQGIPENTVPPPEMVGM
ITTVAVKVNPEREDSETRTHSIIPRGSLSLKVLAELPIIVVLMYQLYKLNIHNVVAEFVPLIMN
TIAIQVSAQARQHKLYNKELYADFIAAQIKTLSFLAYIIRIYQELVTKYSQQMVKGMLQLLSNC
PAETAHLRKELLIAAKHILTTELRNQFIPCMDKLFDESILIGSGYTARETLRPLAYSTLADLVH
HVRQHLPLSDLSLAVQLFAKNIDDESLPSSIQTMSCKLLLNLVDCIRSKSEQESGNGRDVLMRM
LEVFVLKFHTIARYQLSAIFKKCKPQSELGAAEAALPGVPTAPAAPGPAPSPAPVPAPPPPPPP
APAPATPVTPAPVPPFEKQGEKDKEDKQTFQVTDCRSLVKTLVCGVKTITWGITSCKAPGEAQF
IPNKQLQPKETQIYIKLVKYAMQALDIYQVQIAGNGQTYIRVANCQTVRMKEEKEVLEHFAGVF
TMMNPLTFKEIFQTTVPYMVERISKNYALQIVANSFLANPTTSALFATILVEYLLERLPEMGSN
VELSNLYLKLFKLVFGSVSLFAAENEQMLKPHLHKIVNSSMELAQTAKEPYNYFLLLRALFRSI
GGGSHDLLYQEFLPLLPNLLQGLNMLQSGLHKQHMKDLFVELCLTVPVRLSSLLPYLPMLMDPL
VSALNGSQTLVSQGLRTLELCVDNLQPDFLYDHIQPVRAELMQALWRTLRNPADSISHVAYRVL
GKFGGSNRKMLKESQRLHYVVTEVQGPSITVEFSDCKASLQLPMEKAIETALDCLKSANTEPYY
RRQAWEVIRCFLVAMMSLEDNKHALYQLLAHPNFTEKTIPSVIISHRYKAQDTPARKTFEQALT
GAFMSAVIKDLRPSALPFVASLIRHYTMVAVAQQCGPFLLPCYQVGSQPSTAMFHSEENGSKGM
DPLVLIDAIAICMAYEEKELCKIGEVALAVIFDVASIILGSKERACQLPLFSYIVERLCACCYE
QAWYAKLGGVVSIKFLMERLPLTWVLQNQQTFLKALLFVMMDLTGEVSNGAVAMAKTTLEQLLM
RCATPLKDEERAEEIVVAQEKSFHHVTHDLVREVTSPNSTVRKQAMHSLQVLAQVTGKSVTVIM
EPHKEVLQDMVPPKKHLLRHQPANAQIGLMEGNTFCTTLQPRLFTMDLNVVEHKVFYTELLNLC
EAEDSALTKLPCYKSLPSLVPLRIAALNALAACNYLPQSREKIIAALFKALNSTNSELQEAGEA
CMRKFLEGATIEVDQIHTHMRPLLMMLGDYRSLTLNVVNRLTSVTRLFPNSFNDKFCDQMMQHL
RKWMEVVVITHKGGQRSDGNEMKICSAIINLFHLIPAAPQTLVKPLLEVVMKTERAMLIEAGSP
FREPLIKFLTRHPSQTVELFMMEATLNDPQWSRMFMSFLKHKDARPLRDVLAANPNRFITLLLP
GGAQTAVRPGSPSTSNMRLDLQFQAIKIISIIVKNDDAWLANQHSLVSQLRRVWVSETFQERHR
KENMAATNWKEPKLLAFCLLNYCKRNYGDIELLFQLLRAFTGRFLCNMTFLKEYMEEEIPKNYS
IAQKRALFFRFVEFNDPNFGDELKAKVLQHILNPAFLYSFEKGEGEQLLGPPNPEGDNPESITS
VFITKVLDPEKQADMLDSLRIYLLQYATLLVEHAPHHIHDNNKNRNSKLRRLMTFAWPCLLSKA
CVDPACKYSGHLLLAHIIAKFAIHKKIVLQVFHSLLKAHAMEARAIVRQAMAILTPAVPARMED
GHQMLTHWTRKIIVEEGHTVPQLVHILHLIVQHFKVYYPVRHHLVQHMVSAMQRLGFTPSVTIE
