Xcl1 (X-C motif chemokine ligand 1) - Rat Genome Database

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Gene: Xcl1 (X-C motif chemokine ligand 1) Rattus norvegicus
Analyze
Symbol: Xcl1
Name: X-C motif chemokine ligand 1
RGD ID: 620452
Description: Predicted to enable CCR chemokine receptor binding activity; chemokine activity; and protein homodimerization activity. Predicted to be involved in several processes, including positive regulation of leukocyte migration; regulation of alpha-beta T cell activation; and regulation of gene expression. Predicted to act upstream of or within chemotaxis; establishment of localization in cell; and release of sequestered calcium ion into cytosol. Predicted to be active in extracellular space. Biomarker of anti-basement membrane glomerulonephritis. Orthologous to several human genes including XCL1 (X-C motif chemokine ligand 1); PARTICIPATES IN chemokine mediated signaling pathway; INTERACTS WITH 1,2,4-trimethylbenzene; 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: c motif chemokine 1; chemokine (C motif) ligand 1; cytokine SCM-1; Ltn; lymphotactin; Scyc1; small inducible cytokine subfamily C, member 1 (lymphotactin); small-inducible cytokine C1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81379,781,784 - 79,785,440 (-)NCBIGRCr8
mRatBN7.21377,248,687 - 77,252,343 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1377,248,717 - 77,252,329 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1379,865,290 - 79,868,746 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01381,169,308 - 81,172,764 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01378,411,156 - 78,414,618 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01383,199,402 - 83,202,845 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1383,199,264 - 83,202,864 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01388,079,753 - 88,083,196 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41380,691,195 - 80,694,638 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11380,705,382 - 80,708,826 (-)NCBI
Celera1376,965,267 - 76,968,710 (-)NCBICelera
Cytogenetic Map13q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
antimicrobial humoral immune response mediated by antimicrobial peptide  (IBA,ISO)
cell-cell signaling  (ISO)
cellular response to interleukin-4  (IEA,ISO)
cellular response to transforming growth factor beta stimulus  (IEA,ISO)
chemokine-mediated signaling pathway  (IBA)
chemotaxis  (ISO)
eosinophil chemotaxis  (IBA)
establishment of localization in cell  (IEA,ISO)
immune response  (IEA)
inflammatory response  (IBA)
mature natural killer cell chemotaxis  (IEA,ISO)
negative regulation of CD4-positive, alpha-beta T cell proliferation  (ISO)
negative regulation of DNA-binding transcription factor activity  (ISO)
negative regulation of DNA-templated transcription  (ISO)
negative regulation of interleukin-2 production  (ISO)
negative regulation of T cell cytokine production  (ISO)
negative regulation of T-helper 1 cell activation  (ISO)
negative regulation of type II interferon production  (ISO)
positive regulation of B cell chemotaxis  (IEA,ISO)
positive regulation of CD4-positive, alpha-beta T cell proliferation  (IEA,ISO)
positive regulation of CD8-positive, alpha-beta T cell proliferation  (ISO)
positive regulation of cell migration  (IBA)
positive regulation of granzyme A production  (ISO)
positive regulation of granzyme B production  (ISO)
positive regulation of immunoglobulin production in mucosal tissue  (IEA,ISO)
positive regulation of interleukin-10 production  (ISO)
positive regulation of leukocyte chemotaxis  (ISO)
positive regulation of natural killer cell chemotaxis  (IEA,ISO)
positive regulation of neutrophil chemotaxis  (IEA,ISO)
positive regulation of release of sequestered calcium ion into cytosol  (ISO)
positive regulation of T cell chemotaxis  (IEA,ISO)
positive regulation of T cell cytokine production  (ISO)
positive regulation of T cell mediated cytotoxicity  (ISO)
positive regulation of T-helper 1 cell cytokine production  (IEA,ISO)
positive regulation of T-helper 2 cell cytokine production  (IEA,ISO)
positive regulation of thymocyte migration  (IEA,ISO)
positive regulation of transforming growth factor beta production  (ISO)
regulation of inflammatory response  (ISO)
release of sequestered calcium ion into cytosol  (IEA,ISO)
response to virus  (ISO)
signal transduction  (IEA)

