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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:gibberellin
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Accession:CHEBI:24250 term browser browse the term
Synonyms:related_synonym: gibberellins
 cyclic_relationship: is_conjugate_acid_of CHEBI:59139



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gibberellin A3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 multiple interactions
increases expression
EXP Decitabine promotes the reaction [gibberellic acid results in increased expression of CASP3 mRNA]; gibberellic acid promotes the reaction [Decitabine results in increased expression of CASP3 mRNA]
gibberellic acid results in increased expression of CASP3 mRNA; gibberellic acid results in increased expression of CASP3 protein
CTD PMID:31733319 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Casp8 caspase 8 decreases methylation
increases expression
EXP gibberellic acid results in decreased methylation of CASP8 gene; gibberellic acid results in decreased methylation of CASP8 promoter
gibberellic acid results in increased expression of CASP8 mRNA; gibberellic acid results in increased expression of CASP8 protein
CTD PMID:31733319 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
JBrowse link
G Casp9 caspase 9 increases expression EXP gibberellic acid results in increased expression of CASP9 mRNA; gibberellic acid results in increased expression of CASP9 protein CTD PMID:31733319 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha decreases expression EXP gibberellic acid results in decreased expression of DNMT3A mRNA CTD PMID:31733319 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta decreases expression EXP gibberellic acid results in decreased expression of DNMT3B mRNA CTD PMID:31733319 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Fas Fas cell surface death receptor increases expression EXP gibberellic acid results in increased expression of FAS mRNA; gibberellic acid results in increased expression of FAS protein CTD PMID:31733319 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20050
    role 20001
      biological role 20000
        molecular messenger 18528
          hormone 18335
            plant hormone 8495
              gibberellin 6
                C19-gibberellin + 6
                C20-gibberellin + 0
                gibberellin ester + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20050
    subatomic particle 20048
      composite particle 20048
        hadron 20048
          baryon 20048
            nucleon 20048
              atomic nucleus 20048
                atom 20048
                  main group element atom 19948
                    main group molecular entity 19948
                      s-block molecular entity 19735
                        hydrogen molecular entity 19727
                          hydrides 19093
                            organic hydride 18613
                              organic fundamental parent 18613
                                hydrocarbon 18366
                                  terpene 12747
                                    terpenoid 12316
                                      diterpenoid 11535
                                        gibberellin 6
                                          C19-gibberellin + 6
                                          C20-gibberellin + 0
                                          gibberellin ester + 0
paths to the root