QRRLAVDLSEVVIKWELQRIKDQQPDSDMDPNSGGEGVNSVSIKRGLSVDSAQEVKRFRAATGA
ISAVFGRSQSLPGADSLLAKPIDKQHTDTVVNFLIRVACQVNDNTNTAGSPGEVLSRRCVNLLK
TALRPDMWCKSELKLQWFDKLLMTVEQPNQVNYGNICTGLEVLNFLLTVLQSPAILSSFKPLQR
GIAACMTCGNTKVLRAVHSLLSRLMSIFPTEPSTSSVASKYEELECLYAAVGKVIYEGLTNYEK
ATSANPSQLFGTLMILKSACCNNPSYIDRLISVFMRSLQKMVREHLNPQAASGSTEATAAGASE
LVMLSLDLVKTRLAVMSMEMRKNFIQTILTSLIEKSPDAKILRAVVKIVEEWVKNNSPMAANQT
PTLREKSILLVKMMTYIEKRFPEDLELNAQFLDLVNYVYRDEALSGSELTAKLEPAFLSGLRCA
QPLIRAKFFEVFDNSMKRRVYERLLYVTCSQNWEAMGSHFWIKQCIELLLAVCEKSTAIGTSCQ
GAMLPSITNVINLADSHDRAAFAMVTHVKQEPRERENSESKEEDVEIDIELAPGDQTSTPKTKE
LSEKDIGNQLHMLTNRHDKFLDTLREVKTGALLSAFVQLCHISTTLAEKTWVQLFPRLWKILSD
RQQHALAGEISPFLCSGSHQVQRDCQPSALNCFVEAMSQCVPPIPMRPCVLKYLGKTHNLWFRS
TLMLEHQAFEKGLSLPIKPKQTAEFYEQESITPPQQEILDSLAELYSLLQEEDMWAGLWQKRCK
FSETATAIAYEQHGFFEQAQESYEKAMDKAKKEHERSNASPAIFPEYQLWEDHWIRCSKELNQW
EALTEFGQSKGHINPYLVLECAWRVSNWTAMKEALVEVSCPKEMAWRVNMYRGYLAICHPEEQQ
LSFIERLVEMASSLAIREWRRLPHVVSHVHTPLLQAAQQIIELQEAAQINAGLQPTNLGRNNSL
HDMKTVVKTWRNRLPIVSDDLSHWSSVFMWRQHHYQAIVTAYENSSHHDPSSNNAMLGVHASAS
AIIQYGKIARKQGLVNVALDILSRIHTIPTVPIVDCFQKIRQQVKCYLQLAGVMGKNECMQGLE
VIESTNLKYFTKEMTAEFYALKGMFLAQINKSEEANKAFSAAVQMHDVLVKAWAMWGDYLESIF
VKERQLHLGVSAITCYLHACRHQNESKSRKYLAKVLWLLSFDDDKNTLADAVDKYCIGVPPIQW
LAWIPQLLTCLVGSEGKLLLNLISQVGRVYPQAVYFPIRTLYLTLKIEQRERYKSDSGQQQPSS
VGNQSHSASDPGPIRATAPMWRCSRIMHMQRELHPTLLSSLEGIVDQMVWFRENWHEEVLRQLQ
QGLAKCYSVAFEKSGAVSDAKITPHTLNFVKKLVSTFGVGLENVSNVSTMFSSAASESLARRAQ
ATAQDPVFQKLKGQFTTDFDFSVPGSMKLHNLISKLKKWIKILEAKTKQLPKFFLIEEKCRFLS
NFSAQTAEVEIPGEFLMPKPTHYYIKIARFMPRVEIVQKHNTAARRLYIRGHNGKIYPYLVMND
ACLTESRREERVLQLLRLLNPCLEKRKETTKRHLFFTVPRVVAVSPQMRLVEDNPSSLSLVEIY
KQRCAKKGIEHDNPISRYYDRLATVQARGTQASHQVLRDILKEVQSNMVPRSMLKEWALHTFPN
ATDYWTFRKMFTIQLALIGFAEFVLHLNRLNPEMLQIAQDTGKLNVAYFRFDINDATGDLDANR
PVPFRLTPNISEFLTTIGVSGPLTASMIAVSRCFAQPNFKVDGILKTVLRDEIIAWHKKTQEDT
SSALSAAGQPENMDSQQLVSLVQKAVTAVMTRLHNLAQFDGGESKVNTLVAAANSLDNLCRMDP
AWHPWL

