Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:twitch skeletal muscle contraction
go back to main search page
Accession:GO:0014721 term browser browse the term
Definition:A process in which force is generated within twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The twitch skeletal muscle responds to neurostimulations with a contraction followed by a relaxation.


show annotations for term's descendants           Sort by:
fast-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Synm synemin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5548847 (PMID:25567810)		 GO_Central
RGD		 PMID:25567810 GO_REF:0000033 NCBI chr 1:121,333,712...121,363,652
Ensembl chr 1:121,333,720...121,363,652 		JBrowse link
positive regulation of fast-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005775.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Actn3 actinin alpha 3 involved_in ISO (PMID:18178581) RGD PMID:18178581 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISO
IEA
ISS		 (PMID:12479237)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12479237 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:181,026,606...181,044,859
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Mylk2 myosin light chain kinase 2 IMP RGD PMID:12748068 RGD:1580242 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728 		JBrowse link
regulation of slow-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myh7 myosin heavy chain 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:7883988)		 Ensembl
RGD		 PMID:7883988 GO_REF:0000107 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217 		JBrowse link
G Strit1 small transmembrane regulator of ion transport 1 involved_in ISO (PMID:26816378) RGD PMID:26816378 NCBI chr 2:147,935,219...147,938,083
Ensembl chr 2:147,935,222...147,938,083 		JBrowse link
slow-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mb myoglobin IEP RGD PMID:15981298 RGD:1582404 NCBI chr 7:108,759,903...108,767,134
Ensembl chr 7:108,759,904...108,767,383 		JBrowse link
G Tnnt1 troponin T1, slow skeletal type involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15788488 GO_REF:0000033, RGD:1599482 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20076
    multicellular organismal process 8906
      multicellular organismal movement 77
        musculoskeletal movement 73
          skeletal muscle contraction 56
            voluntary skeletal muscle contraction 9
              twitch skeletal muscle contraction 9
                fast-twitch skeletal muscle fiber contraction + 5
                regulation of twitch skeletal muscle contraction + 6
                slow-twitch skeletal muscle fiber contraction + 4
Path 2
Term Annotations click to browse term
  biological_process 20076
    multicellular organismal process 8906
      system process 3539
        muscle system process 486
          muscle contraction 345
            striated muscle contraction 202
              skeletal muscle contraction 56
                voluntary skeletal muscle contraction 9
                  twitch skeletal muscle contraction 9
                    fast-twitch skeletal muscle fiber contraction + 5
                    regulation of twitch skeletal muscle contraction + 6
                    slow-twitch skeletal muscle fiber contraction + 4
paths to the root