Tti1 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 3 | 167,058,985 - 167,102,858 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 3 | 167,058,998 - 167,086,729 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 3 | 146,639,048 - 146,682,945 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 146,639,054 - 146,682,847 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 3 | 150,464,371 - 150,492,116 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 158,964,194 - 158,991,844 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 156,705,217 - 156,733,035 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 154,463,108 - 154,506,955 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 154,463,109 - 154,490,851 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 161,097,327 - 161,140,923 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 3 | 148,692,148 - 148,720,469 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 3 | 145,340,171 - 145,367,915 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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TTI1 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 20 | 37,983,021 - 38,033,456 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 37,983,007 - 38,033,461 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 20 | 36,611,423 - 36,661,858 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 36,044,837 - 36,095,247 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 20 | 33,318,467 - 33,368,903 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.23 | NCBI | | | | | HuRef | 20 | 33,347,165 - 33,397,600 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 36,514,470 - 36,564,872 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 39,707,342 - 39,757,800 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tti1 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 2 | 157,823,723 - 157,870,382 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 157,823,723 - 157,870,353 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 2 | 157,981,803 - 158,028,475 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 157,981,803 - 158,028,433 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 2 | 157,807,539 - 157,835,096 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 157,673,244 - 157,700,799 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 163,922,634 - 163,950,166 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 78.68 | NCBI | | | | |
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Tti1 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955445 | 18,675,434 - 18,729,512 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955445 | 18,676,285 - 18,729,512 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TTI1 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 21 | 43,709,800 - 43,760,444 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 43,702,884 - 43,753,457 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 34,304,137 - 34,354,615 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 35,417,502 - 35,467,918 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 35,417,502 - 35,467,918 (-) | Ensembl | | | panPan2 | panpan1.1 |
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TTI1 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 24 | 26,505,913 - 26,552,418 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 26,506,498 - 26,535,725 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 26,151,500 - 26,198,061 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 27,202,324 - 27,248,908 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 27,202,331 - 27,248,813 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 24 | 26,476,921 - 26,523,470 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 26,584,469 - 26,630,999 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 27,072,266 - 27,119,024 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Tti1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024408640 | 175,396,001 - 175,446,316 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936561 | 3,303,212 - 3,354,294 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936561 | 3,303,258 - 3,353,487 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TTI1 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 17 | 41,047,411 - 41,078,506 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 41,047,408 - 41,094,038 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 46,462,966 - 46,508,058 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TTI1 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 2 | 25,717,089 - 25,768,128 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 25,717,118 - 25,768,610 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666050 | 74,564,857 - 74,615,919 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tti1 (Heterocephalus glaber - naked mole-rat) |
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Tti1 (Rattus rattus - black rat) |
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