Cellular Component
extracellular space  (IBA,IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Mechanisms of host defense following severe acute respiratory syndrome-coronavirus (SARS-CoV) pulmonary infection of mice. Glass WG, etal., J Immunol. 2004 Sep 15;173(6):4030-9. doi: 10.4049/jimmunol.173.6.4030.
3. Lymphotactin: a cytokine that represents a new class of chemokine. Kelner GS, etal., Science 1994 Nov 25;266(5189):1395-9.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Expression of lymphotactin mRNA in experimental crescentic glomerulonephritis. Natori Y, etal., Clin Exp Immunol. 1998 Aug;113(2):265-8.
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. GOA pipeline RGD automated data pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7602097   PMID:8757601   PMID:9013979   PMID:9029087   PMID:9632725   PMID:9973465   PMID:10518929   PMID:10887101   PMID:11181058   PMID:11889129   PMID:12949249   PMID:14734774  
PMID:18832695   PMID:24155383   PMID:29588250   PMID:31649144  


Genomics

Comparative Map Data
Xcl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81379,781,784 - 79,785,440 (-)NCBIGRCr8
mRatBN7.21377,248,687 - 77,252,343 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1377,248,717 - 77,252,329 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1379,865,290 - 79,868,746 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01381,169,308 - 81,172,764 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01378,411,156 - 78,414,618 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01383,199,402 - 83,202,845 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1383,199,264 - 83,202,864 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01388,079,753 - 88,083,196 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41380,691,195 - 80,694,638 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11380,705,382 - 80,708,826 (-)NCBI
Celera1376,965,267 - 76,968,710 (-)NCBICelera
Cytogenetic Map13q23NCBI
XCL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381168,576,605 - 168,582,069 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1168,576,605 - 168,582,069 (+)EnsemblGRCh38hg38GRCh38
GRCh371168,545,843 - 168,551,307 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361166,812,480 - 166,817,939 (+)NCBINCBI36Build 36hg18NCBI36
Build 341165,277,513 - 165,282,973NCBI
Celera1141,655,651 - 141,661,108 (+)NCBICelera
Cytogenetic Map1q24.2NCBI
HuRef1139,791,807 - 139,797,411 (+)NCBIHuRef
CHM1_11169,967,701 - 169,973,305 (+)NCBICHM1_1
T2T-CHM13v2.01167,929,278 - 167,937,161 (+)NCBIT2T-CHM13v2.0
Xcl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,759,216 - 164,763,094 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1164,759,213 - 164,763,096 (-)EnsemblGRCm39 Ensembl
GRCm381164,931,644 - 164,935,522 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1164,931,644 - 164,935,527 (-)EnsemblGRCm38mm10GRCm38
MGSCv371166,861,779 - 166,865,641 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361166,768,323 - 166,772,185 (-)NCBIMGSCv36mm8
Celera1167,368,241 - 167,372,103 (-)NCBICelera
Cytogenetic Map1H2.2NCBI
cM Map172.26NCBI
Xcl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554628,594,416 - 8,598,101 (-)NCBIChiLan1.0ChiLan1.0
LOC100978961
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2181,183,655 - 81,414,929 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1180,852,442 - 81,083,586 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01143,837,578 - 144,068,261 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11147,563,331 - 147,790,587 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1147,785,654 - 147,790,587 (+)Ensemblpanpan1.1panPan2
LOC490356
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1729,986,433 - 29,991,096 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha729,518,512 - 29,708,129 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0729,804,708 - 29,995,081 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1729,637,969 - 29,827,991 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0729,673,524 - 29,863,628 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0729,911,837 - 30,102,031 (-)NCBIUU_Cfam_GSD_1.0
LOC101970885
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934499,978,802 - 99,991,355 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648117,825,714 - 17,828,955 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
XCL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl482,432,204 - 82,436,180 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1482,432,845 - 82,436,150 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2490,116,396 - 90,119,701 (-)NCBISscrofa10.2Sscrofa10.2susScr3
XCL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366605562,128,985 - 62,134,506 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Xcl1
69 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:19
Count of miRNA genes:15
Interacting mature miRNAs:18
Transcripts:ENSRNOT00000003976
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133466346187525369Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)136906051986800898Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136906051986800898Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)136906051986800898Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1366451204106807694Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)137486211785581182Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)137402391880753406Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat

