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ONTOLOGY REPORT - ANNOTATIONS


Term:macromolecule catabolic process
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Accession:GO:0009057 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
Synonyms:exact_synonym: biopolymer catabolic process;   macromolecule breakdown;   macromolecule catabolism;   macromolecule degradation
 narrow_synonym: multicellular organismal macromolecule catabolic process
 related_synonym: cellular macromolecule catabolic process;   cellular macromolecule catabolism;   cellular macromolecule degradation
 alt_id: GO:0043285;   GO:0044266



show annotations for term's descendants           Sort by:
macromolecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln6 CLN6, transmembrane ER protein acts_upstream_of_or_within ISO MGI:2159328 (PMID:15647513) RGD PMID:15647513 NCBI chr 8:63,303,356...63,318,360 JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO MGI:1856959 (PMID:15647513) RGD PMID:15647513 NCBI chr16:74,749,662...74,759,553 JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within ISO MGI:2176390 (PMID:15647513) RGD PMID:15647513 NCBI chr 5:135,121,164...135,142,048 JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:26489465)
GO_REF:0000024
RGD
UniProt
PMID:26489465 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577 JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) RGD PMID:28297718 NCBI chr18:28,378,692...28,381,316 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP RGD PMID:20805360 RGD:10042974 NCBI chr14:9,918,630...9,938,072 JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO
ISS
(PMID:16126846), (PMID:28275056)
GO_REF:0000024
RGD
UniProt
PMID:16126846 PMID:28275056 GO_REF:0000024 NCBI chr 9:1,862,555...1,872,403 JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:192,292,041...192,315,142 JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO
IBA
(PMID:29180010)
(PMID:27616329)
GO_REF:0000033
RGD
GO_Central
PMID:27616329 PMID:29180010 GO_REF:0000033 NCBI chr 5:172,087,524...172,095,566 JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) RGD PMID:24375645 NCBI chr17:18,275,681...18,288,231 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:26000482) RGD PMID:26000482 NCBI chr13:73,174,075...73,245,762 JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) RGD PMID:28335005 NCBI chr 5:164,330,452...164,348,435 JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) RGD PMID:23125361 NCBI chr 8:114,193,439...114,250,807 JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr16:19,076,594...19,097,365 JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19322177), (PMID:23185455), (PMID:26000482), (PMID:26134560)
(PMID:19909337)
UniProt
GO_Central
RGD
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:142,661,193...142,670,051 JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in ISO (PMID:26134560) RGD PMID:26134560 NCBI chr 1:2,313,110...2,348,820 JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS
(PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499)
(PMID:17288565), (PMID:22701344), (PMID:27193233)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... GO_REF:0000024 GO_REF:0000104 NCBI chr 1:92,796,628...92,799,108 JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20622884), (PMID:22701344), (PMID:24700863), (PMID:24733888), (PMID:27102483)
(PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)
UniProt
RGD
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000024 NCBI chr 6:98,930,705...98,935,748 JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:25106868)
(PMID:20622884), (PMID:22701344)
RGD PMID:20622884 PMID:22701344 PMID:25106868 NCBI chr 6:16,242,622...16,246,662 JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA
(PMID:22547059)
GO_REF:0000033
RGD
GO_Central
PMID:22547059 GO_REF:0000033 NCBI chr13:102,509,111...102,529,501 JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,734,890...56,859,917 JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:10,695,593...10,712,330 JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 NCBI chr12:2,640,936...2,684,787 JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543 JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO
IBA
(PMID:12456657)
GO_REF:0000033
RGD
GO_Central
PMID:12456657 GO_REF:0000033 NCBI chr17:6,507,728...6,510,385 JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:24,779,593...24,809,213 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:45,066,027...45,112,326 JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:127,952,161...127,956,230 JBrowse link
G Nicol1 NELL2 interacting cell ontogeny regulator 1 involved_in ISO (PMID:38625739) RGD PMID:38625739 NCBI chr14:76,768,145...76,769,661 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:9,842,574...9,852,332 JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19508861)
Ensembl
RGD
PMID:19508861 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571 JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,577...161,814,381 JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127)
(PMID:29844590)
RGD PMID:29844590 PMID:34160127 NCBI chr14:42,407,226...42,545,304 JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:164,330,452...164,348,435 JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:41,789,557...41,805,903 JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS
(PMID:15014438)
GO_REF:0000024
RGD
UniProt
PMID:15014438 GO_REF:0000024 NCBI chr 1:92,796,628...92,799,108 JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin IMP RGD PMID:28859281 RGD:13464336 NCBI chr 7:120,636,581...120,644,474 JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 involved_in ISO
IBA
(PMID:29033132)
GO_REF:0000033
RGD
GO_Central
PMID:29033132 GO_REF:0000033 NCBI chr 3:115,850,117...115,930,259 JBrowse link
G Anapc10 anaphase promoting complex subunit 10 involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr19:28,152,299...28,205,552 JBrowse link
G Anapc11 anaphase promoting complex subunit 11 involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr10:106,373,610...106,384,633 JBrowse link
G Anapc13 anaphase promoting complex subunit 13 involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr 8:103,205,520...103,213,936 JBrowse link
G Anapc15 anaphase promoting complex subunit 15 involved_in ISO
IEA
ISS
(PMID:29033132)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:29033132 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:156,238,640...156,266,005 JBrowse link
G Anapc16 anaphase promoting complex subunit 16 involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr20:27,927,334...27,941,644 JBrowse link
G Anapc2 anaphase promoting complex subunit 2 involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr 3:28,484,590...28,496,338 JBrowse link
G Anapc4 anaphase promoting complex subunit 4 involved_in ISO
IBA
(PMID:29033132)
GO_REF:0000033
RGD
GO_Central
PMID:29033132 GO_REF:0000033 NCBI chr14:58,125,995...58,159,253 JBrowse link
G Anapc5 anaphase-promoting complex subunit 5 involved_in ISO
IBA
IEA
ISS
(PMID:29033132)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:29033132 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:39,409,519...39,442,518 JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr12:34,131,214...34,160,819 JBrowse link
G Cdc16 cell division cycle 16 involved_in ISO
IBA
(PMID:29033132)
GO_REF:0000033
RGD
GO_Central
PMID:29033132 GO_REF:0000033 NCBI chr16:75,773,026...75,796,586 JBrowse link
G Cdc20 cell division cycle 20 involved_in ISO
IBA
IEA
(PMID:17443180)
GO_REF:0000033
GO_REF:0000107
(PMID:18753608)
RGD
GO_Central
Ensembl
PMID:17443180 PMID:18753608 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:137,251,596...137,255,799 JBrowse link
G Cdc23 cell division cycle 23 involved_in ISO
IBA
(PMID:29033132)
GO_REF:0000033
RGD
GO_Central
PMID:29033132 GO_REF:0000033 NCBI chr18:26,236,891...26,260,611 JBrowse link
G Cdc26 cell division cycle 26 involved_in ISO
ISS
(PMID:29033132)
GO_REF:0000024
RGD
UniProt
PMID:29033132 GO_REF:0000024 NCBI chr 5:75,844,852...75,859,830 JBrowse link
G Cdc27 cell division cycle 27 involved_in ISO
IBA
IEA
ISS
(PMID:29033132)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:29033132 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:89,400,720...89,449,816 JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10500095)
GO_REF:0000107
RGD
Ensembl
PMID:10500095 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428 JBrowse link
G Ecrg4 ECRG4 augurin precursor involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:20404145)
GO_Central
RGD
PMID:20404145 GO_REF:0000033 NCBI chr 9:45,992,954...46,012,605 JBrowse link
G Fbxo31 F-box protein 31 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19412162)
UniProt
Ensembl
RGD
PMID:19412162 GO_REF:0000024 GO_REF:0000107 NCBI chr19:49,624,813...49,656,052 JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO
IBA
(PMID:18753608)
GO_REF:0000033
(PMID:14701726), (PMID:18662541), (PMID:21596315)
RGD
GO_Central
PMID:14701726 PMID:18662541 PMID:18753608 PMID:21596315 GO_REF:0000033 NCBI chr 7:8,332,029...8,343,953 JBrowse link
G LOC103692897 anaphase-promoting complex subunit CDC26 pseudogene involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:73,462,396...73,462,806 JBrowse link
G Ube2c ubiquitin-conjugating enzyme E2C involved_in ISO
IBA
(PMID:19822757), (PMID:9122200)
GO_REF:0000033
RGD
GO_Central
PMID:9122200 PMID:19822757 GO_REF:0000033 NCBI chr 3:173,925,975...173,928,375 JBrowse link
G Ube2s ubiquitin-conjugating enzyme E2S involved_in ISS
ISO
GO_REF:0000024
(PMID:19820702), (PMID:19822757)
UniProt
RGD
PMID:19820702 PMID:19822757 GO_REF:0000024 NCBI chr 1:69,028,853...69,032,914 JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cck cholecystokinin IDA pancreatic acinar cells RGD PMID:11964411 RGD:625521 NCBI chr 8:121,153,499...121,160,194 JBrowse link
G Dffa DNA fragmentation factor subunit alpha involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:159,540,715...159,553,639 JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
IDA
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000002
(PMID:15572351)
(PMID:22253444)
GO_REF:0000107
GO_Central
InterPro
RGD
Ensembl
PMID:15572351 PMID:22253444 PMID:11425895 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:628524 NCBI chr 5:169,804,873...169,817,157 JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:123,627,529...123,692,278 JBrowse link
G Dnase1l3 deoxyribonuclease 1L3 acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
(PMID:12050166)
GO_REF:0000033
(PMID:23229555)
RGD
GO_Central
PMID:12050166 PMID:23229555 PMID:9665719 GO_REF:0000033, RGD:728743 NCBI chr15:19,351,683...19,378,536 JBrowse link
G Dnase2 deoxyribonuclease 2, lysosomal involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr19:23,244,656...23,247,376 JBrowse link
G Dnase2b deoxyribonuclease 2 beta involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr 2:235,470,915...235,515,211 JBrowse link
G Endog endonuclease G acts_upstream_of_or_within ISO MGI:3034030|MGI:3514265 (PMID:14663139) RGD PMID:14663139 NCBI chr 3:13,449,113...13,451,715 JBrowse link
G Exog exo/endonuclease G involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:128,062,688...128,082,529 JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:16153597) RGD PMID:16153597 NCBI chr 8:99,512,971...99,514,500 JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO
GO_REF:0000107
MGI:1857091 (PMID:11403940)
Ensembl
RGD
PMID:11403940 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871 JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nemf nuclear export mediator factor involved_in ISO (PMID:33406423), (PMID:33909987)
(PMID:33909987)
RGD PMID:33406423 PMID:33909987 NCBI chr 6:93,527,690...93,571,863 JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr20:49,380,835...49,471,826 JBrowse link
G Atg7 autophagy related 7 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 4:149,390,000...149,597,534 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 6:135,523,604...135,529,687 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 9:22,930,249...22,935,929 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within
IDA
IGI
PMID:18644871 ParkinsonsUK-UCL
MGI
PMID:18644871 PMID:18644871 RGD:10412301, RGD:10412301 NCBI chr 8:50,080,514...50,084,376 JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:11082038
