ONTOLOGY REPORT - ANNOTATIONS |
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Term: | rRNA catabolic process |
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Accession: | GO:0016075
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browse the term
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Definition: | The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes. |
Synonyms: | exact_synonym: | rRNA breakdown; rRNA catabolism; rRNA degradation |
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G |
AC118772.1 |
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involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
Ensembl chr10:68,067,119...68,089,948
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G |
Dis3 |
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease |
involved_in |
ISO IBA |
(PMID:20368444) GO_REF:0000033 |
RGD GO_Central |
PMID:20368444 |
GO_REF:0000033 |
NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642
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G |
Dis3l |
DIS3-like exosome 3'-5' exoribonuclease |
involved_in |
ISO IBA |
(PMID:20368444), (PMID:20531389) GO_REF:0000033 |
RGD GO_Central |
PMID:20368444 PMID:20531389 |
GO_REF:0000033 |
NCBI chr 8:64,803,925...64,840,306
Ensembl chr 8:64,803,927...64,840,165
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G |
Ern2 |
endoplasmic reticulum to nucleus signaling 2 |
involved_in |
ISO |
(PMID:11175748) |
RGD |
PMID:11175748 |
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NCBI chr 1:176,726,454...176,743,289
Ensembl chr 1:176,726,454...176,743,289
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G |
Exosc4 |
exosome component 4 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573
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G |
Exosc5 |
exosome component 5 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265
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G |
Exosc6 |
exosome component 6 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515
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G |
Exosc7 |
exosome component 7 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
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G |
Exosc8 |
exosome component 8 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
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G |
Exosc9 |
exosome component 9 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
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G |
Slfn14 |
schlafen family member 14 |
involved_in |
ISO |
(PMID:25996083) |
RGD |
PMID:25996083 |
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NCBI chr10:68,076,326...68,087,794
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G |
Slfn4 |
schlafen family member 4 |
involved_in |
ISO |
(PMID:34272366), (PMID:35104454) |
RGD |
PMID:34272366 PMID:35104454 |
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NCBI chr10:67,994,601...68,018,141
Ensembl chr10:68,000,028...68,018,138 Ensembl chr10:68,000,028...68,018,138
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G |
Slfn9 |
schlafen family member 9 |
involved_in |
IDA |
PMID:29563550 |
UniProt |
PMID:29563550 |
RGD:13601999 |
NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383
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G |
Trir |
telomerase RNA component interacting RNase |
involved_in |
ISO |
(PMID:28322335) |
RGD |
PMID:28322335 |
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NCBI chr19:23,125,083...23,128,502
Ensembl chr19:23,125,083...23,128,510
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G |
Xrn1 |
5'-3' exoribonuclease 1 |
involved_in |
ISO IBA |
(PMID:20368444) GO_REF:0000033 |
RGD GO_Central |
PMID:20368444 |
GO_REF:0000033 |
NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G |
Pelo |
pelota mRNA surveillance and ribosome rescue factor |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:46,797,853...46,799,621
Ensembl chr 2:46,797,853...46,799,746
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Symbol |
Object Name |
Qualifiers |
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G |
Ddx49 |
DEAD-box helicase 49 |
involved_in |
ISO |
(PMID:29618122) |
RGD |
PMID:29618122 |
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NCBI chr16:19,125,388...19,133,042
Ensembl chr16:19,125,384...19,133,616
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Term paths to the root
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