Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:gibberellin
go back to main search page
Accession:CHEBI:24250 term browser browse the term
Synonyms:related_synonym: gibberellins
 cyclic_relationship: is_conjugate_acid_of CHEBI:59139


show annotations for term's descendants           Sort by:
 
gibberellin A3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 multiple interactions
increases expression
EXP Decitabine promotes the reaction [gibberellic acid results in increased expression of CASP3 mRNA]; gibberellic acid promotes the reaction [Decitabine results in increased expression of CASP3 mRNA]
gibberellic acid results in increased expression of CASP3 mRNA; gibberellic acid results in increased expression of CASP3 protein
CTD PMID:31733319 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Casp8 caspase 8 decreases methylation
increases expression
EXP gibberellic acid results in decreased methylation of CASP8 gene; gibberellic acid results in decreased methylation of CASP8 promoter
gibberellic acid results in increased expression of CASP8 mRNA; gibberellic acid results in increased expression of CASP8 protein
CTD PMID:31733319 NCBI chr 9:65,614,142...65,662,624
Ensembl chr 9:65,614,142...65,662,106
JBrowse link
G Casp9 caspase 9 increases expression EXP gibberellic acid results in increased expression of CASP9 mRNA; gibberellic acid results in increased expression of CASP9 protein CTD PMID:31733319 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha decreases expression EXP gibberellic acid results in decreased expression of DNMT3A mRNA CTD PMID:31733319 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta decreases expression EXP gibberellic acid results in decreased expression of DNMT3B mRNA CTD PMID:31733319 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Fas Fas cell surface death receptor increases expression EXP gibberellic acid results in increased expression of FAS mRNA; gibberellic acid results in increased expression of FAS protein CTD PMID:31733319 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19767
    role 19714
      biological role 19714
        molecular messenger 18300
          hormone 18071
            plant hormone 4939
              gibberellin 6
                C19-gibberellin + 6
                C20-gibberellin + 0
                gibberellin ester + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19767
    subatomic particle 19766
      composite particle 19766
        hadron 19766
          baryon 19766
            nucleon 19766
              atomic nucleus 19766
                atom 19766
                  main group element atom 19657
                    main group molecular entity 19657
                      s-block molecular entity 19421
                        hydrogen molecular entity 19414
                          hydrides 18754
                            organic hydride 18358
                              organic fundamental parent 18358
                                hydrocarbon 18075
                                  terpene 12619
                                    terpenoid 12182
                                      diterpenoid 11402
                                        gibberellin 6
                                          C19-gibberellin + 6
                                          C20-gibberellin + 0
                                          gibberellin ester + 0
paths to the root