UniProtKB:P13473 (PMID:18644871), (PMID:27628032)
(PMID:18579532)
(PMID:36586411)
(PMID:24880125), (PMID:27628032)
(PMID:8662539)
RGD PMID:8662539 PMID:18579532 PMID:18644871 PMID:24880125 PMID:27628032 More... RGD:1581607 NCBI chr  X:122,038,734...122,087,745 JBrowse link
G Synpo2 synaptopodin 2 involved_in IMP PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 2:211,217,099...211,371,267 JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,641,802...45,649,787 JBrowse link
G Chi3l3 chitinase 3-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:193,808,135...193,825,511 JBrowse link
G Chia chitinase, acidic involved_in IDA
IBA
ISO
IEA
ISS
GO_REF:0000033
(PMID:11085997)
GO_REF:0000117
(PMID:19435888)
GO_REF:0000024
GO_Central
RGD
UniProt
PMID:11085997 PMID:19435888 PMID:11085997 GO_REF:0000024 GO_REF:0000033 GO_REF:0000117, RGD:5000759 NCBI chr 2:196,302,687...196,344,849 JBrowse link
G Chial1 chitinase acidic-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:193,858,038...193,879,133 JBrowse link
G Chit1 chitinase 1 involved_in ISO
IBA
(PMID:19725875)
GO_REF:0000033
RGD
GO_Central
PMID:19725875 GO_REF:0000033 NCBI chr13:48,117,886...48,165,645 JBrowse link
G Ctbs chitobiase involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:2751306 GO_REF:0000033, RGD:2301430 NCBI chr 2:235,340,520...235,355,091 JBrowse link
G ENSRNOG00000067768 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gusb glucuronidase, beta involved_in ISO MGI:1856041 (PMID:23897660) RGD PMID:23897660 NCBI chr12:32,337,281...32,350,838 JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA
ISO
GO_REF:0000107
MGI:2429701 (PMID:22451654)
Ensembl
RGD
PMID:22451654 GO_REF:0000107 NCBI chr 2:28,483,997...28,504,165 JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA
ISO
GO_REF:0000107
MGI:2658730 (PMID:22451654)
Ensembl
RGD
PMID:22451654 GO_REF:0000107 NCBI chr 8:108,250,668...108,254,519 JBrowse link
G Hyal4 hyaluronidase 4 acts_upstream_of_or_within ISO (PMID:23086929) RGD PMID:23086929 NCBI chr 4:53,256,179...53,274,819 JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA
(PMID:11051545)
GO_REF:0000107
RGD
Ensembl
PMID:11051545 GO_REF:0000107 NCBI chr 2:190,546,015...190,582,787 JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,918,630...9,938,072 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
GO_REF:0000107
(PMID:19029303)
Ensembl
RGD
PMID:19029303 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580 JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19029303), (PMID:29476152)
UniProt
GO_Central
RGD
PMID:19029303 PMID:29476152 GO_REF:0000024 GO_REF:0000033 NCBI chr10:80,908,300...80,951,097 JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO
IBA
(PMID:29476152)
GO_REF:0000033
RGD
GO_Central
PMID:29476152 GO_REF:0000033 NCBI chr11:92,378,908...92,478,893 JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO
IBA
(PMID:29476152)
GO_REF:0000033
RGD
GO_Central
PMID:29476152 GO_REF:0000033 NCBI chr 4:79,391,367...79,525,923 JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731 JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:53,255,916...53,282,965 JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
IEA
(PMID:11051545), (PMID:19029303)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11051545 PMID:19029303 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:98,282,358...98,315,412 JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19029303)
UniProt
RGD
PMID:19029303 GO_REF:0000024 NCBI chr 5:138,167,444...138,188,155 JBrowse link
cytoplasm protein quality control term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO
ISS
(PMID:29033132)
GO_REF:0000024
RGD
UniProt
PMID:29033132 GO_REF:0000024 NCBI chr 5:156,919,029...157,027,127 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr 7:69,115,216...69,224,843 JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:29033132) RGD PMID:29033132 NCBI chr 5:62,005,984...62,025,387 JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) RGD PMID:24981174 NCBI chr 7:9,939,359...9,946,963 JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO
IEA
ISS
(PMID:29033132)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:29033132 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:156,919,029...157,027,127 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO
IEA
ISS
(PMID:29033132)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:29033132 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:69,115,216...69,224,843 JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in
acts_upstream_of_or_within
ISO (PMID:31439799)
MGI:109382 (PMID:18625844)
RGD PMID:18625844 PMID:31439799 NCBI chr16:51,775,416...51,794,581 JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,663,437...5,708,623 JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:152,358,267...152,395,747 JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:36,750,732...36,787,067 JBrowse link
G Dcps decapping enzyme, scavenger involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
GO_REF:0000104
InterPro
GO_Central
UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:41,729,507...41,782,222 JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:66,277,345...66,288,852 JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO MGI:1298230 (PMID:18625844) RGD PMID:18625844 NCBI chr 2:137,422,074...137,442,282 JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (PMID:18625844) RGD PMID:18625844 NCBI chr12:12,512,835...12,637,066 JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO
IBA
IEA
ISS
(PMID:20584987), (PMID:20852261)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:20584987 PMID:20852261 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:218,255,801...218,287,662 JBrowse link
G Patl2 PAT1 homolog 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,072,958...109,087,425 JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 8:33,415,666...33,465,319 JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,663,437...5,708,623 JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:152,358,267...152,395,747 JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,106,147...58,151,685 JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr19:33,774,062...33,786,054 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO MGI:3800577 (PMID:24240681) RGD PMID:24240681 NCBI chr 2:25,002,210...25,162,675 JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO MGI:96074 (PMID:11707436) RGD PMID:11707436 NCBI chr 8:59,936,526...59,961,654 JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA
ISO
GO_REF:0000107
MGI:96073 (PMID:11707436)
Ensembl
RGD
PMID:11707436 GO_REF:0000107 NCBI chr 2:28,483,997...28,504,165 JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO MGI:5439833 (PMID:30064964) RGD PMID:30064964 NCBI chr  X:149,025,976...149,046,641 JBrowse link
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within
ISO (PMID:24036510)
MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:25854773)
MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:19834056)
RGD PMID:19751987 PMID:19834056 PMID:24036510 PMID:25854773 NCBI chr14:1,031,588...1,059,494 JBrowse link
dextrin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgam maltase-glucoamylase involved_in ISO (PMID:18036614) RGD PMID:18036614 NCBI chr 4:69,441,626...69,602,068 JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IEA
(PMID:1627644)
GO_REF:0000107
RGD
Ensembl
PMID:1627644 GO_REF:0000107 NCBI chr15:24,144,595...24,146,785 JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO (PMID:19944011) RGD PMID:19944011 NCBI chr 5:169,804,873...169,817,157 JBrowse link
G Dnase1 deoxyribonuclease 1 involved_in ISS
ISO
IBA
PMID:29191910
(PMID:29191910)
GO_REF:0000033
RGD
GO_Central
PMID:29191910 PMID:29191910 GO_REF:0000033, RGD:13464261 NCBI chr10:11,498,930...11,505,151 JBrowse link
G Dnase1l1 deoxyribonuclease 1-like 1 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr  X:152,056,942...152,065,518 JBrowse link
G Dnase1l2 deoxyribonuclease 1 like 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:5308556 (PMID:21307874)
GO_Central
RGD
PMID:21307874 GO_REF:0000033 NCBI chr10:13,471,850...13,473,447 JBrowse link
G Dnase1l3 deoxyribonuclease 1L3 involved_in ISS
ISO
IEA
PMID:29191910
(PMID:29191910)
GO_REF:0000002
RGD
InterPro
PMID:29191910 PMID:29191910 GO_REF:0000002, RGD:13464261 NCBI chr15:19,351,683...19,378,536 JBrowse link
G Dnase2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within ISO MGI:2449811 (PMID:15568025), (PMID:18991290) RGD PMID:15568025 PMID:18991290 NCBI chr19:23,244,656...23,247,376 JBrowse link
G Fbh1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) RGD PMID:23361013 NCBI chr17:66,749,506...66,787,590 JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in ISO
IBA
(PMID:11401564)
GO_REF:0000033
RGD
GO_Central
PMID:11401564 GO_REF:0000033 NCBI chr 1:142,234,729...142,246,403 JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23361013)
GO_REF:0000104
RGD
UniProt
PMID:23361013 GO_REF:0000104 NCBI chr 1:202,790,295...202,796,008 JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in ISO
IBA
(PMID:21602889)
GO_REF:0000033
RGD
GO_Central
PMID:21602889 GO_REF:0000033 NCBI chr 3:10,280,654...10,291,003 JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:20521842), (PMID:21491884), (PMID:24573677) RGD PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr 4:141,046,058...141,058,183 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3052754|MGI:5751220 (PMID:18724932), (PMID:19923437), (PMID:20871604), (PMID:23993650), (PMID:25848017)
GO_REF:0000033
RGD
GO_Central
PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 GO_REF:0000033 NCBI chr 8:118,585,082...118,586,382 JBrowse link
G Trex2 three prime repair exonuclease 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:151,151,862...151,153,470 JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,652...25,690,598 JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in ISO (PMID:18995831) RGD PMID:18995831 NCBI chr 1:216,270,016...216,274,873 JBrowse link
G Rnaseh1 ribonuclease H1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:45,282,849...45,292,258 JBrowse link
G Rnaseh2a ribonuclease H2, subunit A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:40,091,206...40,100,904 JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin like elastase 1 acts_upstream_of_or_within ISO (PMID:24793170) RGD PMID:24793170 NCBI chr 7:131,773,161...131,786,300 JBrowse link
G Ctsl cathepsin L involved_in ISS
ISO
GO_REF:0000024
(PMID:12417635)
UniProt
RGD
PMID:12417635 GO_REF:0000024 NCBI chr17:770,104...776,266 JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO
IEA
(PMID:29101312)
GO_REF:0000107
RGD
Ensembl
PMID:29101312 GO_REF:0000107 NCBI chr 8:4,581,785...4,591,687 JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:18272684)
(PMID:16282324)
RGD PMID:16282324 PMID:18272684 NCBI chr 4:120,461,966...120,510,756 JBrowse link
G Snx5 sorting nexin 5 IDA RGD PMID:16487940 RGD:13508623 NCBI chr 3:152,075,258...152,094,508 JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor involved_in ISO (PMID:11724934), (PMID:16168377), (PMID:17872946), (PMID:24810856) RGD PMID:11724934 PMID:16168377 PMID:17872946 PMID:24810856 NCBI chr19:10,996,705...11,032,260 JBrowse link
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:76,688,194...76,695,162 JBrowse link
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in IBA
IEA
ISO
ISS
GO_REF:0000033
GO_REF:0000002
(PMID:21857022), (PMID:23223569)
GO_REF:0000024
GO_Central
InterPro
RGD
UniProt
PMID:21857022 PMID:23223569 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:115,560,274...115,563,346 JBrowse link
G Bag6 BAG cochaperone 6 involved_in IBA
ISO
ISS
IEA
GO_REF:0000033
(PMID:23129660), (PMID:24981174), (PMID:26565908)
GO_REF:0000024
GO_REF:0000107
GO_Central
RGD
UniProt
Ensembl
PMID:23129660 PMID:24981174 PMID:26565908 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:3,675,938...3,690,414 JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO
IEA
(PMID:23907667)
GO_REF:0000107
RGD
Ensembl
PMID:23907667 GO_REF:0000107 NCBI chr 1:206,465,040...206,518,156 JBrowse link
G Calr calreticulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:40,213,367...40,218,262 JBrowse link
G Calr3 calreticulin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:17,396,064...17,423,166 JBrowse link
G Calr4 calreticulin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:123,986,870...124,022,436 JBrowse link
