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ONTOLOGY REPORT - ANNOTATIONS


Term:gibberellin A3
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Accession:CHEBI:28833 term browser browse the term
Definition:A C19-gibberellin that is a pentacyclic diterpenoid responsible for promoting growth and elongation of cells in plants. Initially identified in Gibberella fujikuroi,it differs from gibberellin A1 in the presence of a double bond between C-3 and C-4.
Synonyms:exact_synonym: (1R,2R,5S,8S,9S,10R,11S,12S)-5,12-dihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1(5,8).0(1,10).0(2,8)]heptadec-13-ene-9-carboxylic acid;   2beta,7alpha-dihydroxy-1beta-methyl-8-methylidene-13-oxo-4a,1alpha-epoxymethano-4aalpha,4bbeta-gibb-3-ene-10beta-carboxylic acid
 related_synonym: Formula=C19H22O6;   GA3;   Gibberellic acid;   Gibberellin;   Gibberellinsaeure;   InChI=1S/C19H22O6/c1-9-7-17-8-18(9,24)5-3-10(17)19-6-4-11(20)16(2,15(23)25-19)13(19)12(17)14(21)22/h4,6,10-13,20,24H,1,3,5,7-8H2,2H3,(H,21,22)/t10-,11+,12-,13-,16-,17+,18+,19-/m1/s1;   InChIKey=IXORZMNAPKEEDV-OBDJNFEBSA-N;   SMILES=[H][C@@]12CC[C@]3(O)C[C@]1(CC3=C)[C@@H](C(O)=O)[C@]1([H])[C@@]3(C)[C@@H](O)C=C[C@@]21OC3=O;   gibberellic acid GA3;   gibberellin 3
 alt_id: CHEBI:24243;   CHEBI:5340
 xref: AGR:IND44675921;   BPDB:371;   Beilstein:54346;   CAS:77-06-5;   DrugBank:DB07814;   HMDB:HMDB0003559;   KEGG:C01699;   KNApSAcK:C00000003;   LIPID_MAPS_instance:LMPR0104170002
 xref_mesh: MESH:C007842
 xref: MetaCyc:GIBBERELLIN;   PDBeChem:GA3;   PMID:18948165;   PMID:19815399;   PMID:21216576;   PMID:22044348;   PMID:22516192;   PMID:23076568;   PMID:23818834;   PMID:23857350;   PMID:24232845;   Reaxys:54346;   Wikipedia:Gibberellic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:58590


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gibberellin A3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:6480464
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:6480464
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:6480464
G Dnmt3b DNA methyltransferase 3 beta JBrowse link 3 149,131,541 149,170,061 RGD:6480464
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19779
    role 19727
      biological role 19726
        biochemical role 19220
          metabolite 19196
            eukaryotic metabolite 18814
              plant metabolite 17320
                gibberellin A3 6
                  gibberellin A3 O-beta-D-glucoside 0
                  gibberellin A3 methyl ester 0
                  gibberellin A3 norketone 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19779
    subatomic particle 19777
      composite particle 19777
        hadron 19777
          baryon 19777
            nucleon 19777
              atomic nucleus 19777
                atom 19777
                  main group element atom 19664
                    main group molecular entity 19664
                      s-block molecular entity 19406
                        hydrogen molecular entity 19397
                          hydrides 18386
                            organic hydride 17747
                              organic fundamental parent 17747
                                hydrocarbon 17257
                                  terpene 9512
                                    terpenoid 9507
                                      diterpenoid 8330
                                        gibberellin 6
                                          C19-gibberellin 6
                                            gibberellin A3 6
                                              gibberellin A3 O-beta-D-glucoside 0
                                              gibberellin A3 methyl ester 0
                                              gibberellin A3 norketone 0
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