Markers in Region
AI236158  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21377,248,803 - 77,248,924 (+)MAPPERmRatBN7.2
Rnor_6.01383,199,341 - 83,199,461NCBIRnor6.0
Rnor_5.01388,079,692 - 88,079,812UniSTSRnor5.0
RGSC_v3.41380,691,134 - 80,691,254UniSTSRGSC3.4
Celera1376,965,206 - 76,965,326UniSTS
RH 3.4 Map13485.8UniSTS
Cytogenetic Map13q23UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 9 39 70 90 90 59 25 59 6 202 82 51 44 57 31

Sequence


Ensembl Acc Id: ENSRNOT00000003976   ⟹   ENSRNOP00000003976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1377,248,717 - 77,252,329 (-)Ensembl
Rnor_6.0 Ensembl1383,199,264 - 83,202,864 (-)Ensembl
RefSeq Acc Id: NM_134361   ⟹   NP_599188
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81379,781,784 - 79,785,440 (-)NCBI
mRatBN7.21377,248,687 - 77,252,343 (-)NCBI
Rnor_6.01383,199,402 - 83,202,845 (-)NCBI
Rnor_5.01388,079,753 - 88,083,196 (-)NCBI
RGSC_v3.41380,691,195 - 80,694,638 (-)RGD
Celera1376,965,267 - 76,968,710 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_599188 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA69478 (Get FASTA)   NCBI Sequence Viewer  
  EDM09342 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000003976.1
GenBank Protein P51672 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_599188   ⟸   NM_134361
- Peptide Label: precursor
- UniProtKB: G3V6D4 (UniProtKB/TrEMBL),   A6IDF5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000003976   ⟸   ENSRNOT00000003976
Protein Domains
Chemokine interleukin-8-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P51672-F1-model_v2 AlphaFold P51672 1-114 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620452 AgrOrtholog
BioCyc Gene G2FUF-17583 BioCyc
Ensembl Genes ENSRNOG00000002964 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000003976.4 UniProtKB/TrEMBL
Gene3D-CATH 2.40.50.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Chemokine_b/g/d UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Chemokine_IL8-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Chemokine_XCL1/XCL2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Interleukin_8-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:171371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 171371 ENTREZGENE
PANTHER PTHR12015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12015:SF101 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam IL8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Xcl1 PhenoGen
PRINTS LYMPHOTACTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002964 RatGTEx
SMART SCY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54117 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A4D6YKM5_RAT UniProtKB/TrEMBL
  A0A4D6YMT2_RAT UniProtKB/TrEMBL
  A0A4D6YMU3_RAT UniProtKB/TrEMBL
  A0A4D6YMV4_RAT UniProtKB/TrEMBL
  A0A4D6YNR9_RAT UniProtKB/TrEMBL
  A0A4D6YW90_RAT UniProtKB/TrEMBL
  A6IDF5 ENTREZGENE, UniProtKB/TrEMBL
  G3V6D4 ENTREZGENE, UniProtKB/TrEMBL
  P51672 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-08 Xcl1  X-C motif chemokine ligand 1  Xcl1  chemokine (C motif) ligand 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Xcl1  chemokine (C motif) ligand 1    small inducible cytokine subfamily C, member 1 (lymphotactin)  Name updated 1299863 APPROVED
2004-09-10 Xcl1  small inducible cytokine subfamily C, member 1 (lymphotactin)  Scyc1    Symbol and Name updated 1299863 APPROVED
2002-08-07 Scyc1  small inducible cytokine subfamily C, member 1 (lymphotactin)      Symbol and Name status set to provisional 70820 PROVISIONAL