G Canx calnexin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:35,124,941...35,157,954 JBrowse link
G Ccdc47 coiled-coil domain containing 47 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:25009997)
MGI:3722141 (PMID:25009997)
GO_REF:0000024
RGD
UniProt
PMID:25009997 GO_REF:0000024 NCBI chr10:91,630,101...91,648,626 JBrowse link
G Clgn calmegin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:24,695,140...24,728,542 JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:15215856), (PMID:17872946), (PMID:18555783), (PMID:24089527), (PMID:25239945) RGD PMID:15215856 PMID:17872946 PMID:18555783 PMID:24089527 PMID:25239945 NCBI chr 7:89,404,413...89,427,095 JBrowse link
G Derl2 derlin 2 involved_in ISO
IBA
(PMID:16449189)
GO_REF:0000033
RGD
GO_Central
PMID:16449189 GO_REF:0000033 NCBI chr10:55,727,764...55,739,442 JBrowse link
G Derl3 derlin 3 involved_in ISO
IBA
(PMID:22607976)
GO_REF:0000033
RGD
GO_Central
PMID:22607976 GO_REF:0000033 NCBI chr20:12,754,490...12,768,454 JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 involved_in ISO (PMID:21148293), (PMID:21150129) RGD PMID:21148293 PMID:21150129 NCBI chr20:27,828,216...27,846,428 JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) RGD PMID:15936278 NCBI chr 9:76,731,060...76,739,278 JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:22267725)
(PMID:18400946)
UniProt
GO_Central
RGD
PMID:18400946 PMID:22267725 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:66,997,842...67,007,371 JBrowse link
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 involved_in ISS
ISO
GO_REF:0000024
(PMID:18653895), (PMID:21329881)
(PMID:18400946)
UniProt
RGD
PMID:18400946 PMID:18653895 PMID:21329881 GO_REF:0000024 NCBI chr 3:65,232,031...65,272,732 JBrowse link
G Ecpas Ecm29 proteasome adaptor and scaffold involved_in IBA
ISO
GO_REF:0000033
(PMID:15496406)
GO_Central
RGD
PMID:15496406 GO_REF:0000033 NCBI chr 5:73,601,745...73,714,026 JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:21062743), (PMID:25092655)
(PMID:11375934)
RGD PMID:11375934 PMID:21062743 PMID:25092655 NCBI chr 4:141,797,631...141,829,717 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:15537790), (PMID:25092655) RGD PMID:15537790 PMID:25092655 NCBI chr 3:144,201,604...144,227,423 JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO (PMID:25092655)
(PMID:16431915)
RGD PMID:16431915 PMID:25092655 NCBI chr13:63,858,282...63,920,538 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:17707796) RGD PMID:17707796 NCBI chr 4:104,363,838...104,425,271 JBrowse link
G ENSRNOG00000066502 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000069918 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000070059 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000070668 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:18502753) RGD PMID:18502753 NCBI chr14:108,856,661...108,894,511 JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:19240031) RGD PMID:19240031 NCBI chr 1:242,921,147...242,956,472 JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:19240031) RGD PMID:19240031 NCBI chr16:65,017,654...65,034,184 JBrowse link
G Faf1 Fas associated factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:124,426,032...124,790,014 JBrowse link
G Faf2 Fas associated factor family member 2 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:24215460)
UniProt
GO_Central
RGD
PMID:24215460 GO_REF:0000024 GO_REF:0000033 NCBI chr17:9,947,211...9,989,474 JBrowse link
G Fbxo17 F-box protein 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:84,002,276...84,024,455 JBrowse link
G Fbxo2 F-box protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:15723043)
GO_Central
RGD
PMID:15723043 GO_REF:0000033 NCBI chr 5:163,876,079...163,881,508 JBrowse link
G Fbxo27 F-box protein 27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,965,426...83,987,781 JBrowse link
G Fbxo44 F-box protein 44 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:163,866,517...163,875,928 JBrowse link
G Fbxo6 F-box protein 6 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:12939278), (PMID:21062743)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:12939278 PMID:21062743 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:163,859,909...163,865,693 JBrowse link
G Foxred2 FAD-dependent oxidoreductase domain containing 2 involved_in IBA
ISO
GO_REF:0000033
(PMID:19706418)
GO_Central
RGD
PMID:19706418 GO_REF:0000033 NCBI chr 7:109,521,761...109,538,300 JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in ISO (PMID:21636303) RGD PMID:21636303 NCBI chr12:15,377,009...15,394,238 JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:28827405) RGD PMID:28827405 NCBI chr19:10,604,360...10,624,168 JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in
NOT|involved_in
ISS
ISO
IBA
GO_REF:0000024
(PMID:24899641)
(PMID:18264092)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:18264092 PMID:24899641 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:22,997,962...23,012,293 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:38,453,016...38,457,475 JBrowse link
G Jkamp JNK1/MAPK8-associated membrane protein involved_in IBA
ISO
GO_REF:0000033
(PMID:19269966)
GO_Central
RGD
PMID:19269966 GO_REF:0000033 NCBI chr 6:90,648,043...90,661,985 JBrowse link
G Jkampl JNK1/MAPK8 associated membrane protein like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:105,520,442...105,521,542 JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 involved_in ISO
IBA
(PMID:27108681)
GO_REF:0000033
RGD
GO_Central
PMID:27108681 GO_REF:0000033 NCBI chr20:33,202,509...33,385,747 JBrowse link
G Man1a2 mannosidase, alpha, class 1A, member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:187,947,484...188,096,332 JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:18003979), (PMID:21062743)
GO_REF:0000033
(PMID:15294975)
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15294975 PMID:18003979 PMID:21062743 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:28,539,778...28,563,155 JBrowse link
G Man1c1 mannosidase, alpha, class 1C, member 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:146,774,282...146,913,257 JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:82,455,686...82,532,917 JBrowse link
G Nccrp1 NCCRP1, F-box associated domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,835,083...83,838,620 JBrowse link
G Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:90,480,948...90,487,367 JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in IDA
ISO
PMID:12847084
(PMID:12847084)
RGD PMID:12847084 PMID:12847084 RGD:10047330 NCBI chr10:105,654,395...105,709,958 JBrowse link
G Os9 OS9, endoplasmic reticulum lectin involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18264092), (PMID:18417469), (PMID:19346256), (PMID:24899641)
GO_REF:0000104
UniProt
RGD
PMID:18264092 PMID:18417469 PMID:19346256 PMID:24899641 GO_REF:0000024 GO_REF:0000104 NCBI chr 7:62,915,498...62,957,591 JBrowse link
G Rcn3 reticulocalbin 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:26252542)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26252542 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,700,969...104,710,228 JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:22795130)
UniProt
RGD
PMID:22795130 GO_REF:0000024 NCBI chr 9:83,630,037...83,748,690 JBrowse link
G Rnf103 ring finger protein 103 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:18675248)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:18675248 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:103,526,456...103,542,529 JBrowse link
G Rnf121 ring finger protein 121 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:156,377,368...156,439,936 JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO
IBA
(PMID:25239945)
GO_REF:0000033
RGD
GO_Central
PMID:25239945 GO_REF:0000033 NCBI chr 7:90,439,726...90,450,911 JBrowse link
G Rnf145 ring finger protein 145 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:29,006,391...29,050,788 JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO
IBA
IEA
UniProtKB:Q99942 (PMID:24019521)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:24019521 GO_REF:0000033 GO_REF:0000107 NCBI chr14:78,292,517...78,329,832 JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO
IBA
(PMID:19269966), (PMID:24019521)
GO_REF:0000033
RGD
GO_Central
PMID:19269966 PMID:24019521 GO_REF:0000033 NCBI chr20:4,145,539...4,147,985 JBrowse link
G Sdf2l1 stromal cell-derived factor 2-like 1 acts_upstream_of_or_within IMP PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chr11:97,376,878...97,379,120 JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in ISO (PMID:8945469) RGD PMID:8945469 NCBI chr 5:66,569,184...66,577,394 JBrowse link
G Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:25066055)
GO_REF:0000033
(PMID:21454652), (PMID:26471130)
UniProt
Ensembl
RGD
GO_Central
PMID:21454652 PMID:25066055 PMID:26471130 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:110,735,450...110,779,695 JBrowse link
G Sel1l2 SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:127,586,031...127,713,857 JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:15215856) RGD PMID:15215856 NCBI chr 1:119,659,779...119,669,546 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23129660)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23129660 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,653,681...8,670,460 JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B involved_in ISO (PMID:22607976) RGD PMID:22607976 NCBI chr 8:114,928,678...114,994,027 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:23990462) RGD PMID:23990462 NCBI chr10:14,850,765...14,853,046 JBrowse link
G Syvn1 synoviolin 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:12459480), (PMID:14593114), (PMID:17059562), (PMID:22590560), (PMID:22607976), (PMID:26471130), (PMID:28827405)
GO_REF:0000033
(PMID:21454652)
(PMID:21245296)
RGD
GO_Central
PMID:12459480 PMID:14593114 PMID:17059562 PMID:21245296 PMID:21454652 More... GO_REF:0000033 NCBI chr 1:203,339,235...203,346,137 JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase involved_in ISO (PMID:24807418) RGD PMID:24807418 NCBI chr14:77,065,391...77,070,871 JBrowse link
G Tmem67 transmembrane protein 67 involved_in IEA
ISO
GO_REF:0000107
(PMID:19815549)
Ensembl
RGD
PMID:19815549 GO_REF:0000107 NCBI chr 5:30,333,793...30,386,702 JBrowse link
G Tmub1 transmembrane and ubiquitin-like domain containing 1 involved_in IEA
ISO
IBA
GO_REF:0000107
GO_REF:0000002
(PMID:21343306)
GO_REF:0000033
Ensembl
InterPro
RGD
GO_Central
PMID:21343306 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:10,729,494...10,732,060 JBrowse link
G Tmub2 transmembrane and ubiquitin-like domain containing 2 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000002
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr10:87,238,543...87,242,968 JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(PMID:17200151)
UniProt
RGD
PMID:17200151 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704 JBrowse link
G Trim13 tripartite motif-containing 13 involved_in IEA
ISO
IBA
GO_REF:0000107
(PMID:17314412)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:17314412 GO_REF:0000033 GO_REF:0000107 NCBI chr15:39,909,587...39,948,719 JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:24810856) RGD PMID:24810856 NCBI chr10:74,310,024...74,328,473 JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:22607976)
GO_REF:0000033
(PMID:11278356)
RGD
GO_Central
PMID:11278356 PMID:22607976 GO_REF:0000033 NCBI chr20:10,983,734...11,005,468 JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24020373)
(PMID:22607976)
(PMID:21245296)
GO_Central
RGD
PMID:21245296 PMID:22607976 PMID:24020373 GO_REF:0000033 NCBI chr 5:52,218,807...52,237,805 JBrowse link
G Ube2j2 ubiquitin-conjugating enzyme E2, J2 involved_in ISO
IBA
(PMID:24807418)
GO_REF:0000033
RGD
GO_Central
PMID:24807418 GO_REF:0000033 NCBI chr 5:171,815,607...171,830,037 JBrowse link
G Ube4a ubiquitination factor E4A involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000002
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr 8:54,132,799...54,174,921 JBrowse link
G Ube4b ubiquitination factor E4B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:165,049,897...165,153,572 JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:19822669)
GO_REF:0000033
GO_REF:0000024
