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ONTOLOGY REPORT - ANNOTATIONS

Term:ATP-dependent activity, acting on RNA
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Accession:GO:0008186 term browser browse the term
Definition:Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of RNA, and it drives another reaction.
Synonyms:exact_synonym: ATPase, acting on RNA;   RNA-dependent adenosinetriphosphatase activity
 related_synonym: ATPase activity, acting on RNA;   RNA-dependent ATPase activity
 alt_id: GO:0004010
 xref: Reactome:R-HSA-9770847 "Spliceosomal P complex dissociates yielding the intron-containing complex (ILS) and the spliced mRNP (new)";   Reactome:R-HSA-9772351 "Disassembly of the Intron Lariat Spliceosome (new)"

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ATP-dependent activity, acting on RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:27477908) UniProt PMID:27477908 NCBI chrNW_004624828:269,444...301,899
Ensembl chrNW_004624828:269,843...302,301 		JBrowse link
G Ddx39b DExD-box helicase 39B enables ISO (PMID:17562711) UniProt PMID:17562711 NCBI chrNW_004624754:24,657,019...24,667,225
Ensembl chrNW_004624754:24,657,914...24,667,579 		JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 enables ISO (PMID:19158098) UniProt PMID:19158098 NCBI chrNW_004624767:18,038,559...18,065,745
Ensembl chrNW_004624767:18,036,650...18,065,742 		JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 enables ISO (PMID:21559518) AgBase PMID:21559518 NCBI chrNW_004624733:8,507,783...8,582,836
Ensembl chrNW_004624733:8,506,626...8,583,191 		JBrowse link
3'-5' DNA/RNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
3'-5' RNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqr aquarius intron-binding spliceosomal factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624804:2,080,295...2,172,643
Ensembl chrNW_004624804:2,083,341...2,173,208 		JBrowse link
G Dhx38 DEAH-box helicase 38 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:14,301,921...14,319,649
Ensembl chrNW_004624746:14,301,922...14,337,152 		JBrowse link
G Dhx40 DEAH-box helicase 40 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624871:1,384,880...1,425,946
Ensembl chrNW_004624871:1,384,900...1,425,954 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:1537828), (PMID:21561811) UniProt PMID:1537828 PMID:21561811 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Supv3l1 Suv3 like RNA helicase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:3,474,235...3,500,215
Ensembl chrNW_004624754:3,474,298...3,500,170 		JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 enables ISO (PMID:29033321)
(PMID:29360036)		 UniProt PMID:29033321 PMID:29360036 NCBI chrNW_004624733:8,507,783...8,582,836
Ensembl chrNW_004624733:8,506,626...8,583,191 		JBrowse link
5'-3' DNA/RNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pif1 PIF1 5'-to-3' DNA helicase enables ISO (PMID:16522649) BHF-UCL PMID:16522649 NCBI chrNW_004624781:7,821,125...7,838,189
Ensembl chrNW_004624781:7,821,683...7,827,692 		JBrowse link
5'-3' RNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ighmbp2 immunoglobulin mu DNA binding protein 2 enables ISO (PMID:19158098) UniProt PMID:19158098 NCBI chrNW_004624767:18,038,559...18,065,745
Ensembl chrNW_004624767:18,036,650...18,065,742 		JBrowse link
G Mov10 Mov10 RNA helicase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624772:8,458,470...8,481,462
Ensembl chrNW_004624772:8,459,517...8,484,972 		JBrowse link
DNA/RNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx1 DEAD-box helicase 1 enables ISO (PMID:18710941) UniProt PMID:18710941 NCBI chrNW_004624865:898,850...927,375
Ensembl chrNW_004624865:898,850...928,091 		JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 enables ISO (PMID:9889278) FlyBase PMID:9889278 NCBI chrNW_004624733:37,246,989...37,279,818
Ensembl chrNW_004624733:37,253,054...37,274,067 		JBrowse link
RNA helicase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx1 DEAD-box helicase 1 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624865:898,850...927,375
Ensembl chrNW_004624865:898,850...928,091 		JBrowse link
G Ddx10 DEAD-box helicase 10 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624784:3,331,137...3,715,356
Ensembl chrNW_004624784:3,331,266...3,713,755 		JBrowse link
G Ddx17 DEAD-box helicase 17 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624752:9,602,267...9,620,770
Ensembl chrNW_004624752:9,602,447...9,620,575 		JBrowse link
G Ddx18 DEAD-box helicase 18 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624732:27,416,851...27,432,397 JBrowse link
G Ddx19b DEAD-box helicase 19B enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624746:12,569,308...12,592,168
Ensembl chrNW_004624746:12,569,331...12,587,821 		JBrowse link
