Strain Report - Rat Genome Database

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Strain: SS.LEW-(D7Rat73-D7Rat128)/Ayd

Symbol: SS.LEW-(D7Rat73-D7Rat128)/Ayd
Strain: SS.LEW-(D7Rat73-D7Rat128)
Substrain: Ayd
RGD ID: 4891048
Citation ID: RRID:RGD_4891048
Ontology ID: RS:0000211
Alleles: Avpr1a;   Cyp11b1;   Cyp11b2;   Tac3;   Cyp11b3;   Cox6c;   Kcnv1;   Kcns2;   Nxph4;   Trhr
Also Known As: SS.LEW-(D7Uia3-D7Mgh1)/Ayd; SS.LEW-(D7Uia3-D7Mgh1)/Ayd; SS.LEW-(D7Rat73-D7Rat128)/Ayd; DSS.Lewis-(D7Rat73-D7Rat128)/Lt; C7S.L
Type: congenic
Available Source: Not Available
Origination: Research Centre, Centre Hospitalier de l'Universite de Monteal (CHUM), Quebec, Canada
Description: SS/Jr and LEW/Crlc were backcrossed for 5 generations, then BC5 rat was mated with LEW/Crlc to produce the desired congenic strain
Last Known Status: Unknown
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2753,612,714 - 114,528,048RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0761,047,589 - 124,246,733RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0761,044,919 - 124,236,725RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4757,326,196 - 121,524,220RGD_MAPPER_PIPELINERGSC3.4

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure


References - curated
# Reference Title Reference Citation
1. Modularization and epistatic hierarchy determine homeostatic actions of multiple blood pressure quantitative trait loci. Chauvet C, etal., Hum Mol Genet. 2013 Nov 15;22(22):4451-9. doi: 10.1093/hmg/ddt294. Epub 2013 Jun 28.
2. Normotension in Lewis and Dahl salt-resistant rats is governed by different genes. Crespo K, etal., J Hypertens. 2011 Mar;29(3):460-5.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines


Position Markers

Flank 1 / 1 (D7Rat73)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2753,612,714 - 53,612,950 (+)MAPPER
Rnor_6.0761,047,589 - 61,047,824NCBI
Rnor_5.0761,044,919 - 61,045,154UniSTS
RGSC_v3.4757,326,197 - 57,326,432UniSTS
RGSC_v3.4757,326,196 - 57,326,584RGD
RGSC_v3.1757,346,927 - 57,347,162RGD
Celera750,381,645 - 50,381,880UniSTS
RH 3.4 Map7487.7RGD
RH 3.4 Map7487.7UniSTS
RH 2.0 Map7413.2RGD
SHRSP x BN Map733.28RGD
FHH x ACI Map732.32RGD
Cytogenetic Map7q22UniSTS

Flank 2 / 1 (D7Rat128)
Rat AssemblyChrPosition (strand)Source
mRatBN7.27114,527,811 - 114,528,048 (+)MAPPER
Rnor_6.07124,246,491 - 124,246,733NCBI
Rnor_5.07124,236,483 - 124,236,725UniSTS
RGSC_v3.47121,523,977 - 121,524,220RGD
RGSC_v3.47121,523,978 - 121,524,220UniSTS
RGSC_v3.17121,558,207 - 121,558,450RGD
Celera7110,841,297 - 110,841,485UniSTS
SHRSP x BN Map766.86RGD
SHRSP x BN Map766.86UniSTS
Cytogenetic Map7q34UniSTS

Additional Information