Ensembl
RGD
GO_Central
UniProt
PMID:19822669 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096 JBrowse link
G Ubqln2 ubiquilin 2 involved_in IBA
ISO
GO_REF:0000033
(PMID:24215460)
GO_Central
RGD
PMID:24215460 GO_REF:0000033 NCBI chr  X:17,853,086...17,856,505 JBrowse link
G Ubxn10 UBX domain protein 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:150,953,772...150,959,608 JBrowse link
G Ubxn4 UBX domain protein 4 involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:19822669)
GO_REF:0000033
GO_REF:0000024
Ensembl
RGD
GO_Central
UniProt
PMID:19822669 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:42,292,346...42,324,928 JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO (PMID:19275885) RGD PMID:19275885 NCBI chr 9:900,883...906,047 JBrowse link
G Ubxn8 UBX domain protein 8 involved_in ISO (PMID:21949850) RGD PMID:21949850 NCBI chr16:58,536,086...58,557,684 JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO
IBA
IDA
(PMID:24089527)
(PMID:12847084)
GO_REF:0000033
RGD
GO_Central
PMID:12847084 PMID:24089527 PMID:12847084 GO_REF:0000033, RGD:10047330 NCBI chr11:82,161,618...82,185,107 JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO (PMID:28437467) RGD PMID:28437467 NCBI chr 1:183,247,676...183,261,665 JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISS
IBA
ISO
IEA
GO_REF:0000024
GO_REF:0000033
(PMID:19465887)
GO_REF:0000107
UniProt
GO_Central
RGD
Ensembl
PMID:19465887 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:109,190,727...109,201,761 JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO
IDA
GO_REF:0000024
(PMID:12847084)
(PMID:17872946), (PMID:20104022), (PMID:22607976), (PMID:24089527), (PMID:24129571), (PMID:25088257), (PMID:26265139)
UniProt
RGD
PMID:12847084 PMID:17872946 PMID:20104022 PMID:22607976 PMID:24089527 More... GO_REF:0000024, RGD:10047330 NCBI chr 5:62,005,984...62,025,387 JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:20160352) RGD PMID:20160352 NCBI chr14:73,810,478...73,834,993 JBrowse link
G Yod1 YOD1 deubiquitinase involved_in IBA
ISO
ISS
GO_REF:0000033
(PMID:19818707)
GO_REF:0000024
GO_Central
RGD
UniProt
PMID:19818707 GO_REF:0000024 GO_REF:0000033 NCBI chr13:42,175,047...42,181,661 JBrowse link
G protein-coupled receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn2 beclin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23954414)
MGI:5550535 (PMID:23954414)
UniProtKB:Q5JY77 (PMID:23954414)
RGD PMID:23954414 NCBI chr13:90,375,186...90,424,533 JBrowse link
G Gprasp1 G protein-coupled receptor associated sorting protein 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
UniProtKB:A8MW95 (PMID:23954414)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23954414 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:98,764,853...98,772,685 JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of ISO MGI:2148638 (PMID:14581480) RGD PMID:14581480 NCBI chr10:28,255,025...28,373,418 JBrowse link
G Adrb1 adrenoceptor beta 1 IDA RGD PMID:17911346 RGD:5129142 NCBI chr 1:265,777,103...265,780,114 JBrowse link
G Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase involved_in IMP
ISO
IBA
IDA
MGI:4432988|MGI:5661387 (PMID:24613482), (PMID:25092169)
GO_REF:0000033
RGD
GO_Central
PMID:24613482 PMID:25092169 PMID:9281456 PMID:6449198 PMID:11766064 More... GO_REF:0000033, RGD:1598779, RGD:1642743, RGD:2304191, RGD:1642741 NCBI chr 2:204,705,053...204,760,966 JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2387343 (PMID:10625614) RGD PMID:10625614 NCBI chr10:86,307,400...86,318,766 JBrowse link
G Gaa alpha glucosidase involved_in
acts_upstream_of_or_within
IMP
IBA
ISO
IDA
GO_REF:0000033
MGI:2148550|MGI:2179955|MGI:2179960|MGI:2179961 (PMID:10838256), (PMID:11328962), (PMID:11785984)
(PMID:29061980), (PMID:9505277)
GO_Central
RGD
PMID:9505277 PMID:10838256 PMID:11328962 PMID:11785984 PMID:29061980 More... GO_REF:0000033, RGD:1599504, RGD:1599506 NCBI chr10:104,529,673...104,546,836 JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of ISO MGI:3530901 (PMID:10391216) RGD PMID:10391216 NCBI chr12:11,009,236...11,015,941 JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4356541 (PMID:19696889)
Ensembl
RGD
PMID:19696889 GO_REF:0000107 NCBI chr 7:131,100,684...131,138,250 JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in ISO (PMID:927504) RGD PMID:927504 NCBI chr14:44,166,314...44,199,828 JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO MGI:5629316 (PMID:34083142) RGD PMID:34083142 NCBI chr 1:191,614,738...191,627,615 JBrowse link
G Pygb glycogen phosphorylase B involved_in IDA
ISO
IBA
IEA
(PMID:32446205)
GO_REF:0000033
GO_REF:0000117
RGD
GO_Central
UniProt
PMID:32446205 PMID:16226229 PMID:11071367 PMID:10634496 GO_REF:0000033 GO_REF:0000117, RGD:1642804, RGD:2304126, RGD:1642809 NCBI chr 3:139,611,724...139,658,521 JBrowse link
G Pygl glycogen phosphorylase L involved_in IDA
ISO
IBA
MGI:4362669 (PMID:31701076), (PMID:36077341)
GO_REF:0000033
RGD
GO_Central
PMID:31701076 PMID:36077341 PMID:15152027 PMID:6449198 PMID:114169 GO_REF:0000033, RGD:1642805, RGD:1642743, RGD:2304128 NCBI chr 6:94,433,558...94,476,219 JBrowse link
G Pygm glycogen phosphorylase, muscle associated acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
(PMID:15282316), (PMID:17689562)
MGI:5696972 (PMID:31511858)
GO_REF:0000033
GO_REF:0000117
(PMID:1150650), (PMID:8316268)
RGD
GO_Central
UniProt
PMID:1150650 PMID:8316268 PMID:15282316 PMID:17689562 PMID:31511858 More... GO_REF:0000033 GO_REF:0000117, RGD:1599986, RGD:1642743, RGD:1599897, RGD:2304126, RGD:1642811 NCBI chr 1:203,690,550...203,705,369 JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4356541 (PMID:19696889)
Ensembl
RGD
PMID:19696889 GO_REF:0000107 NCBI chr 7:131,100,684...131,138,250 JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:41,638,841...41,649,311 JBrowse link
G Atg2a autophagy related 2A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,542,559...203,562,242 JBrowse link
G Atg2b autophagy related 2B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:124,522,283...124,592,412 JBrowse link
G Atg3 autophagy related 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:55,624,914...55,653,249 JBrowse link
G Gaa alpha glucosidase involved_in IEA
ISO
GO_REF:0000107
MGI:2148550 (PMID:12739885)
Ensembl
RGD
PMID:12739885 GO_REF:0000107 NCBI chr10:104,529,673...104,546,836 JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in ISO (PMID:20810658) RGD PMID:20810658 NCBI chr 4:164,666,332...164,675,474 JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:13,161,648...13,225,560 JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857 JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:17,448,195...17,454,117 JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,097,655...107,127,839 JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:95,042,451...95,079,679 JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:17,024,876...17,053,306 JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (PMID:16431915) RGD PMID:16431915 NCBI chr13:63,858,282...63,920,538 JBrowse link
G Fbxo17 F-box protein 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:84,002,276...84,024,455 JBrowse link
G Fbxo2 F-box protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:12140560)
(PMID:15723043)
GO_Central
RGD
PMID:12140560 PMID:15723043 GO_REF:0000033 NCBI chr 5:163,876,079...163,881,508 JBrowse link
G Fbxo27 F-box protein 27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,965,426...83,987,781 JBrowse link
G Fbxo44 F-box protein 44 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:163,866,517...163,875,928 JBrowse link
G Fbxo6 F-box protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:15723043)
GO_Central
RGD
PMID:15723043 GO_REF:0000033 NCBI chr 5:163,859,909...163,865,693 JBrowse link
G Glb1 galactosidase, beta 1 involved_in ISO (PMID:31720227) RGD PMID:31720227 NCBI chr 8:122,963,718...123,036,326 JBrowse link
G Manba mannosidase beta involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
(PMID:16377659)
(PMID:3447593)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:3447593 PMID:16377659 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:223,910,432...224,002,988 JBrowse link
G Nccrp1 NCCRP1, F-box associated domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,835,083...83,838,620 JBrowse link
G Neu2 neuraminidase 2 involved_in ISO
IEA
(PMID:14613940)
GO_REF:0000107
RGD
Ensembl
PMID:14613940 GO_REF:0000107 NCBI chr 9:95,666,338...95,715,209 JBrowse link
G Neu4 neuraminidase 4 involved_in ISO (PMID:15213228), (PMID:15847605)
(PMID:19506080), (PMID:22393058)
RGD PMID:15213228 PMID:15847605 PMID:19506080 PMID:22393058 NCBI chr 9:101,844,261...101,849,917 JBrowse link
G Ngly1 N-glycanase 1 involved_in ISO
IBA
IEA
ISS
(PMID:15358861)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:15358861 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr15:9,153,738...9,210,228 JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B involved_in ISO (PMID:22607976) RGD PMID:22607976 NCBI chr 8:114,928,678...114,994,027 JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal2 hyaluronidase 2 involved_in ISO
ISS
(PMID:9712871)
GO_REF:0000024
RGD
UniProt
PMID:9712871 GO_REF:0000024 NCBI chr 8:108,241,895...108,246,853 JBrowse link
G Hyal4 hyaluronidase 4 TAS RGD PMID:10989127 RGD:1331360 NCBI chr 4:53,256,179...53,274,819 JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO (PMID:28593992) RGD PMID:28593992 NCBI chr  X:149,025,976...149,046,641 JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within IDA
ISO
MGI:2176236|MGI:2651471|MGI:4415188 (PMID:16979922), (PMID:19751987), (PMID:19834056), (PMID:21873421), (PMID:22580166) RGD PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 PMID:22580166 More... RGD:1599427 NCBI chr14:1,031,588...1,059,494 JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 acts_upstream_of_or_within ISO (PMID:11278811) RGD PMID:11278811 NCBI chr 1:164,962,872...164,976,309 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO
IBA
(PMID:15146460), (PMID:7493035)
GO_REF:0000033
RGD
GO_Central
PMID:7493035 PMID:15146460 GO_REF:0000033 NCBI chr10:104,596,810...104,613,510 JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase involved_in ISO (PMID:15595925) RGD PMID:15595925 NCBI chr 7:56,889,148...56,923,173 JBrowse link
G Gpc1 glypican 1 involved_in ISO
ISS
IEA
(PMID:12732622)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12732622 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:100,843,645...100,871,458 JBrowse link
G Gusb glucuronidase, beta involved_in ISO MGI:1856041 (PMID:11273777), (PMID:23897660) RGD PMID:11273777 PMID:23897660 NCBI chr12:32,337,281...32,350,838 JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase involved_in ISO UniProtKB:Q68CP4 (PMID:16960811) RGD PMID:16960811 NCBI chr16:66,105,233...66,137,444 JBrowse link
G Hpse heparanase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12460766)
(PMID:12213822)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12213822 PMID:12460766 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,200,971...9,241,377 JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO MGI:3625122 (PMID:17876721) RGD PMID:17876721 NCBI chr  X:149,025,976...149,046,641 JBrowse link
G Idua alpha-L-iduronidase involved_in ISO MGI:2176236|MGI:2651471 (PMID:15979918), (PMID:25854773) RGD PMID:15979918 PMID:25854773 NCBI chr14:1,031,588...1,059,494 JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in ISO MGI:1934018 (PMID:10588735) RGD PMID:10588735 NCBI chr10:86,001,545...86,009,049 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in ISO
IBA
(PMID:15146460)
GO_REF:0000033
MGI:1856041|MGI:2151181 (PMID:10561464), (PMID:11273777)
RGD
GO_Central
PMID:10561464 PMID:11273777 PMID:15146460 GO_REF:0000033 NCBI chr10:104,596,810...104,613,510 JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:21873421)
MGI:2176236|MGI:4415188 (PMID:19751987), (PMID:19834056), (PMID:21873421)
RGD PMID:19751987 PMID:19834056 PMID:21873421 NCBI chr14:1,031,588...1,059,494 JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16086026) RGD PMID:16086026 NCBI chr 8:62,724,939...62,829,040 JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr18:36,750,732...36,787,067 JBrowse link
G Eri1 exoribonuclease 1 NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:18172165)
UniProt
RGD
PMID:18172165 GO_REF:0000024 NCBI chr16:56,724,101...56,744,228 JBrowse link