G Ddx20 DEAD-box helicase 20 enables IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624772:7,450,898...7,475,686
Ensembl chrNW_004624772:7,450,616...7,476,054 		JBrowse link
G Ddx21 DExD-box helicase 21 enables IEA UniProt
TreeGrafter		 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624754:3,180,501...3,203,449
Ensembl chrNW_004624754:3,179,662...3,203,536 		JBrowse link
G Ddx23 DEAD-box helicase 23 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624816:3,320,218...3,334,198
Ensembl chrNW_004624816:3,320,065...3,334,559 		JBrowse link
G Ddx24 DEAD-box helicase 24 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624734:10,405,656...10,422,101 JBrowse link
G Ddx25 DEAD-box helicase 25 enables ISO
IEA		 RGD
UniProt
InterPro
Ensembl		 PMID:10608860 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 RGD:68232 NCBI chrNW_004624812:53,129...74,073
Ensembl chrNW_004624812:52,368...74,149 		JBrowse link
G Ddx27 DEAD-box helicase 27 enables IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624790:6,105,222...6,123,022
Ensembl chrNW_004624790:6,100,414...6,123,048 		JBrowse link
G Ddx31 DEAD-box helicase 31 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624760:3,692,248...3,763,887
Ensembl chrNW_004624760:3,692,548...3,765,645 		JBrowse link
G Ddx39a DExD-box helicase 39A enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624901:1,563,557...1,582,502
Ensembl chrNW_004624901:1,563,557...1,582,536 		JBrowse link
G Ddx39b DExD-box helicase 39B enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624754:24,657,019...24,667,225
Ensembl chrNW_004624754:24,657,914...24,667,579 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Ddx4 DEAD-box helicase 4 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624759:3,454,850...3,568,531
Ensembl chrNW_004624759:3,455,543...3,567,605 		JBrowse link
G Ddx41 DEAD-box helicase 41 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624733:12,571,208...12,576,721
Ensembl chrNW_004624733:12,570,402...12,578,019 		JBrowse link
G Ddx42 DEAD-box helicase 42 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624849:1,274,453...1,342,078
Ensembl chrNW_004624849:1,274,453...1,341,232 		JBrowse link
G Ddx43 DEAD-box helicase 43 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624819:597,275...638,463 JBrowse link
G Ddx46 DEAD-box helicase 46 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:12,229,562...12,294,301
Ensembl chrNW_004624733:12,230,678...12,294,258 		JBrowse link
G Ddx47 DEAD-box helicase 47 enables IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624752:25,114,639...25,131,601
Ensembl chrNW_004624752:25,117,016...25,131,911 		JBrowse link
G Ddx49 DEAD-box helicase 49 enables IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624908:1,963,701...1,970,634
Ensembl chrNW_004624908:1,963,738...1,970,634 		JBrowse link
G Ddx5 DEAD-box helicase 5 enables ISO
IEA		 RGD
UniProt
Ensembl
InterPro		 PMID:7525583 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 RGD:5128519 NCBI chrNW_004624870:206,714...214,264
Ensembl chrNW_004624870:204,671...214,156 		JBrowse link
G Ddx50 DExD-box helicase 50 enables IEA UniProt
TreeGrafter		 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624754:3,125,357...3,171,584
Ensembl chrNW_004624754:3,125,155...3,171,584 		JBrowse link
G Ddx52 DExD-box helicase 52 enables IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624871:4,596,313...4,622,634 JBrowse link
G Ddx54 DEAD-box helicase 54 enables IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624747:19,264,836...19,279,251
Ensembl chrNW_004624747:19,264,888...19,278,934 		JBrowse link
G Ddx55 DEAD-box helicase 55 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624747:23,401,267...23,413,002
Ensembl chrNW_004624747:23,401,323...23,412,804 		JBrowse link
G Ddx56 DEAD-box helicase 56 enables IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624740:7,563,932...7,575,700
Ensembl chrNW_004624740:7,563,709...7,572,221 		JBrowse link
G Ddx59 DEAD-box helicase 59 enables IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624807:9,951,423...9,985,656
Ensembl chrNW_004624807:9,951,988...9,986,312 		JBrowse link
G Ddx6 DEAD-box helicase 6 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624784:14,142,051...14,178,845
Ensembl chrNW_004624784:14,142,051...14,178,868 		JBrowse link
G Dhx15 DEAH-box helicase 15 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624755:7,729,985...7,780,263
Ensembl chrNW_004624755:7,728,027...7,783,784 		JBrowse link
G Dhx16 DEAH-box helicase 16 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624754:25,040,684...25,054,632
Ensembl chrNW_004624754:25,040,711...25,057,856 		JBrowse link
G Dhx29 DExH-box helicase 29 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000104 NCBI chrNW_004624759:3,965,543...4,013,600
Ensembl chrNW_004624759:3,965,685...4,013,733 		JBrowse link
