Insul6 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Insul6 (Insulin level QTL 6) Rattus norvegicus

Symbol: Insul6
Name: Insulin level QTL 6
RGD ID: 1582213
Previously known as: Insulin (dex, ln)
Trait: blood insulin amount   (VT:0001560)    
Measurement Type: calculated serum insulin level   (CMO:0000359)    
LOD Score: 3.7
P Value: 9.0E-4
Variance: 13.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr83155,759,447 - 189,428,310RGD_MAPPER_PIPELINE
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Dynamic genetic architecture of metabolic syndrome attributes in the rat. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.
Related QTLs

Related QTL Description Reference
Sffal1 interacts with RGD:1580752


Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Flank 1: (D3Rat213)
Rat AssemblyChrPosition (strand)Source
SHRSP x BN Map367.6099UniSTS
SHRSP x BN Map367.6099RGD
Peak: (D3Rat143)
Rat AssemblyChrPosition (strand)Source
GRCr83178,259,315 - 178,259,579 (+)Marker Load Pipeline
RH 3.4 Map31485.5RGD
RH 3.4 Map31485.5UniSTS
SHRSP x BN Map378.8599UniSTS
SHRSP x BN Map378.8599RGD
Flank 2: (D3Rat143)
Rat AssemblyChrPosition (strand)Source
GRCr83178,259,315 - 178,259,579 (+)Marker Load Pipeline
RH 3.4 Map31485.5RGD
RH 3.4 Map31485.5UniSTS
SHRSP x BN Map378.8599UniSTS
SHRSP x BN Map378.8599RGD


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general dexamethasone (DEX) was given in drinking water (0.026mg/ml) for 3 days and insulin level was determined using a RIA kit 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test; linkage analysis was done on logarithm-transformed values 1580752