G Exosc10 exosome component 10 involved_in ISO
IBA
(PMID:18172165)
GO_REF:0000033
RGD
GO_Central
PMID:18172165 GO_REF:0000033 NCBI chr 5:164,278,414...164,302,067 JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 7:109,928,491...109,931,233 JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr16:66,277,345...66,288,852 JBrowse link
G Mtpap mitochondrial poly(A) polymerase involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:53,320,739...53,341,500 JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18172165)
UniProt
Ensembl
RGD
PMID:18172165 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,115,150...26,167,465 JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr19:34,984,244...35,042,423 JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:18172165)
UniProt
RGD
PMID:18172165 GO_REF:0000024 NCBI chr 1:205,848,691...205,859,767 JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 5:123,201,723...123,306,582 JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:4,849,287...4,903,542 JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:16086026) RGD PMID:16086026 NCBI chr16:19,076,594...19,097,365 JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 8:96,527,871...96,637,385 JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule involved_in ISO
IEA
(PMID:17170110)
(PMID:26528478)
GO_REF:0000107
RGD
Ensembl
PMID:17170110 PMID:26528478 GO_REF:0000107 NCBI chr 3:109,610,824...109,699,776 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24251095)
(PMID:23509262)
UniProt
RGD
PMID:23509262 PMID:24251095 GO_REF:0000024 NCBI chr 1:137,906,921...138,062,430 JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 involved_in ISO (PMID:34624311) RGD PMID:34624311 NCBI chr 1:228,756,826...228,834,313 JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) RGD PMID:19577615 NCBI chr 2:122,164,454...122,218,796 JBrowse link
G Gusb glucuronidase, beta involved_in ISO (PMID:20385825) RGD PMID:20385825 NCBI chr12:32,337,281...32,350,838 JBrowse link
G Hexa hexosaminidase subunit alpha involved_in ISO MGI:2429698 (PMID:22451654) RGD PMID:22451654 NCBI chr 8:59,936,526...59,961,654 JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA
ISO
GO_REF:0000107
MGI:2429701 (PMID:22451654)
Ensembl
RGD
PMID:22451654 GO_REF:0000107 NCBI chr 2:28,483,997...28,504,165 JBrowse link
G Hmmr hyaluronan-mediated motility receptor involved_in ISO (PMID:26528478) RGD PMID:26528478 NCBI chr10:25,635,249...25,665,389 JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO
IBA
IEA
(PMID:12084718)
(PMID:11296287), (PMID:17170110), (PMID:20473947), (PMID:21695196), (PMID:21699545)
MGI:2658730 (PMID:22451654), (PMID:26887442)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:11296287 PMID:12084718 PMID:17170110 PMID:20473947 PMID:21695196 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 8:108,250,668...108,254,519 JBrowse link
G Hyal2 hyaluronidase 2 involved_in IDA
ISO
IBA
IEA
PMID:19635555
MGI:3836764 (PMID:23172227), (PMID:26887442)
GO_REF:0000033
GO_REF:0000107
(PMID:17170110), (PMID:19443707), (PMID:20554532), (PMID:21699545)
RGD
GO_Central
Ensembl
PMID:17170110 PMID:19443707 PMID:20554532 PMID:21699545 PMID:23172227 More... GO_REF:0000033 GO_REF:0000107, RGD:8553259 NCBI chr 8:108,241,895...108,246,853 JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:20586096)
GO_REF:0000033
(PMID:21699545)
(PMID:12084718)
UniProt
Ensembl
RGD
GO_Central
PMID:12084718 PMID:20586096 PMID:21699545 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:108,254,385...108,260,020 JBrowse link
G Hyal4 hyaluronidase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:53,256,179...53,274,819 JBrowse link
G Hyal5 hyaluronoglucosaminidase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:53,341,105...53,412,280 JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in ISO (PMID:11278811) RGD PMID:11278811 NCBI chr 1:164,962,872...164,976,309 JBrowse link
G Spam1 sperm adhesion molecule 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:53,302,745...53,312,913 JBrowse link
G Stab2 stabilin 2 involved_in IEA
ISO
GO_REF:0000107
MGI:5318244 (PMID:22371575)
Ensembl
RGD
PMID:22371575 GO_REF:0000107 NCBI chr 7:23,136,938...23,342,633 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:17324121)
GO_REF:0000024
RGD
UniProt
PMID:17324121 GO_REF:0000024 NCBI chr 1:90,324,312...90,340,627 JBrowse link
insulin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP
ISO
ISS
PMID:11850617
(PMID:18544705)
GO_REF:0000024
RGD
UniProt
PMID:18544705 PMID:11850617 GO_REF:0000024, RGD:734645 NCBI chr 1:90,171,401...90,187,810 JBrowse link
G Cela2a chymotrypsin like elastase 2A involved_in ISO
ISS
(PMID:31358993)
GO_REF:0000024
RGD
UniProt
PMID:31358993 GO_REF:0000024 NCBI chr 5:154,126,879...154,136,630 JBrowse link
G Ctsd cathepsin D involved_in ISO
IEA
(PMID:27703010)
GO_REF:0000107
RGD
Ensembl
PMID:27703010 GO_REF:0000107 NCBI chr 1:206,956,945...206,968,821 JBrowse link
G Ide insulin degrading enzyme involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:24847884), (PMID:27703010)
GO_REF:0000107
(PMID:19321446), (PMID:9231799), (PMID:9830016)
UniProt
RGD
Ensembl
PMID:9231799 PMID:9830016 PMID:19321446 PMID:24847884 PMID:27703010 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:244,415,495...244,516,925 JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glb1 galactosidase, beta 1 involved_in ISO (PMID:31720227) RGD PMID:31720227 NCBI chr 8:122,963,718...123,036,326 JBrowse link
G Gns glucosamine (N-acetyl)-6-sulfatase IDA RGD PMID:3161730 RGD:1600571 NCBI chr 7:56,889,148...56,923,173 JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase involved_in ISO
IBA
(PMID:1883828), (PMID:29343645)
GO_REF:0000033
RGD
GO_Central
PMID:1883828 PMID:29343645 GO_REF:0000033 NCBI chr17:48,503,812...48,745,161 JBrowse link
lipoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107202 (PMID:15863839)
Ensembl
RGD
PMID:15863839 GO_REF:0000107 NCBI chr 6:36,563,704...36,603,300 JBrowse link
G Apoc2 apolipoprotein C2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:79,329,429...79,334,397 JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO MGI:1857303 (PMID:17720994) RGD PMID:17720994 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:88057 (PMID:15863839) RGD PMID:15863839 NCBI chr 8:62,724,939...62,829,040 JBrowse link
G Ctsd cathepsin D involved_in ISO
IEA
(PMID:16997486)
GO_REF:0000107
RGD
Ensembl
PMID:16997486 GO_REF:0000107 NCBI chr 1:206,956,945...206,968,821 JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857212 (PMID:15741654), (PMID:15805190), (PMID:9788969)
Ensembl
RGD
PMID:9788969 PMID:15741654 PMID:15805190 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981 JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:6364606 (PMID:33357458)
Ensembl
RGD
PMID:33357458 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936 JBrowse link
lncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr82 WD repeat domain 82 involved_in ISO (PMID:33913806)
(PMID:33767452)
RGD PMID:33767452 PMID:33913806 NCBI chr 8:106,814,569...106,834,535 JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 involved_in ISO (PMID:33913806)
(PMID:33767452)
RGD PMID:33767452 PMID:33913806 NCBI chr 1:77,106,309...77,143,827 JBrowse link
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO
ISS
(PMID:16912035), (PMID:18197702)
PMID:12552133
GO_REF:0000024
RGD
UniProt
PMID:16912035 PMID:18197702 PMID:12552133 GO_REF:0000024, RGD:629554 NCBI chr 5:126,440,102...126,462,507 JBrowse link
lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 acts_upstream_of_or_within ISO MGI:4460281 (PMID:30930081) RGD PMID:30930081 NCBI chr12:12,093,834...12,109,043 JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:36,650,384...36,654,348 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:10527801), (PMID:17855597) RGD PMID:10527801 PMID:17855597 NCBI chr 1:181,156,071...181,169,458 JBrowse link
G Cst7 cystatin F involved_in ISO (PMID:15752368), (PMID:22365146) RGD PMID:15752368 PMID:22365146 NCBI chr 3:139,396,830...139,405,557 JBrowse link
G Ctsh cathepsin H involved_in ISO (PMID:15752368) RGD PMID:15752368 NCBI chr 8:99,488,756...99,507,639 JBrowse link
G Dpp7 dipeptidylpeptidase 7 acts_upstream_of_or_within ISO (PMID:28728022) RGD PMID:28728022 NCBI chr 3:28,563,240...28,567,492 JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO MGI:3762618 (PMID:28728022) RGD PMID:28728022 NCBI chr10:87,387,672...87,393,777 JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in ISO
IEA
ISS
(PMID:24880125)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24880125 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:122,038,734...122,087,745 JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) RGD PMID:27654426 NCBI chr 2:123,822,042...123,847,808 JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of ISO MGI:1857830 (PMID:25592972), (PMID:26467158) RGD PMID:25592972 PMID:26467158 NCBI chr 7:111,708,353...111,761,825 JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:12813057) RGD PMID:12813057 NCBI chr20:28,756,951...28,783,422 JBrowse link
G Slc17a9 solute carrier family 17 member 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:24962569)
Ensembl
RGD
PMID:24962569 GO_REF:0000107 NCBI chr 3:188,211,106...188,233,553 JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within ISO MGI:5319917 (PMID:28728022) RGD PMID:28728022 NCBI chr 4:41,328,125...41,347,315 JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28296633)
UniProt
Ensembl
RGD
PMID:28296633 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,402,493...63,407,065 JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28728022)
Ensembl
RGD
PMID:28728022 GO_REF:0000107 NCBI chr 1:160,097,984...160,104,108 JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A involved_in ISO (PMID:30709847) RGD PMID:30709847 NCBI chr 1:223,328,784...223,555,500 JBrowse link
mannoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 4:141,797,631...141,829,717 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 3:144,201,604...144,227,423 JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO
IBA
(PMID:25092655)
GO_REF:0000033
(PMID:16431915)
RGD
GO_Central
PMID:16431915 PMID:25092655 GO_REF:0000033 NCBI chr13:63,858,282...63,920,538 JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO (PMID:10521544), (PMID:18003979) RGD PMID:10521544 PMID:18003979 NCBI chr 3:28,539,778...28,563,155 JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Man1a1 mannosidase, alpha, class 1A, member 1 involved_in ISO (PMID:27108681) RGD PMID:27108681 NCBI chr20:33,202,509...33,385,747 JBrowse link
maternal mRNA clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lsm14b LSM family member 14B involved_in ISO (PMID:37889087) RGD PMID:37889087 NCBI chr 3:167,125,633...167,136,417 JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 3:141,145,792...141,183,557 JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (PMID:22795130) RGD PMID:22795130 NCBI chr 9:83,630,037...83,748,690 JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 involved_in ISO
IBA
(PMID:24141620)
(PMID:23594738), (PMID:25119025)
GO_REF:0000033
RGD
GO_Central
PMID:23594738 PMID:24141620 PMID:25119025 GO_REF:0000033 NCBI chr 9:94,802,056...95,184,523 JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:19703396)
(PMID:18292307), (PMID:18604195), (PMID:21962509)
RGD PMID:18292307 PMID:18604195 PMID:19703396 PMID:21962509 NCBI chr 5:146,227,119...146,244,122 JBrowse link
G Lin28b lin-28 homolog B involved_in ISO (PMID:19703396) RGD PMID:19703396 NCBI chr20:48,865,329...48,964,769 JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:25049417) RGD PMID:25049417 NCBI chr10:1,410,636...1,548,573 JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in ISO
IEA
(PMID:28546213)
GO_REF:0000107
RGD
Ensembl
PMID:28546213 GO_REF:0000107 NCBI chr 4:57,095,205...57,494,501 JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:25049417) RGD PMID:25049417 NCBI chr19:34,984,244...35,042,423 JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) RGD PMID:19703396 NCBI chr 5:123,201,723...123,306,582 JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
GO_REF:0000024
(PMID:22055188)
UniProt
RGD
PMID:22055188 GO_REF:0000024 NCBI chr 5:142,661,193...142,670,051 JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,722,111...138,757,118 JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
ISS
IEA
(PMID:15260970), (PMID:17524464), (PMID:18771919)
