Opfaq2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Opfaq2_m (open field activity QTL 2 (mouse)) Mus musculus

Symbol: Opfaq2_m
Name: open field activity QTL 2 (mouse)
RGD ID: 12903995
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39430,343,419 - 33,824,057MOUSEQTLGRCm39
GRCm38430,343,419 - 33,824,057MOUSEQTLGRCm38
cM Map4syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
Additional References at PubMed
PMID:25236452  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
329962085LOC131339427STARR-seq mESC enhancer starr_0983543044226630443126Mouse
16074114930556G01RikRIKEN cDNA 4930556G01 gene43066459630855744Mouse
2312121Gm11920predicted gene 1192043070196430702606Mouse
329962158LOC131339428STARR-seq mESC enhancer starr_0983643073416830735513Mouse
329963962LOC131339429STARR-seq mESC enhancer starr_0983743077731130778844Mouse
329969122LOC131339430STARR-seq mESC enhancer starr_0983843078004030781631Mouse
329967083LOC131339431STARR-seq mESC enhancer starr_0983943101167831012615Mouse
329967595LOC131339432STARR-seq mESC enhancer starr_0984043104481631045792Mouse
14998147Gm25705predicted gene, 2570543117490931175012Mouse
9616678Gm32173predicted gene, 3217343132409331332994Mouse
401840427LOC132409964STARR-positive B cell enhancer mm9_chr4:31281255-3128155643135410531354406Mouse
329964560LOC131339433STARR-seq mESC enhancer starr_0984143135436131355718Mouse
5145832Gm11922predicted gene 1192243138043431380964Mouse
329966708LOC131339434STARR-seq mESC enhancer starr_0984243142237431423062Mouse
10004221Gm42315predicted gene, 4231543150750531561807Mouse
329963378LOC131339435STARR-seq mESC enhancer starr_0984343162739131628650Mouse
329966076LOC131339436STARR-seq mESC enhancer starr_0984543170989631710803Mouse
329967328LOC131339437STARR-seq mESC enhancer starr_0984643175883231759860Mouse
9635232Gm32412predicted gene, 3241243182205531835444Mouse
329966579LOC131339438STARR-seq mESC enhancer starr_0984843182552431827517Mouse
329962847LOC131339439STARR-seq mESC enhancer starr_0984943194123131942500Mouse
1319783Map3k7mitogen-activated protein kinase kinase kinase 743196365932023470Mouse
401840040LOC132409965STARR-positive B cell enhancer ABC_E615643196387531964176Mouse
329968149LOC131339440STARR-seq mESC enhancer starr_0985143196941531971340Mouse
329962224LOC131339441STARR-seq mESC enhancer starr_0985343197501131976227Mouse
15001354Gm26254predicted gene, 2625443199858631998741Mouse
329968461LOC131339442STARR-seq mESC enhancer starr_0985443202360132025274Mouse
2310676Gm11927predicted gene 1192743205171332052989Mouse
401839487LOC132409966STARR-positive B cell enhancer ABC_E795843205527232055573Mouse
401834443LOC132409967STARR-positive B cell enhancer ABC_E1022843205708632057386Mouse
10037139Gm42266predicted gene, 4226643215697832186792Mouse
329965448LOC131339443STARR-seq mESC enhancer starr_0985543215809832159360Mouse
163683415LOC128924948CapStarr-seq enhancer MGSCv37_chr4:32251946-3225219143216497132165216Mouse
329963098LOC131339444STARR-seq mESC enhancer starr_0985743216589632166784Mouse
329966854LOC131339445STARR-seq mESC enhancer starr_0985843217613032177484Mouse
2295660Gm11929predicted gene 1192943220712732208225Mouse
7488780n-TGccc3nuclear encoded tRNA glycine 3 (anticodon CCC)43223025032230320Mouse
1621642Bach2BTB and CNC homology, basic leucine zipper transcription factor 243223841332586109Mouse
401840009LOC132409968STARR-positive B cell enhancer ABC_E461543224830632248607Mouse
401838161LOC132409969STARR-positive B cell enhancer ABC_E795943225072532251026Mouse
163665069LOC128924949CapStarr-seq enhancer MGSCv37_chr4:32345161-3234534443225818632258369Mouse
39128440LOC109279988VISTA enhancer mm72043230190332305410Mouse
401833558LOC132409970STARR-positive B cell enhancer ABC_E796043233565532336064Mouse
401839360LOC132409971STARR-positive B cell enhancer ABC_E1171343235862432358924Mouse
401838239LOC132409972STARR-positive B cell enhancer ABC_E615743235919832359499Mouse
401840518LOC132409973STARR-positive B cell enhancer ABC_E163943237340732373708Mouse
401834286LOC132409974STARR-positive B cell enhancer mm9_chr4:32478184-3247848543239120932391510Mouse
329968930LOC131339446STARR-seq mESC enhancer starr_0986443249869432502260Mouse
39130690LOC110120383VISTA enhancer mm51043253039632532759Mouse
2292341Bach2osBTB and CNC homology 2, opposite strand43255968032571662Mouse
163660139LOC128924950CapStarr-seq enhancer MGSCv37_chr4:32647355-3264753843256038032560563Mouse
329969165LOC131339447STARR-seq mESC enhancer starr_0986543257101232572054Mouse
401835798LOC132409975STARR-positive B cell enhancer ABC_E615843258831632588617Mouse
1332573Gja10gap junction protein, alpha 1043259459532607382Mouse
329969550LOC131339448STARR-seq mESC enhancer starr_0986643261478332616486Mouse
1314006Casp8ap2caspase 8 associated protein 243261546232653271Mouse
1314986Mdn1midasin AAA ATPase 143265686732775217Mouse
10019018Gm42267predicted gene, 4226743279126332792684Mouse
1617427Lyrm2LYR motif containing 243280025932802268Mouse