G Dhx30 DExH-box helicase 30 enables IEA UniProt
TreeGrafter		 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624730:73,656,378...73,685,863
Ensembl chrNW_004624730:73,656,361...73,681,999 		JBrowse link
G Dhx33 DEAH-box helicase 33 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624786:9,247,294...9,266,645
Ensembl chrNW_004624786:9,248,382...9,266,519 		JBrowse link
G Dhx35 DEAH-box helicase 35 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624842:662,875...734,201
Ensembl chrNW_004624842:664,031...748,166 		JBrowse link
G Dhx36 DEAH-box helicase 36 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:31,857,157...31,913,985
Ensembl chrNW_004624730:31,855,992...31,914,253 		JBrowse link
G Dhx38 DEAH-box helicase 38 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624746:14,301,921...14,319,649
Ensembl chrNW_004624746:14,301,922...14,337,152 		JBrowse link
G Dhx40 DEAH-box helicase 40 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624871:1,384,880...1,425,946
Ensembl chrNW_004624871:1,384,900...1,425,954 		JBrowse link
G Dhx58 DExH-box helicase 58 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Dhx8 DEAH-box helicase 8 enables IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624795:1,092,040...1,117,888
Ensembl chrNW_004624795:1,092,040...1,117,859 		JBrowse link
G Dhx9 DExH-box helicase 9 enables IEA UniProt
TreeGrafter		 GO_REF:0000003 GO_REF:0000118 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Eif4a1 eukaryotic translation initiation factor 4A1 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624786:10,188,326...10,194,466
Ensembl chrNW_004624786:10,188,406...10,194,464 		JBrowse link
G Eif4a2 eukaryotic translation initiation factor 4A2 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624730:69,999,879...70,006,008
Ensembl chrNW_004624730:69,996,219...70,005,910 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624801:9,240,780...9,250,864
Ensembl chrNW_004624801:9,240,780...9,250,863 		JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 enables ISO (PMID:9889278) FlyBase PMID:9889278 NCBI chrNW_004624733:37,246,989...37,279,818
Ensembl chrNW_004624733:37,253,054...37,274,067 		JBrowse link
G Helz2 helicase with zinc finger 2 enables ISO (PMID:37602378) UniProt PMID:37602378 NCBI chrNW_004624741:29,213,954...29,228,567
Ensembl chrNW_004624741:29,212,634...29,228,731 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
G LOC101711814 ATP-dependent RNA helicase DDX3X enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624730:67,911,023...67,913,701 JBrowse link
G LOC101715277 ATP-dependent RNA helicase DDX18-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624732:4,331,422...4,411,477 JBrowse link
G LOC101721083 ATP-dependent RNA helicase DDX19A enables IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000003 NCBI chrNW_004624746:12,595,037...12,618,593
Ensembl chrNW_004624746:12,595,072...12,618,593 		JBrowse link
G LOC101722537 ATP-dependent RNA helicase DHX8-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:15,481,881...15,486,448 JBrowse link
G LOC106007520 helicase SKI2W enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624754:24,290,877...24,299,933
Ensembl chrNW_004624754:24,290,925...24,299,872 		JBrowse link
G LOC106010772 ATP-dependent RNA helicase DDX3X-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624804:400,617...404,139 JBrowse link
G Mov10 Mov10 RNA helicase enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624772:8,458,470...8,481,462
Ensembl chrNW_004624772:8,459,517...8,484,972 		JBrowse link
G Mov10l1 Mov10 like RNA helicase 1 enables ISO (PMID:25762440) UniProt PMID:25762440 NCBI chrNW_004624752:580,580...651,209
Ensembl chrNW_004624752:580,155...651,000 		JBrowse link
G Mtrex Mtr4 exosome RNA helicase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624759:3,868,759...3,965,446
Ensembl chrNW_004624759:3,868,662...3,965,319 		JBrowse link
G Rigi RNA sensor RIG-I enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:2,351,476...2,378,047
Ensembl chrNW_004624749:2,351,373...2,378,159 		JBrowse link
G Supv3l1 Suv3 like RNA helicase enables IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 NCBI chrNW_004624754:3,474,235...3,500,215
Ensembl chrNW_004624754:3,474,298...3,500,170 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624908:1,909,995...1,935,370
Ensembl chrNW_004624908:1,910,315...1,933,655 		JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004624733:8,507,783...8,582,836
Ensembl chrNW_004624733:8,506,626...8,583,191 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18442
    ATP-dependent activity 593
      ATP-dependent activity, acting on RNA 66
        DNA/RNA helicase activity + 4
        RNA helicase activity + 64
        RNA translocase activity 0
paths to the root