RH94390 Marker Search Result - Rat Genome Database

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Marker: RH94390

Symbol: RH94390
Previously known as: Ckm; M10140; 
RGD ID: 5069967
Expected Size: 98 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2179,071,612 - 79,071,710 (+)MAPPERmRatBN7.2
Rnor_6.0180,331,733 - 80,331,830NCBIRnor6.0
Rnor_5.0181,598,005 - 81,598,102UniSTSRnor5.0
RGSC_v3.4178,772,574 - 78,772,671UniSTSRGSC3.4
Celera173,533,873 - 73,533,970UniSTS
RH 3.4 Map1787.5UniSTS
Cytogenetic Map5q36UniSTS
Cytogenetic Map1q21UniSTS
Is Marker For: Genes:   Ckm   Hp1bp3   Ppp1r13l  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TGGCCAATGAGAACCTGC
Reverse Primer CGYACTTTTATTTAAGGCAGGG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2358Ckmcreatine kinase, M-type17906139079071721Rat

1 to 26 of 26 rows
RefSeq Transcripts NM_012530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC062058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M10140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M14864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 26 of 26 rows


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15389511782174945Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat

1 to 10 of 47 rows


Database
Acc Id
Source(s)
NCBI Gene 24265 UniSTS
  313647 UniSTS
  686781 UniSTS