stm95tctg-3B Marker Search Result - Rat Genome Database

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Marker: stm95tctg-3B

Symbol: stm95tctg-3B
Previously known as:
RGD ID: 7206420
Expected Size: 1077 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27115,117,948 - 115,119,025 (+)MAPPERmRatBN7.2
mRatBN7.2883,746,907 - 83,748,601 (+)MAPPERmRatBN7.2
Rnor_6.0890,358,704 - 90,360,397NCBIRnor6.0
Rnor_6.07124,858,703 - 124,859,779NCBIRnor6.0
Rnor_5.0889,886,969 - 89,888,662UniSTSRnor5.0
Rnor_5.07124,846,736 - 124,847,812UniSTSRnor5.0
Celera7111,426,275 - 111,427,351UniSTS
Cytogenetic Map7q34UniSTS
Is Marker For: Genes:   Efcab6  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CATGCAGTCAGCCTCTTGGC
Reverse Primer TCTCTCTCTCTCTCTGTGTGTG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1305012Irak1bp1interleukin-1 receptor-associated kinase 1 binding protein 188373151283748289Rat
1309065Efcab6EF-hand calcium binding domain 67115018971115200121Rat


1 to 10 of 125 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)84329616998968765Rat
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)854259986100382532Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)83018886794457446Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)84329616998968765Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)84329616998968765Rat

1 to 10 of 125 rows


Database
Acc Id
Source(s)
NCBI Gene 315179 UniSTS