(PMID:16357216)
GO_REF:0000024
GO_REF:0000104
RGD
UniProt
PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 GO_REF:0000024 GO_REF:0000104 NCBI chr 7:106,907,209...106,994,124 JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,632,367...138,714,230 JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,780,446...138,825,898 JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO
IEA
ISS
(PMID:20065043)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20065043 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,978,785...34,031,025 JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:20065043) RGD PMID:20065043 NCBI chr16:51,775,416...51,794,581 JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in ISO (PMID:20065043) RGD PMID:20065043 NCBI chr10:42,281,614...42,294,740 JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:23499676), (PMID:25802280) RGD PMID:23499676 PMID:25802280 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir100 microRNA 100 involved_in ISO (PMID:22684006) RGD PMID:22684006 NCBI chr 8:41,901,225...41,901,304 JBrowse link
G Mir106a microRNA 106a involved_in ISO (PMID:22912877), (PMID:26265888), (PMID:27325313) RGD PMID:22912877 PMID:26265888 PMID:27325313 NCBI chr  X:132,422,584...132,422,661 JBrowse link
G Mir106b microRNA 106b involved_in ISO (PMID:27325313) RGD PMID:27325313 NCBI chr12:17,043,344...17,043,425 JBrowse link
G Mir125a microRNA 125a involved_in ISO (PMID:30670152) RGD PMID:30670152 NCBI chr 1:58,677,626...58,677,710 JBrowse link
G Mir125b1 microRNA 125b-1 involved_in ISO (PMID:28214897) RGD PMID:28214897 NCBI chr 8:50,850,036...50,850,122 JBrowse link
G Mir125b2 microRNA 125b-2 involved_in ISO (PMID:28214897) RGD PMID:28214897 NCBI chr11:29,732,572...29,732,659 JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:33058756) RGD PMID:33058756 NCBI chr13:39,699,449...39,699,530 JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:33058756) RGD PMID:33058756 NCBI chr 8:112,085,467...112,085,550 JBrowse link
G Mir130a microRNA 130a involved_in ISO (PMID:30741461) RGD PMID:30741461 NCBI chr 3:69,822,542...69,822,629 JBrowse link
G Mir130b microRNA 130b involved_in ISO (PMID:24040078) RGD PMID:24040078 NCBI chr11:83,880,163...83,880,244 JBrowse link
G Mir133a1 microRNA 133a-1 involved_in ISO (PMID:32205184) RGD PMID:32205184 NCBI chr18:1,885,082...1,885,168 JBrowse link
G Mir135b microRNA 135b involved_in ISO (PMID:27793001) RGD PMID:27793001 NCBI chr13:43,638,857...43,638,953 JBrowse link
G Mir137 microRNA 137 involved_in ISO (PMID:23275153) RGD PMID:23275153 NCBI chr 2:206,480,881...206,480,982 JBrowse link
G Mir140 microRNA 140 involved_in ISO (PMID:24928442) RGD PMID:24928442 NCBI chr19:52,375,293...52,375,391 JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:24558198), (PMID:26572508), (PMID:31168355) RGD PMID:24558198 PMID:26572508 PMID:31168355 NCBI chr10:72,557,864...72,557,950 JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:25323858), (PMID:25704091), (PMID:29883722) RGD PMID:25323858 PMID:25704091 PMID:29883722 NCBI chr18:57,369,983...57,370,070 JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:30779466) RGD PMID:30779466 NCBI chr10:28,349,996...28,350,090 JBrowse link
G Mir151 microRNA 151 involved_in ISO (PMID:20305651) RGD PMID:20305651 NCBI chr 7:105,172,377...105,172,473 JBrowse link
G Mir181a2 microRNA 181a-2 involved_in ISO (PMID:22714950), (PMID:25535255) RGD PMID:22714950 PMID:25535255 NCBI chr 3:22,615,845...22,615,961 JBrowse link
G Mir181b1 microRNA 181b-1 involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr13:52,037,228...52,037,337 JBrowse link
G Mir181b2 microRNA 181b-2 involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr 3:22,616,948...22,617,035 JBrowse link
G Mir181c microRNA 181c involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr19:23,983,523...23,983,628 JBrowse link
G Mir181d microRNA 181d involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr19:23,983,706...23,983,788 JBrowse link
G Mir185 microRNA 185 involved_in ISO (PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) RGD PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 NCBI chr11:82,664,716...82,664,795 JBrowse link
G Mir18a microRNA 18a involved_in ISO (PMID:28131417), (PMID:29988076), (PMID:34937502) RGD PMID:28131417 PMID:29988076 PMID:34937502 NCBI chr15:92,180,765...92,180,860 JBrowse link
G Mir190b microRNA 190b involved_in ISO (PMID:32039833) RGD PMID:32039833 NCBI chr 2:175,514,800...175,514,877 JBrowse link
G Mir191 microRNA 191 involved_in ISO (PMID:31874245) RGD PMID:31874245 NCBI chr 8:109,264,098...109,264,188 JBrowse link
G Mir192 microRNA 192 involved_in ISO (PMID:28483554) RGD PMID:28483554 NCBI chr 1:212,994,209...212,994,318 JBrowse link
G Mir193a microRNA 193a involved_in ISO (PMID:29725386) RGD PMID:29725386 NCBI chr10:64,672,343...64,672,454 JBrowse link
G Mir195 microRNA 195 involved_in ISO (PMID:31921616) RGD PMID:31921616 NCBI chr10:54,951,838...54,951,924 JBrowse link
G Mir196a1 microRNA 196a-1 acts_upstream_of_or_within ISO (PMID:15105502), (PMID:15361871) RGD PMID:15105502 PMID:15361871 NCBI chr10:81,231,006...81,231,085 JBrowse link
G Mir196a2 microRNA 196a-2 acts_upstream_of_or_within ISO (PMID:15105502), (PMID:15361871) RGD PMID:15105502 PMID:15361871 NCBI chr 7:134,110,400...134,110,509 JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within ISO (PMID:15105502) RGD PMID:15105502 NCBI chr 4:81,330,487...81,330,571 JBrowse link
G Mir19a microRNA 19a involved_in ISO (PMID:27098600), (PMID:29130787) RGD PMID:27098600 PMID:29130787 NCBI chr15:92,180,912...92,180,993 JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:27098600) RGD PMID:27098600 NCBI chr15:92,181,214...92,181,300 JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:27098600) RGD PMID:27098600 NCBI chr  X:132,422,072...132,422,167 JBrowse link
G Mir1a-1 microRNA 1a-1 involved_in ISO (PMID:23499676), (PMID:25802280) RGD PMID:23499676 PMID:25802280 NCBI chr 3:167,487,117...167,487,201 JBrowse link
G Mir200b microRNA 200b involved_in ISO (PMID:22522429) RGD PMID:22522429 NCBI chr 5:171,931,495...171,931,589 JBrowse link
G Mir200c microRNA 200c involved_in ISO (PMID:22522429) RGD PMID:22522429 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir204 microRNA 204 involved_in ISO (PMID:20056717) RGD PMID:20056717 NCBI chr 1:220,316,931...220,317,040 JBrowse link
G Mir206 microRNA 206 involved_in ISO (PMID:23499676) RGD PMID:23499676 NCBI chr 9:23,094,249...23,094,332 JBrowse link
G Mir20a microRNA 20a involved_in ISO (PMID:29653364), (PMID:31368162) RGD PMID:29653364 PMID:31368162 NCBI chr15:92,181,084...92,181,168 JBrowse link
G Mir20b microRNA 20b involved_in ISO (PMID:32336590) RGD PMID:32336590 NCBI chr  X:132,422,211...132,422,282 JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:29944867) RGD PMID:29944867 NCBI chr 1:196,326,343...196,326,452 JBrowse link
G Mir211 microRNA 211 involved_in ISO (PMID:21109473) RGD PMID:21109473 NCBI chr 1:117,777,539...117,777,644 JBrowse link
G Mir212 microRNA 212 involved_in ISO (PMID:26693054) RGD PMID:26693054 NCBI chr10:60,023,403...60,023,513 JBrowse link
G Mir214 microRNA 214 involved_in ISO (PMID:30703347) RGD PMID:30703347 NCBI chr13:74,588,374...74,588,481 JBrowse link
G Mir223 microRNA 223 involved_in ISO (PMID:23459944), (PMID:30807577), (PMID:34637033) RGD PMID:23459944 PMID:30807577 PMID:34637033 NCBI chr  X:61,141,887...61,141,996 JBrowse link
G Mir23a microRNA 23a involved_in ISO (PMID:26400397) RGD PMID:26400397 NCBI chr19:23,954,997...23,955,071 JBrowse link
G Mir24-2 microRNA 24-2 involved_in ISO (PMID:30378100) RGD PMID:30378100 NCBI chr19:23,954,683...23,954,790 JBrowse link
G Mir26b microRNA 26b involved_in ISO (PMID:25536365) RGD PMID:25536365 NCBI chr 9:75,976,596...75,976,680 JBrowse link
G Mir27a microRNA 27a involved_in ISO (PMID:25915942), (PMID:26400397) RGD PMID:25915942 PMID:26400397 NCBI chr19:23,954,831...23,954,917 JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:30729664) RGD PMID:30729664 NCBI chr17:1,813,427...1,813,523 JBrowse link
G Mir29b1 microRNA 29b-1 involved_in ISO (PMID:26175849) RGD PMID:26175849 NCBI chr 4:60,618,334...60,618,414 JBrowse link
G Mir29b2 microRNA 29b-2 involved_in ISO (PMID:26175849) RGD PMID:26175849 NCBI chr13:106,570,371...106,570,451 JBrowse link
G Mir30b microRNA 30b involved_in ISO (PMID:23968872) RGD PMID:23968872 NCBI chr 7:102,021,543...102,021,629 JBrowse link
G Mir320a microRNA 320a involved_in ISO (PMID:32271402) RGD PMID:32271402 NCBI chr15:45,516,392...45,516,473 JBrowse link
G Mir322 microRNA 322 involved_in ISO (PMID:29130787) RGD PMID:29130787 NCBI chr  X:132,806,594...132,806,688 JBrowse link
G Mir326 microRNA 326 involved_in ISO (PMID:24279830) RGD PMID:24279830 NCBI chr 1:153,854,029...153,854,123 JBrowse link
G Mir337 microRNA 337 involved_in ISO (PMID:22723956) RGD PMID:22723956 NCBI chr 6:128,538,903...128,538,999 JBrowse link
G Mir340 microRNA 340 involved_in ISO (PMID:28413603) RGD PMID:28413603 NCBI chr10:34,393,568...34,393,665 JBrowse link
G Mir342 microRNA 342 involved_in ISO (PMID:23951060) RGD PMID:23951060 NCBI chr 6:127,565,269...127,565,367 JBrowse link
G Mir34b microRNA 34b involved_in ISO (PMID:22336710) RGD PMID:22336710 NCBI chr 8:60,306,609...60,306,692 JBrowse link
G Mir3582 microRNA 3582 involved_in ISO (PMID:32205184) RGD PMID:32205184 NCBI chr18:2,157,853...2,157,970 JBrowse link
G Mir365b microRNA 365b involved_in ISO (PMID:30910589) RGD PMID:30910589 NCBI chr10:64,686,255...64,686,340 JBrowse link
G Mir423 microRNA 423 involved_in ISO (PMID:32264887) RGD PMID:32264887 NCBI chr10:61,914,142...61,914,220 JBrowse link
G Mir486 microRNA 486 involved_in ISO (PMID:25857263) RGD PMID:25857263
G Mir497 microRNA 497 involved_in ISO (PMID:29969696) RGD PMID:29969696 NCBI chr10:55,450,171...55,450,239 JBrowse link
G Mir544 microRNA 544 involved_in ISO (PMID:27186677) RGD PMID:27186677 NCBI chr 6:128,743,530...128,743,607 JBrowse link
G Mir665 microRNA 665 involved_in ISO (PMID:34454184) RGD PMID:34454184 NCBI chr 6:128,539,440...128,539,533 JBrowse link
G Mir708 microRNA 708 involved_in ISO (PMID:26932538) RGD PMID:26932538 NCBI chr 1:150,599,876...150,599,963 JBrowse link
G Mir9-3 microRNA 9-3 involved_in ISO (PMID:26315535), (PMID:29584810) RGD PMID:26315535 PMID:29584810 NCBI chr 1:142,849,400...142,849,489 JBrowse link
G Mir93 microRNA 93 involved_in ISO (PMID:24606633), (PMID:28797104) RGD PMID:24606633 PMID:28797104 NCBI chr12:17,043,135...17,043,221 JBrowse link
G Mir96 microRNA 96 involved_in ISO (PMID:23459944) RGD PMID:23459944 NCBI chr 4:58,788,411...58,788,516 JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:27860183), (PMID:28251559), (PMID:30195495) RGD PMID:27860183 PMID:28251559 PMID:30195495 NCBI chr  X:20,981,235...20,981,342 JBrowse link
G Mirlet7a1 microRNA let-7a-1 involved_in ISO (PMID:17671087), (PMID:30467960) RGD PMID:17671087 PMID:30467960 NCBI chr17:16,320,133...16,320,226 JBrowse link
G Mirlet7b microRNA let-7b involved_in ISO (PMID:29471394) RGD PMID:29471394 NCBI chr 7:116,804,186...116,804,270 JBrowse link
G Mirlet7c1 microRNA let-7c-1 involved_in ISO (PMID:19841744) RGD PMID:19841744 NCBI chr11:16,201,163...16,201,256 JBrowse link
G Mirlet7c2 microRNA let7c-2 involved_in ISO (PMID:17671087), (PMID:30467960) RGD PMID:17671087 PMID:30467960 NCBI chr 7:116,803,771...116,803,865 JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:16289642) RGD PMID:16289642 NCBI chr 2:192,292,041...192,315,142 JBrowse link
mitochondrial DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Endog endonuclease G involved_in ISO (PMID:29719607) RGD PMID:29719607 NCBI chr 3:13,449,113...13,451,715 JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde12 phosphodiesterase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:21245038), (PMID:21666256)
Ensembl
RGD
PMID:21245038 PMID:21666256 GO_REF:0000107 NCBI chr16:1,920,062...1,925,638 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO
IBA
(PMID:20691904)
GO_REF:0000033
RGD
GO_Central
PMID:20691904 GO_REF:0000033 NCBI chr14:102,877,553...102,908,696 JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in ISO
ISS
(PMID:19864255)
GO_REF:0000024
RGD
UniProt
PMID:19864255 GO_REF:0000024 NCBI chr20:30,378,542...30,399,076 JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 Suv3 like RNA helicase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19864255)
UniProt
Ensembl
RGD
