RH142039 Marker Search Result - Rat Genome Database

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Marker: RH142039

Symbol: RH142039
Previously known as: AI556075; 
RGD ID: 5081230
Expected Size: 166 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21757,318,045 - 57,318,211 (+)MAPPERmRatBN7.2
Rnor_6.01763,002,646 - 63,002,811NCBIRnor6.0
Rnor_6.01762,265,109 - 62,265,274NCBIRnor6.0
Rnor_5.01764,774,638 - 64,774,803UniSTSRnor5.0
Rnor_5.01764,038,864 - 64,039,029UniSTSRnor5.0
RGSC_v3.41765,971,719 - 65,971,884UniSTSRGSC3.4
Celera1758,598,529 - 58,598,694UniSTS
RH 3.4 Map17589.4UniSTS
Cytogenetic Map17q12.1UniSTS
Is Marker For: Genes:   Fzd8   LOC100909849  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TTTGCTAACAGTTCAAGAATTAGAGG
Reverse Primer AAATGATTTAAGTACTACCCTGTCCC
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1560525Fzd8frizzled class receptor 8175731292457320551Rat
RefSeq Transcripts XM_003751721.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JH619052.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 53 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
7411575Bw140Body weight QTL 14030.20.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
1354654Spl7Serum phospholipid level QTL 75.5blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)175089090860781592Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174054004180387013Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat
1354629Scl31Serum cholesterol level QTL 314.1blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)175089090860781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1600398Edcs5Endometrial carcinoma susceptibility QTL 52.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)175724672370852846Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat

1 to 10 of 53 rows


Database
Acc Id
Source(s)
NCBI Gene 100909849 UniSTS
  364754 UniSTS