hide sequence

RefSeq Acc Id:	XP_038945102 ⟸ XM_039089174
- Peptide Label:	isoform X19
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945101 ⟸ XM_039089173
- Peptide Label:	isoform X18
- UniProtKB:	A0A8I5Y6J8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945090 ⟸ XM_039089162
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945096 ⟸ XM_039089168
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I5Y6J8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945087 ⟸ XM_039089159
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945100 ⟸ XM_039089172
- Peptide Label:	isoform X17
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127193 ⟸ XM_063271123
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127202 ⟸ XM_063271132
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127198 ⟸ XM_063271128
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127195 ⟸ XM_063271125
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127194 ⟸ XM_063271124
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127204 ⟸ XM_063271134
- Peptide Label:	isoform X16
- UniProtKB:	A0A8I5Y6J8 (UniProtKB/TrEMBL), A0A8I6AL99 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127197 ⟸ XM_063271127
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127203 ⟸ XM_063271133
- Peptide Label:	isoform X15
- UniProtKB:	A0A8I5Y6J8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127196 ⟸ XM_063271126
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127201 ⟸ XM_063271131
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I5Y6J8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127192 ⟸ XM_063271122
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127200 ⟸ XM_063271130
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I5Y6J8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127189 ⟸ XM_063271119
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127191 ⟸ XM_063271121
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GLC1 (UniProtKB/TrEMBL)

Protein Domains

FAT FATC PI3K/PI4K catalytic

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305446	AgrOrtholog
BioCyc Gene	G2FUF-20048	BioCyc
Ensembl Genes	ENSRNOG00000025244	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000030545	ENTREZGENE
	ENSRNOT00000030545.8	UniProtKB/TrEMBL
	ENSRNOT00000076323	ENTREZGENE
	ENSRNOT00000076323.3	UniProtKB/TrEMBL
	ENSRNOT00000091346	ENTREZGENE
	ENSRNOT00000091346.2	UniProtKB/TrEMBL
	ENSRNOT00000166774	ENTREZGENE
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	DDR_Repair_Kinase	UniProtKB/TrEMBL
	FATC_dom	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	PI3/4_kinase_cat_dom	UniProtKB/TrEMBL
	PIK-rel_kinase_FAT	UniProtKB/TrEMBL
	PIK_FAT	UniProtKB/TrEMBL
	Tra1_central	UniProtKB/TrEMBL
	Tra1_ring	UniProtKB/TrEMBL
NCBI Gene	288471	ENTREZGENE
PANTHER	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	UniProtKB/TrEMBL
	PTHR11139:SF1	UniProtKB/TrEMBL
Pfam	FAT	UniProtKB/TrEMBL
	PI3_PI4_kinase	UniProtKB/TrEMBL
	Tra1_central	UniProtKB/TrEMBL
	Tra1_ring	UniProtKB/TrEMBL
PhenoGen	Trrap	PhenoGen
PROSITE	FAT	UniProtKB/TrEMBL
	FATC	UniProtKB/TrEMBL
	PI3_4_KINASE_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000025244	RatGTEx
SMART	FATC	UniProtKB/TrEMBL
	PI3Kc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
	SSF56112	UniProtKB/TrEMBL
UniProt	A0A8I5Y6J8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AL99	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GLC1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Trrap	transformation/transcription domain-associated protein	Trrap_predicted	transformation/transcription domain-associated protein (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Trrap_predicted	transformation/transcription domain-associated protein (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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