PMID:19864255 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076 JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 Suv3 like RNA helicase involved_in ISO
IEA
ISS
(PMID:19864255)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19864255 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076 JBrowse link
mitochondrial protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in ISO
IEA
(PMID:26759378)
GO_REF:0000107
RGD
Ensembl
PMID:26759378 GO_REF:0000107 NCBI chr20:45,798,344...45,967,997 JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:22292033) RGD PMID:22292033 NCBI chr 1:203,137,778...203,154,962 JBrowse link
G Bnip3l BCL2 interacting protein 3 like involved_in ISO (PMID:21264228) RGD PMID:21264228 NCBI chr15:45,350,081...45,373,213 JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO
IEA
ISS
(PMID:30858161)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:30858161 GO_REF:0000024 GO_REF:0000107 NCBI chr14:77,941,927...77,991,021 JBrowse link
G Proca1 protein interacting with cyclin A1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:63,090,018...63,102,941 JBrowse link
G Spata18 spermatogenesis associated 18 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:21264221), (PMID:21264228)
GO_REF:0000107
UniProt
GO_Central
InterPro
RGD
Ensembl
PMID:21264221 PMID:21264228 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:34,531,931...34,558,671 JBrowse link
G Yme1l1 YME1-like 1 ATPase involved_in ISO (PMID:27495975), (PMID:27786171) RGD PMID:27495975 PMID:27786171 NCBI chr17:90,195,485...90,235,675 JBrowse link
mitochondrial protein quality control term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in IEA
ISO
GO_REF:0000107
(PMID:27323408)
Ensembl
RGD
PMID:27323408 GO_REF:0000107 NCBI chr20:45,798,344...45,967,997 JBrowse link
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 involved_in ISO (PMID:26504172), (PMID:30683687), (PMID:34718584) RGD PMID:26504172 PMID:30683687 PMID:34718584 NCBI chr18:63,224,163...63,269,000 JBrowse link
G Oxa1l OXA1L, mitochondrial inner membrane protein involved_in ISO (PMID:38199007) RGD PMID:38199007 NCBI chr15:27,813,688...27,821,319 JBrowse link
G Proca1 protein interacting with cyclin A1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:63,090,018...63,102,941 JBrowse link
G Tmem126a transmembrane protein 126A involved_in ISO
IEA
ISS
(PMID:38199007)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:38199007 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:144,424,481...144,430,730 JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in ISO
IEA
(PMID:39019044)
GO_REF:0000107
RGD
Ensembl
PMID:39019044 GO_REF:0000107 NCBI chr10:56,198,534...56,203,185 JBrowse link
G Lrpprc leucine-rich pentatricopeptide repeat containing involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:3857306|MGI:5438913 (PMID:21880015), (PMID:22045337)
Ensembl
RGD
PMID:21880015 PMID:22045337 GO_REF:0000107 NCBI chr 6:9,859,816...9,942,294 JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 involved_in ISO (PMID:39019044) RGD PMID:39019044 NCBI chr 5:134,749,024...134,773,630 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:18501193), (PMID:39019044) RGD PMID:18501193 PMID:39019044 NCBI chr14:102,877,553...102,908,696 JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 Suv3 like RNA helicase involved_in ISO
ISS
(PMID:19864255)
GO_REF:0000024
RGD
UniProt
PMID:19864255 GO_REF:0000024 NCBI chr20:30,378,542...30,399,076 JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,350,226...203,351,741 JBrowse link
G Isg15 ISG15 ubiquitin-like modifier acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:15485925)
GO_REF:0000033
RGD
GO_Central
PMID:15485925 GO_REF:0000033 NCBI chr 5:172,066,369...172,067,656 JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:33,123,505...33,135,522 JBrowse link
G Rps27a ribosomal protein S27a involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:107,486,664...107,488,941 JBrowse link
G Rps27a-ps12 ribosomal protein S27a, pseudogene 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:24,242,836...24,243,530 JBrowse link
G Rps27a-ps28 ribosomal protein S27a, pseudogene 28 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:234,661,778...234,662,393 JBrowse link
G Rps27a-ps5 ribosomal protein S27a, pseudogene 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:34,393,983...34,394,450 JBrowse link
G Rps27a-ps6 ribosomal protein S27a, pseudogene 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:30,916,279...30,916,833 JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,952,583...18,954,780 JBrowse link
G Uba7 ubiquitin-like modifier activating enzyme 7 acts_upstream_of_or_within ISO (PMID:15485925) RGD PMID:15485925 NCBI chr 8:108,665,289...108,674,097 JBrowse link
G Ubb ubiquitin B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:47,746,923...47,748,628 JBrowse link
G Ubbl1 ubiquitin B like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:34,312,949...34,313,236 JBrowse link
G Ubc ubiquitin C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:36,899,673...36,905,275 JBrowse link
G Ubcl1 ubiquitin C like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:11,802,998...11,803,461 JBrowse link
G Ube2l6 ubiquitin-conjugating enzyme E2L 6 acts_upstream_of_or_within ISO (PMID:15485925) RGD PMID:15485925 NCBI chr 3:90,279,705...90,294,721 JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC118772.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,632,367...138,714,230 JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,780,446...138,825,898 JBrowse link
G Cnot10 CCR4-NOT transcription complex, subunit 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:114,280,486...114,330,110 JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:76,084,269...76,109,111 JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:21070968) RGD PMID:21070968 NCBI chr18:36,750,732...36,787,067 JBrowse link
G Dis3l DIS3-like exosome 3'-5' exoribonuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:64,803,925...64,840,306 JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:94,802,056...95,184,523 JBrowse link
G Dxo decapping exoribonuclease involved_in ISO
ISS
(PMID:29601584)
(PMID:23523372), (PMID:28283058)
GO_REF:0000024
RGD
UniProt
PMID:23523372 PMID:28283058 PMID:29601584 GO_REF:0000024 NCBI chr20:3,993,322...3,995,484 JBrowse link
G Exosc3 exosome component 3 involved_in ISO (PMID:11782436) RGD PMID:11782436 NCBI chr 5:64,369,495...64,374,711 JBrowse link
G Exosc5 exosome component 5 involved_in ISO (PMID:11782436) RGD PMID:11782436 NCBI chr 1:90,295,495...90,305,047 JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:11782436) RGD PMID:11782436 NCBI chr 2:121,344,154...121,355,110 JBrowse link
G Gas5 growth arrest specific 5 acts_upstream_of_or_within ISO (PMID:33006314) RGD PMID:33006314 NCBI chr13:73,303,611...73,306,932 JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO
ISS
(PMID:10205060)
GO_REF:0000024
RGD
UniProt
PMID:10205060 GO_REF:0000024 NCBI chr20:3,875,411...3,877,866 JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO
ISS
(PMID:10205060)
GO_REF:0000024
RGD
UniProt
PMID:10205060 GO_REF:0000024 NCBI chr20:3,859,756...3,863,800 JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:22844247)
Ensembl
RGD
PMID:22844247 GO_REF:0000107 NCBI chr 9:1,862,555...1,872,403 JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) RGD PMID:12515382 NCBI chr20:3,843,467...3,847,217 JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) RGD PMID:12515382 NCBI chr 4:85,951,073...85,954,289 JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) RGD PMID:12515382 NCBI chr19:29,098,254...29,112,858 JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:29262316) RGD PMID:29262316 NCBI chr10:59,640,915...59,697,291 JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28637692) RGD PMID:28637692 NCBI chr15:27,476,659...27,491,134 JBrowse link
G Mir144 microRNA 144 involved_in ISO MGI:3619412|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:62,961,348...62,961,430 JBrowse link
G Mir451a microRNA 451a involved_in ISO MGI:2676829|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:62,961,520...62,961,591 JBrowse link
G Mirlet7b microRNA let-7b acts_upstream_of_or_within ISO MGI:2676795|MGI:3619050 (PMID:22844247) RGD PMID:22844247 NCBI chr 7:116,804,186...116,804,270 JBrowse link
G Mirlet7c1 microRNA let-7c-1 acts_upstream_of_or_within ISO MGI:2676794|MGI:3619050 (PMID:22844247) RGD PMID:22844247 NCBI chr11:16,201,163...16,201,256 JBrowse link
G Mirlet7c2 microRNA let7c-2 acts_upstream_of_or_within ISO MGI:2676794|MGI:2676795 (PMID:22844247) RGD PMID:22844247 NCBI chr 7:116,803,771...116,803,865 JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:20133598) RGD PMID:20133598 NCBI chr 1:78,635,668...78,637,128 JBrowse link
G Nudt12 nudix hydrolase 12 involved_in ISO (PMID:31101919) RGD PMID:31101919 NCBI chr 9:98,741,627...98,755,039 JBrowse link
G Nudt16 nudix hydrolase 16 involved_in ISO
IBA
(PMID:21070968), (PMID:21337011)
GO_REF:0000033
RGD
GO_Central
PMID:21070968 PMID:21337011 GO_REF:0000033 NCBI chr 8:105,739,927...105,741,982 JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 NOT|involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,636,174...10,638,090 JBrowse link
G Nudt16l2 nudix hydrolase 16 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:105,754,821...105,756,548 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:12721301), (PMID:16055741) RGD PMID:12721301 PMID:16055741 NCBI chr14:102,877,553...102,908,696 JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:30930054)
UniProt
GO_Central
Ensembl
RGD
PMID:30930054 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:65,691,429...65,705,257 JBrowse link
G Slfn14 schlafen family member 14 involved_in ISO (PMID:25996083) RGD PMID:25996083 NCBI chr10:68,076,326...68,087,794 JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000104
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000104 NCBI chr 4:57,095,205...57,494,501 JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054)
(PMID:29855337), (PMID:30065315), (PMID:30150673)
RGD PMID:27558897 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 More... NCBI chr 5:144,381,426...144,407,126 JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:26000482) RGD PMID:26000482 NCBI chr 5:142,661,193...142,670,051 JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D acts_upstream_of_or_within ISO MGI:5588370 (PMID:24415781) RGD PMID:24415781 NCBI chr 1:2,313,110...2,348,820 JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:10751406), (PMID:11782475)
(PMID:10330172), (PMID:20221403)
UniProt
RGD
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 GO_REF:0000024 NCBI chr 1:92,796,628...92,799,108 JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within IDA PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chr 6:98,930,705...98,935,748 JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:34611029)
(PMID:22367205)
RGD PMID:22367205 PMID:34611029 NCBI chr 6:16,242,622...16,246,662 JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (PMID:1370712) RGD PMID:1370712 NCBI chr 7:91,115,894...91,263,823 JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISS
ISO
GO_REF:0000024
(PMID:36859428)
(PMID:34048572), (PMID:37257451)
UniProt
RGD
PMID:34048572 PMID:36859428 PMID:37257451 GO_REF:0000024 NCBI chr10:45,844,411...45,865,853 JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in IDA PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr 3:97,380,407...97,455,253 JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within ISO (PMID:17452450) RGD PMID:17452450 NCBI chr14:13,714,475...13,806,481 JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IMP RGD PMID:26682942 RGD:329961560 NCBI chr12:2,640,936...2,684,787 JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in ISO
IEA
ISS
(PMID:28002401), (PMID:30197295)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28002401 PMID:30197295 GO_REF:0000024 GO_REF:0000107 NCBI chr19:31,456,749...31,865,011 JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:30067974)
UniProt
Ensembl
RGD