1317570Ankrd6ankyrin repeat domain 643280402732950884Mouse
163691156LOC128924951CapStarr-seq enhancer MGSCv37_chr4:32951659-3295186043286468432864885Mouse
329965248LOC131339449STARR-seq mESC enhancer starr_0987143289000932893774Mouse
14997402Gm11941predicted gene 1194143289254632893164Mouse
163697190LOC128924952CapStarr-seq enhancer MGSCv37_chr4:32993701-3299391643290672632906941Mouse
329968091LOC131339450STARR-seq mESC enhancer starr_0987643293861132941700Mouse
2295641Gm11942predicted gene 1194243296480632965273Mouse
329962491LOC131339451STARR-seq mESC enhancer starr_0987743296854032970305Mouse
163662419LOC128924953CapStarr-seq enhancer MGSCv37_chr4:33069120-3306932143298214532982346Mouse
163657596LOC128924954CapStarr-seq enhancer MGSCv37_chr4:33069732-3306984143298275732982866Mouse
1320661RragdRas-related GTP binding D43298299833022180Mouse
163684163LOC128924955STARR-seq mESC enhancer starr_0987843298434332986538Mouse
329964282LOC131339452STARR-seq mESC enhancer starr_0988043299541232996774Mouse
16097984933421O10RikRIKEN cDNA 4933421O10 gene43302713933031323Mouse
1312878Ube2j1ubiquitin-conjugating enzyme E2J 143303138033052367Mouse
2311744Btf3-ps8basic transcription factor 3, pseudogene 843305383833055751Mouse
62195Gabrr2gamma-aminobutyric acid type A receptor subunit rho 243305771533095865Mouse
163697639LOC128924956CapStarr-seq enhancer MGSCv37_chr4:33159852-3316005343307287733073078Mouse
62193Gabrr1gamma-aminobutyric acid type A receptor subunit rho 143313255633163606Mouse
1619808Pm20d2peptidase M20 domain containing 243317030933189732Mouse
329968285LOC131339453STARR-seq mESC enhancer starr_0988243317975133182530Mouse
5138318Gm11930predicted gene 1193043320176433202070Mouse
1621249Srsf12serine and arginine-rich splicing factor 1243320899133233344Mouse
1617426Pnrc1proline-rich nuclear receptor coactivator 143324542333248787Mouse
401837029LOC132409976STARR-positive B cell enhancer ABC_E923543324765033247950Mouse
401837993LOC132409977STARR-positive B cell enhancer ABC_E615943324852033248821Mouse
329968173LOC131339454STARR-seq mESC enhancer starr_0988943326889533271546Mouse
329966084LOC131339455STARR-seq mESC enhancer starr_0989043327168233274496Mouse
329963317LOC131339456STARR-seq mESC enhancer starr_0989243330036333302964Mouse
401833715LOC132409978STARR-positive B cell enhancer ABC_E83343331001433310315Mouse
1553727RngttRNA guanylyltransferase and 5'-phosphatase43331030033502610Mouse
329968286LOC131339457STARR-seq mESC enhancer starr_0989443333686733339102Mouse
329969260LOC131339458STARR-seq mESC enhancer starr_0989543337443533375948Mouse
329969561LOC131339459STARR-seq mESC enhancer starr_0989743341880833420111Mouse
9599380Mir8118microRNA 811843343808133438209Mouse
15018383Gm52726predicted gene, 5272643350957133521221Mouse
329965966LOC131339460STARR-seq mESC enhancer starr_0990043354428733545806Mouse
9676380Gm32893predicted gene, 3289343356824833579350Mouse
9624164Gm32955predicted gene, 3295543360286633630497Mouse
329962691LOC131339461STARR-seq mESC enhancer starr_0990343363459433636365Mouse
14996650Gm24341predicted gene, 2434143368136733681491Mouse
9673168Gm33059predicted gene, 3305943378098033839079Mouse
9603399Gm33008predicted gene, 3300843379899133801048Mouse
329965235LOC131339462STARR-seq mESC enhancer starr_0990443382328233824874Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301203Alcp8_malcohol preference locus 8 (mouse)Not determined41739516051395290Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
10401115Pgia35_mproteoglycan induced arthritis 35 (mouse)Not determined41256237746562509Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
4141555Nbwa2_mNZB and NZW autoimmunity 2 (mouse)Not determined41789251551892635Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
12880405Jcdq1_mjoint cartilage degeneration QTL 1 (mouse)41256237746562509Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
1301697Sluc18_msusceptibility to lung cancer 18 (mouse)Not determined42237344856373612Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
25440481Moaq1_mmodifier of alien QTL 1 (mouse)41950000046000000Mouse
1301237Alcp7_malcohol preference locus 7 (mouse)Not determined41739516051395290Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
1302075Bdln6_mbody length 6 (mouse)Not determined42237344856373612Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
1301437Scon1_msucrose consumption 1 (mouse)Not determined42237344856373612Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1300769Pcyts2_mplasmacytoma susceptibility 2 (mouse)Not determined42211194456112145Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
1302058Hrtfm3_mheart failure modifier 3 (mouse)Not determined42211194456112145Mouse
1302184Aaom1_mautoimmune aoritis in MRL mice 1 (mouse)Not determined42432229946332776Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse
12903995Opfaq2_mopen field activity QTL 2 (mouse)43034341933824057Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:5888675 MouseQtl