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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:coordination entity
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Accession:CHEBI:33240 term browser browse the term
Definition:An assembly consisting of a central atom (usually metallic) to which is attached a surrounding array of other groups of atoms (ligands).
Synonyms:exact_synonym: coordination entities
 related_synonym: coordination compounds



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cadmium dichloride term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OCLN occludin decreases expression EXP Cadmium Chloride results in decreased expression of OCLN protein CTD PMID:18418844 NCBI chr 2:54,500,299...54,545,430
Ensembl chr 2:54,500,299...54,545,430
JBrowse link
lead(II) chloride term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDN1 endothelin 1 increases secretion EXP lead chloride results in increased secretion of EDN1 protein CTD PMID:15915659 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G EDN2 endothelin 2 increases secretion EXP lead chloride results in increased secretion of EDN2 protein CTD PMID:15915659 NCBI chr15:1,647,966...1,654,272
Ensembl chr15:1,648,077...1,654,272
JBrowse link
mercury dichloride term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 multiple interactions
increases expression
EXP ABCC1 protein affects the export of and results in decreased susceptibility to Mercuric Chloride
Mercuric Chloride results in increased expression of ABCC1 mRNA; Mercuric Chloride results in increased expression of ABCC1 protein
CTD PMID:15590114 NCBI chr 6:27,855,702...27,950,140
Ensembl chr 6:27,855,702...27,989,331
JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 multiple interactions
increases expression
EXP ABCC2 protein affects the export of and results in decreased susceptibility to Mercuric Chloride
Mercuric Chloride results in increased expression of ABCC2 mRNA; Mercuric Chloride results in increased expression of ABCC2 protein
CTD PMID:15590114 NCBI chr28:12,670,885...12,740,124
Ensembl chr28:12,670,885...12,740,740
JBrowse link
G LOC100686073 metallothionein-1 increases expression EXP Mercuric Chloride results in increased expression of MT1 mRNA CTD PMID:15590114 NCBI chr 2:59,603,021...59,604,173
Ensembl chr 2:59,603,014...59,604,132
JBrowse link
G MT2A metallothionein 1H increases expression EXP Mercuric Chloride results in increased expression of MT2 mRNA CTD PMID:15590114 NCBI chr 2:59,607,926...59,608,825
Ensembl chr 2:59,607,927...59,626,727
JBrowse link
nitroprusside term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POMC proopiomelanocortin increases expression EXP Nitroprusside results in increased expression of POMC protein CTD PMID:2831029 NCBI chr17:19,431,396...19,438,247
Ensembl chr17:19,431,585...19,434,440
JBrowse link
G REN renin increases activity EXP Nitroprusside results in increased activity of REN protein CTD PMID:2434793 PMID:6399253 NCBI chr38:744,540...766,998
Ensembl chr38:744,614...755,012
JBrowse link
G WT1 WT1 transcription factor multiple interactions EXP [Nitroprusside results in increased abundance of Nitric Oxide] which results in increased expression of WT1 mRNA CTD PMID:21443142 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000
JBrowse link
phosphoryl trichloride term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCHE butyrylcholinesterase decreases activity EXP phosphoryl chloride results in decreased activity of BCHE protein CTD PMID:12641435 NCBI chr34:30,912,632...30,977,624
Ensembl chr34:30,912,632...30,977,583
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 409
    chemical entity 409
      molecular entity 400
        polyatomic entity 402
          heteroatomic molecular entity 344
            coordination entity 11
              coronate + 0
              halometallate anion + 0
              main-group coordination entity + 3
              metal carbonyl + 0
              metalloporphyrin + 0
              nitrometallate anion + 0
              transition element coordination entity + 3
              zinc group coordination entity + 5
Path 2
Term Annotations click to browse term
  CHEBI ontology 409
    subatomic particle 400
      composite particle 409
        hadron 409
          baryon 409
            nucleon 409
              atomic nucleus 409
                atom 400
                  group 394
                    polyatomic entity 402
                      heteroatomic molecular entity 344
                        coordination entity 11
                          coronate + 0
                          halometallate anion + 0
                          main-group coordination entity + 3
                          metal carbonyl + 0
                          metalloporphyrin + 0
                          nitrometallate anion + 0
                          transition element coordination entity + 3
                          zinc group coordination entity + 5
paths to the root