PMID:30067974 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,590 JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in ISO (PMID:21658585) RGD PMID:21658585 NCBI chr10:54,350,577...54,370,964 JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) RGD PMID:27157137 NCBI chr 9:95,449,143...95,574,927 JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R IMP RGD PMID:15798208 RGD:9854643 NCBI chr 5:153,826,482...153,872,272 JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:24394384), (PMID:28965759) RGD PMID:24394384 PMID:28965759 NCBI chr 2:211,530,598...211,546,845 JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:29262316) RGD PMID:29262316 NCBI chr10:59,640,915...59,697,291 JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:24394384), (PMID:25456834), (PMID:25569111), (PMID:28637692), (PMID:28792938), (PMID:28965759) RGD PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... NCBI chr15:27,476,659...27,491,134 JBrowse link
G Mir144 microRNA 144 involved_in ISO MGI:3619412|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:62,961,348...62,961,430 JBrowse link
G Mir451a microRNA 451a involved_in ISO MGI:2676829|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:62,961,520...62,961,591 JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr 1:259,897,663...259,901,561 JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr 1:78,635,668...78,637,128 JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr19:23,978,465...23,988,933 JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in ISO (PMID:25768905) RGD PMID:25768905 NCBI chr 5:148,120,712...148,238,468 JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,275,681...18,288,231 JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO
IEA
ISS
(PMID:30930054)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:30930054 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,691,429...65,705,257 JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:29353861)
Ensembl
RGD
PMID:29353861 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218 JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:29353861) RGD PMID:29353861 NCBI chr 6:45,407,823...45,502,773 JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO
IBA
(PMID:32492408)
(PMID:32943573)
GO_REF:0000033
RGD
GO_Central
PMID:32492408 PMID:32943573 GO_REF:0000033 NCBI chr 3:188,402,228...188,417,740 JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO
IBA
(PMID:27558897), (PMID:28106072), (PMID:30559377), (PMID:30930054), (PMID:32169943), (PMID:32492408)
(PMID:29855337), (PMID:30065315), (PMID:30150673), (PMID:31959747), (PMID:32943573)
GO_REF:0000033
RGD
GO_Central
PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 More... GO_REF:0000033 NCBI chr 5:144,381,426...144,407,126 JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO
IBA
(PMID:28106072), (PMID:32492408)
(PMID:32943573)
GO_REF:0000033
RGD
GO_Central
PMID:28106072 PMID:32492408 PMID:32943573 GO_REF:0000033 NCBI chr 2:100,266,942...100,300,896 JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (PMID:15480992) RGD PMID:15480992 NCBI chr 4:155,800,030...155,828,515 JBrowse link
G Axin2 axin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:17072303)
Ensembl
RGD
PMID:17072303 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579 JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISS
ISO
GO_REF:0000024
(PMID:11574538)
UniProt
RGD
PMID:11574538 GO_REF:0000024 NCBI chr 7:10,184,515...10,189,623 JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:22844247) RGD PMID:22844247 NCBI chr 6:123,627,529...123,692,278 JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,378,692...28,381,316 JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO
IEA
(PMID:15766563)
GO_REF:0000107
RGD
Ensembl
PMID:15766563 GO_REF:0000107 NCBI chr 3:163,524,739...163,535,563 JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285 PMID:32354837 NCBI chr14:78,056,115...78,099,846 JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:24394384), (PMID:27609837)
(PMID:14976220), (PMID:21613615)
(PMID:21613615)
(PMID:19029303), (PMID:31358969)
UniProt
RGD
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... GO_REF:0000024 NCBI chr12:2,640,936...2,684,787 JBrowse link
G Fam76b family with sequence similarity 76, member B involved_in ISO (PMID:38421448) RGD PMID:38421448 NCBI chr 8:18,971,357...18,993,442 JBrowse link
G Fus Fus RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:182,576,479...182,590,417 JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO
IEA
ISS
(PMID:12358785)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12358785 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:58,621,327...58,647,242 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:92,609,791...92,618,580 JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO MGI:3707541 (PMID:21822257) RGD PMID:21822257 NCBI chr13:45,264,404...45,290,737 JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091 PMID:28673543 NCBI chr10:42,191,378...42,246,361 JBrowse link
G Larp1bl La ribonucleoprotein 1B like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:123,969,408...124,031,645 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO MGI:2179724 (PMID:11741878) RGD PMID:11741878 NCBI chr13:45,066,027...45,112,326 JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in IBA
ISO
GO_REF:0000033
(PMID:26742488)
GO_Central
RGD
PMID:26742488 GO_REF:0000033 NCBI chr10:87,628,807...87,646,485 JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:29290617) RGD PMID:29290617 NCBI chr 2:211,530,598...211,546,845 JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:164,167,985...164,277,438 JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(PMID:22073225)
UniProt
RGD
PMID:22073225 GO_REF:0000024 NCBI chr 2:137,422,074...137,442,282 JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:119,405,103...119,446,861 JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IMP
ISO
(PMID:32732889) RGD PMID:32732889 PMID:16855020 RGD:10045995 NCBI chr 1:50,387,716...50,501,568 JBrowse link
G Rbm10 RNA binding motif protein 10 IMP RGD PMID:19508861 RGD:151667451 NCBI chr  X:1,540,399...1,572,571 JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
(PMID:29104163)
GO_REF:0000033
RGD
GO_Central
PMID:29104163 GO_REF:0000033 NCBI chr17:18,275,681...18,288,231 JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (PMID:25397698) RGD PMID:25397698 NCBI chr 2:168,198,324...168,242,011 JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27956496)
Ensembl
RGD
PMID:27956496 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573 JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857755 (PMID:9009318)
Ensembl
RGD
PMID:9009318 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr10:73,335,519...73,342,549 JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:68,770,408...68,802,458 JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:95,102,349...95,109,100 JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:145,695,358...145,702,668 JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO
IBA
IEA
ISS
(PMID:28931820)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:28931820 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:190,541,668...190,563,902 JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:72,901,287...72,974,562 JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS
(PMID:18794151)
GO_REF:0000024
RGD
UniProt
PMID:18794151 GO_REF:0000024 NCBI chr 5:143,729,821...143,772,105 JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr 3:28,740,098...28,764,752 JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO (PMID:17785852), (PMID:21822258) RGD PMID:17785852 PMID:21822258 NCBI chr20:43,011,405...43,054,654 JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr13:103,569,944...103,618,747 JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:22,452,854...22,468,194 JBrowse link
G Vip vasoactive intestinal peptide involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:44,470,232...44,478,561 JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:31358969)
UniProt
RGD
PMID:31358969 GO_REF:0000024 NCBI chr 5:138,167,444...138,188,155 JBrowse link
G Ybx2 Y box binding protein 2 acts_upstream_of_or_within ISO MGI:3576937 (PMID:17035640) RGD PMID:17035640 NCBI chr10:54,659,719...54,665,371 JBrowse link
G Zar1 zygote arrest 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:36264786)
UniProt
RGD
PMID:36264786 GO_REF:0000024 NCBI chr14:35,193,446...35,197,382 JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 involved_in ISS
ISO
GO_REF:0000024
(PMID:27563065)
UniProt
RGD
PMID:27563065 GO_REF:0000024 NCBI chr 6:118,006,420...118,044,480 JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:28525753) RGD PMID:28525753 NCBI chr10:59,640,915...59,697,291 JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:31868295)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31868295 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:50,387,716...50,501,568 JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO (PMID:21606497) RGD PMID:21606497 NCBI chr 1:92,796,628...92,799,108 JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in
ISO (PMID:15572351)
MGI:2179456 (PMID:10601318), (PMID:14663139)
(PMID:11371636)
RGD PMID:10601318 PMID:11371636 PMID:14663139 PMID:15572351 NCBI chr 5:159,540,715...159,553,639 JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO
IEA
(PMID:11371636)
GO_REF:0000107
RGD
Ensembl
PMID:11371636 GO_REF:0000107 NCBI chr 5:169,804,873...169,817,157 JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:159,910,242...159,928,201 JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:10,942,534...10,950,654 JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in ISO UniProtKB:P10619 (PMID:12505983) RGD PMID:12505983 NCBI chr 3:153,569,106...153,574,983 JBrowse link
G Snca synuclein alpha involved_in ISO
IEA
(PMID:20697033)
GO_REF:0000107
RGD
Ensembl
PMID:20697033 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444 JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) RGD PMID:32354837 NCBI chr14:78,056,115...78,099,846 JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin IDA RGD PMID:2001740 RGD:9590215 NCBI chr  X:1,619,030...1,634,456 JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:136,336,923...136,340,796 JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISS
ISO
GO_REF:0000024
(PMID:18606867)
UniProt
RGD
PMID:18606867 GO_REF:0000024 NCBI chr 1:152,046,515...152,056,675 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23129660)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23129660 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,653,681...8,670,460 JBrowse link
G Svip small VCP interacting protein involved_in IDA
IBA
ISO
IEA
PMID:17000876
GO_REF:0000033
(PMID:17872946)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:17872946 PMID:17000876 GO_REF:0000033 GO_REF:0000107, RGD:10047192 NCBI chr 1:101,587,128...101,592,818 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:205,765,309...205,769,234 JBrowse link
G Ubxn2a UBX domain protein 2A involved_in ISS
ISO
GO_REF:0000024
(PMID:26265139)
UniProt
RGD
PMID:26265139 GO_REF:0000024 NCBI chr 6:27,884,364...27,912,767 JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO
IBA
(PMID:19135427)
GO_REF:0000033
RGD
GO_Central
PMID:19135427 GO_REF:0000033 NCBI chr18:1,018,111...1,057,727 JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:29,088,283...29,198,323 JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (PMID:14581480) RGD PMID:14581480 NCBI chr10:28,255,025...28,373,418 JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:207,272,738...207,421,998 JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in ISO (PMID:22225877) RGD PMID:22225877 NCBI chr16:56,830,011...56,842,395 JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO
IEA
(PMID:22848640)
GO_REF:0000107
RGD
Ensembl
PMID:22848640 GO_REF:0000107 NCBI chr 8:78,986,252...79,022,638 JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA
(PMID:16912035)
GO_REF:0000107
RGD
Ensembl
PMID:16912035 GO_REF:0000107 NCBI chr 1:143,757,389...143,770,430 JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO
IEA
ISS
(PMID:25588945)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25588945 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,434,525...65,477,386 JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISS
ISO
GO_REF:0000024
MGI:1857830 (PMID:25592972), (PMID:26467158)
UniProt
RGD
PMID:25592972 PMID:26467158 GO_REF:0000024 NCBI chr 7:111,708,353...111,761,825 JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO (PMID:27444016) RGD PMID:27444016 NCBI chr 3:113,962,136...114,009,683 JBrowse link
G